RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 AEBP1Q8IUX7 1158 aa28.98■■■□□ 2.23
CCDC47-204ENST00000582252 CFAP44Q96MT7 982 aa28.98■■■□□ 2.23
CCDC47-204ENST00000582252 COL22A1Q8NFW1 1626 aaPredicted RBP28.97■■■□□ 2.23
CCDC47-204ENST00000582252 MVPQ14764 893 aaKnown RBP28.96■■■□□ 2.23
CCDC47-204ENST00000582252 CABLES1Q8TDN4 633 aa28.96■■■□□ 2.23
CCDC47-204ENST00000582252 KDRP35968 1356 aa28.96■■■□□ 2.23
CCDC47-204ENST00000582252 BRPF1P55201 1214 aaPredicted RBP28.95■■■□□ 2.23
CCDC47-204ENST00000582252 CPDO75976 1380 aa28.95■■■□□ 2.23
CCDC47-204ENST00000582252 RGPD5Q99666 1765 aa28.95■■■□□ 2.22
CCDC47-204ENST00000582252 ATF7IPQ6VMQ6 1270 aa28.94■■■□□ 2.22
CCDC47-204ENST00000582252 IGSF1Q8N6C5 1336 aa28.94■■■□□ 2.22
CCDC47-204ENST00000582252 ZBTB7CA1YPR0 619 aa28.94■■■□□ 2.22
CCDC47-204ENST00000582252 RLBP1P12271 317 aa28.94■■■□□ 2.22
CCDC47-204ENST00000582252 THUMPD2Q9BTF0 503 aaKnown RBP28.94■■■□□ 2.22
CCDC47-204ENST00000582252 COL18A1P39060 1754 aa28.94■■■□□ 2.22
CCDC47-204ENST00000582252 ZC3H6P61129 1189 aaKnown RBP28.93■■■□□ 2.22
CCDC47-204ENST00000582252 MBIPQ9NS73 344 aa28.92■■■□□ 2.22
CCDC47-204ENST00000582252 HAP1P54257 671 aaPredicted RBP28.91■■■□□ 2.22
CCDC47-204ENST00000582252 TRIM27P14373 513 aa28.9■■■□□ 2.22
CCDC47-204ENST00000582252 NOB1Q9ULX3 412 aaKnown RBP28.9■■■□□ 2.22
CCDC47-204ENST00000582252 DDX19BQ9UMR2 479 aa28.9■■■□□ 2.22
CCDC47-204ENST00000582252 GAS2L2Q8NHY3 880 aa28.89■■■□□ 2.21
CCDC47-204ENST00000582252 TNNQ9UQP3 1299 aa28.89■■■□□ 2.21
CCDC47-204ENST00000582252 KIAA0232Q92628 1395 aa28.88■■■□□ 2.21
CCDC47-204ENST00000582252 VAMP4O75379 141 aa28.88■■■□□ 2.21
CCDC47-204ENST00000582252 EYA1Q99502 592 aa28.88■■■□□ 2.21
CCDC47-204ENST00000582252 FAM83GA6ND36 823 aa28.87■■■□□ 2.21
CCDC47-204ENST00000582252 PDE4AP27815 886 aa28.87■■■□□ 2.21
CCDC47-204ENST00000582252 RGPD2P0DJD1 1756 aa28.86■■■□□ 2.21
CCDC47-204ENST00000582252 FAM208AQ9UK61 1670 aaKnown RBP28.86■■■□□ 2.21
CCDC47-204ENST00000582252 TWISTNBQ3B726 338 aaPredicted RBP28.86■■■□□ 2.21
CCDC47-204ENST00000582252 RTF1Q92541 710 aaKnown RBP28.85■■■□□ 2.21
CCDC47-204ENST00000582252 ARHGAP45Q92619 1136 aa28.85■■■□□ 2.21
CCDC47-204ENST00000582252 LTV1Q96GA3 475 aaPredicted RBP28.85■■■□□ 2.21
CCDC47-204ENST00000582252 BACH2Q9BYV9 841 aa28.85■■■□□ 2.21
CCDC47-204ENST00000582252 RWDD1Q9H446 243 aaPredicted RBP28.84■■■□□ 2.21
CCDC47-204ENST00000582252 IGHDP01880 384 aa28.83■■■□□ 2.21
CCDC47-204ENST00000582252 DCTN1Q14203 1278 aa28.83■■■□□ 2.21
CCDC47-204ENST00000582252 CHMP4BQ9H444 224 aaKnown RBP28.83■■■□□ 2.21
CCDC47-204ENST00000582252 ANP32AP39687 249 aaKnown RBP28.83■■■□□ 2.21
CCDC47-204ENST00000582252 ITPRIPQ8IWB1 547 aa28.83■■■□□ 2.21
CCDC47-204ENST00000582252 LMO7Q8WWI1 1683 aa28.82■■■□□ 2.2
CCDC47-204ENST00000582252 CAMTA1Q9Y6Y1 1673 aa28.82■■■□□ 2.2
CCDC47-204ENST00000582252 HTATSF1O43719 755 aaKnown RBP28.82■■■□□ 2.2
CCDC47-204ENST00000582252 PRDM11Q9NQV5 511 aa28.82■■■□□ 2.2
CCDC47-204ENST00000582252 AXIN2Q9Y2T1 843 aa28.82■■■□□ 2.2
CCDC47-204ENST00000582252 MRPL50Q8N5N7 158 aaKnown RBP28.81■■■□□ 2.2
CCDC47-204ENST00000582252 ANKRD24Q8TF21 1146 aa28.81■■■□□ 2.2
CCDC47-204ENST00000582252 ERBB3P21860 1342 aa28.81■■■□□ 2.2
CCDC47-204ENST00000582252 CHL1O00533 1208 aa28.8■■■□□ 2.2
CCDC47-204ENST00000582252 MTHFSDQ2M296 383 aaKnown RBP28.8■■■□□ 2.2
CCDC47-204ENST00000582252 CHRNA2Q15822 529 aa28.79■■■□□ 2.2
CCDC47-204ENST00000582252 TSPYL6Q8N831 410 aa28.79■■■□□ 2.2
CCDC47-204ENST00000582252 PCDHB15Q9Y5E8 787 aa28.78■■■□□ 2.2
CCDC47-204ENST00000582252 CRB1P82279 1406 aa28.77■■■□□ 2.2
CCDC47-204ENST00000582252 MCM10Q7L590 875 aa28.77■■■□□ 2.2
CCDC47-204ENST00000582252 TMEM57Q8N5G2 664 aa28.77■■■□□ 2.2
CCDC47-204ENST00000582252 C8orf58Q8NAV2 365 aa28.77■■■□□ 2.2
CCDC47-204ENST00000582252 NCAPD2Q15021 1401 aa28.76■■■□□ 2.19
CCDC47-204ENST00000582252 COL14A1Q05707 1796 aaKnown RBP28.76■■■□□ 2.19
CCDC47-204ENST00000582252 LRRC37A3O60309 1634 aa28.75■■■□□ 2.19
CCDC47-204ENST00000582252 NBPF6Q5VWK0 638 aa28.74■■■□□ 2.19
CCDC47-204ENST00000582252 SKAP1Q86WV1 359 aa28.74■■■□□ 2.19
CCDC47-204ENST00000582252 NBPF4Q96M43 638 aa28.74■■■□□ 2.19
CCDC47-204ENST00000582252 API5Q9BZZ5 524 aaKnown RBP28.74■■■□□ 2.19
CCDC47-204ENST00000582252 ELL2O00472 640 aaPredicted RBP28.73■■■□□ 2.19
CCDC47-204ENST00000582252 RGS3P49796 1198 aa28.73■■■□□ 2.19
CCDC47-204ENST00000582252 FAM161AQ3B820 660 aa28.73■■■□□ 2.19
CCDC47-204ENST00000582252 JCADQ9P266 1359 aa28.72■■■□□ 2.19
CCDC47-204ENST00000582252 GNAT3A8MTJ3 354 aa28.71■■■□□ 2.19
CCDC47-204ENST00000582252 HDAC1Q13547 482 aaPredicted RBP28.71■■■□□ 2.19
CCDC47-204ENST00000582252 COL5A2P05997 1499 aaPredicted RBP28.71■■■□□ 2.19
CCDC47-204ENST00000582252 MAP3K5Q99683 1374 aa28.7■■■□□ 2.18
CCDC47-204ENST00000582252 CSB-PGBD3P0DP91 1061 aa28.69■■■□□ 2.18
CCDC47-204ENST00000582252 ZBTB40Q9NUA8 1239 aa28.69■■■□□ 2.18
CCDC47-204ENST00000582252 USHBP1Q8N6Y0 703 aa28.69■■■□□ 2.18
CCDC47-204ENST00000582252 ABCC4O15439 1325 aa28.68■■■□□ 2.18
CCDC47-204ENST00000582252 VIRMAQ69YN4 1812 aaKnown RBP28.68■■■□□ 2.18
CCDC47-204ENST00000582252 TSPYL4Q9UJ04 414 aa28.68■■■□□ 2.18
CCDC47-204ENST00000582252 ERICH6Q7L0X2 663 aa28.66■■■□□ 2.18
CCDC47-204ENST00000582252 BABAM1Q9NWV8 329 aa28.66■■■□□ 2.18
CCDC47-204ENST00000582252 WDR17Q8IZU2 1322 aa28.66■■■□□ 2.18
CCDC47-204ENST00000582252 NLRP2Q9NX02 1062 aa28.66■■■□□ 2.18
CCDC47-204ENST00000582252 PLCH1Q4KWH8 1693 aa28.65■■■□□ 2.18
CCDC47-204ENST00000582252 MSH5O43196 834 aa28.64■■■□□ 2.18
CCDC47-204ENST00000582252 SOS1Q07889 1333 aaPredicted RBP28.63■■■□□ 2.17
CCDC47-204ENST00000582252 IPO9Q96P70 1041 aaKnown RBP28.63■■■□□ 2.17
CCDC47-204ENST00000582252 PTPRCP08575 1304 aa28.62■■■□□ 2.17
CCDC47-204ENST00000582252 PDZRN3Q9UPQ7 1066 aa28.62■■■□□ 2.17
CCDC47-204ENST00000582252 PLEKHG2Q9H7P9 1386 aa28.61■■■□□ 2.17
CCDC47-204ENST00000582252 NWD2Q9ULI1 1742 aa28.61■■■□□ 2.17
CCDC47-204ENST00000582252 HSPA1LP34931 641 aa28.6■■■□□ 2.17
CCDC47-204ENST00000582252 EVA1CP58658 441 aa28.6■■■□□ 2.17
CCDC47-204ENST00000582252 C8orf34Q49A92 452 aa28.6■■■□□ 2.17
CCDC47-204ENST00000582252 BTG4Q9NY30 223 aa28.6■■■□□ 2.17
CCDC47-204ENST00000582252 SPATA31A6Q5VVP1 1343 aa28.59■■■□□ 2.17
CCDC47-204ENST00000582252 NUTM2BA6NNL0 878 aaPredicted RBP28.59■■■□□ 2.17
CCDC47-204ENST00000582252 NUTM2EB1AL46 878 aaPredicted RBP28.59■■■□□ 2.17
CCDC47-204ENST00000582252 ZBTB7BO15156 539 aaPredicted RBP28.59■■■□□ 2.17
CCDC47-204ENST00000582252 ADAMTS2O95450 1211 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms