RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 ATP1A2P50993 1020 aa13.49□□□□□ -0.25
CDH8-207ENST00000582242 OGFOD1Q8N543 542 aa13.49□□□□□ -0.25
CDH8-207ENST00000582242 WNT7BP56706 349 aa13.48□□□□□ -0.25
CDH8-207ENST00000582242 CLDN10P78369 228 aa13.48□□□□□ -0.25
CDH8-207ENST00000582242 ANKMY2Q8IV38 441 aa13.48□□□□□ -0.25
CDH8-207ENST00000582242 CDCA7Q9BWT1 371 aaPredicted RBP13.48□□□□□ -0.25
CDH8-207ENST00000582242 FOXC1Q12948 553 aa13.47□□□□□ -0.25
CDH8-207ENST00000582242 FAM200AQ8TCP9 573 aa13.47□□□□□ -0.25
CDH8-207ENST00000582242 VARSP26640 1264 aaKnown RBP13.46□□□□□ -0.25
CDH8-207ENST00000582242 OXLD1Q5BKU9 147 aa13.46□□□□□ -0.25
CDH8-207ENST00000582242 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
CDH8-207ENST00000582242 DNAAF2Q9NVR5 837 aaKnown RBP13.46□□□□□ -0.25
CDH8-207ENST00000582242 CD2BP2O95400 341 aaKnown RBP13.45□□□□□ -0.26
CDH8-207ENST00000582242 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
CDH8-207ENST00000582242 TMCO4Q5TGY1 634 aa13.45□□□□□ -0.26
CDH8-207ENST00000582242 MAP4K5Q9Y4K4 846 aa13.45□□□□□ -0.26
CDH8-207ENST00000582242 SKOR1P84550 965 aa13.44□□□□□ -0.26
CDH8-207ENST00000582242 SIX5Q8N196 739 aa13.44□□□□□ -0.26
CDH8-207ENST00000582242 GTF2IP78347 998 aa13.43□□□□□ -0.26
CDH8-207ENST00000582242 DPYDQ12882 1025 aa13.43□□□□□ -0.26
CDH8-207ENST00000582242 CLP1Q92989 425 aaKnown RBP13.43□□□□□ -0.26
CDH8-207ENST00000582242 ZNF775Q96BV0 537 aaPredicted RBP13.43□□□□□ -0.26
CDH8-207ENST00000582242 SIRT1Q96EB6 747 aa13.43□□□□□ -0.26
CDH8-207ENST00000582242 ZNF594Q96JF6 807 aaPredicted RBP13.43□□□□□ -0.26
CDH8-207ENST00000582242 DKK1O94907 266 aa13.42□□□□□ -0.26
CDH8-207ENST00000582242 SWI5Q1ZZU3 235 aa13.42□□□□□ -0.26
CDH8-207ENST00000582242 KCTD15Q96SI1 283 aaPredicted RBP13.42□□□□□ -0.26
CDH8-207ENST00000582242 TOR4AQ9NXH8 423 aa13.42□□□□□ -0.26
CDH8-207ENST00000582242 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
CDH8-207ENST00000582242 PCDHB11Q9Y5F2 797 aa13.42□□□□□ -0.26
CDH8-207ENST00000582242 IVNS1ABPQ9Y6Y0 642 aa13.42□□□□□ -0.26
CDH8-207ENST00000582242 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
CDH8-207ENST00000582242 ZBTB7BO15156 539 aaPredicted RBP13.41□□□□□ -0.26
CDH8-207ENST00000582242 USP4Q13107 963 aa13.41□□□□□ -0.26
CDH8-207ENST00000582242 AAASQ9NRG9 546 aa13.41□□□□□ -0.26
CDH8-207ENST00000582242 KIAA1024Q9UPX6 916 aa13.41□□□□□ -0.26
CDH8-207ENST00000582242 POTECB2RU33 542 aa13.4□□□□□ -0.26
CDH8-207ENST00000582242 ST8SIA5O15466 376 aa13.4□□□□□ -0.26
CDH8-207ENST00000582242 SLAIN2Q9P270 581 aa13.4□□□□□ -0.26
CDH8-207ENST00000582242 SSFA2P28290 1259 aa13.39□□□□□ -0.27
CDH8-207ENST00000582242 PHLDB3Q6NSJ2 640 aa13.39□□□□□ -0.27
CDH8-207ENST00000582242 PCDHGA11Q9Y5H2 935 aa13.39□□□□□ -0.27
CDH8-207ENST00000582242 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
CDH8-207ENST00000582242 AVPP01185 164 aa13.37□□□□□ -0.27
CDH8-207ENST00000582242 INTS6LQ5JSJ4 861 aaKnown RBP13.37□□□□□ -0.27
CDH8-207ENST00000582242 VASH1Q7L8A9 365 aaPredicted RBP13.37□□□□□ -0.27
CDH8-207ENST00000582242 SEC13P55735 322 aa13.36□□□□□ -0.27
CDH8-207ENST00000582242 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
CDH8-207ENST00000582242 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
CDH8-207ENST00000582242 EHBP1Q8NDI1 1231 aa13.36□□□□□ -0.27
CDH8-207ENST00000582242 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
CDH8-207ENST00000582242 TXNDC2Q86VQ3 553 aa13.35□□□□□ -0.27
CDH8-207ENST00000582242 CDK15Q96Q40 435 aa13.35□□□□□ -0.27
CDH8-207ENST00000582242 MPNDQ8N594 471 aa13.34□□□□□ -0.27
CDH8-207ENST00000582242 TPCN2Q8NHX9 752 aa13.34□□□□□ -0.27
CDH8-207ENST00000582242 RBM19Q9Y4C8 960 aaKnown RBP13.34□□□□□ -0.27
CDH8-207ENST00000582242 MYCP01106 439 aaPredicted RBP13.33□□□□□ -0.28
CDH8-207ENST00000582242 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
CDH8-207ENST00000582242 RAB15P59190 212 aa13.33□□□□□ -0.28
CDH8-207ENST00000582242 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
CDH8-207ENST00000582242 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDH8-207ENST00000582242 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
CDH8-207ENST00000582242 ERVH48-1M5A8F1 160 aa13.32□□□□□ -0.28
CDH8-207ENST00000582242 WNT7AO00755 349 aa13.32□□□□□ -0.28
CDH8-207ENST00000582242 PSME1Q06323 249 aa13.32□□□□□ -0.28
CDH8-207ENST00000582242 ARID4AP29374 1257 aaPredicted RBP13.3□□□□□ -0.28
CDH8-207ENST00000582242 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
CDH8-207ENST00000582242 C1orf216Q8TAB5 229 aa13.3□□□□□ -0.28
CDH8-207ENST00000582242 SFI1A8K8P3 1242 aa13.29□□□□□ -0.28
CDH8-207ENST00000582242 FSHRP23945 695 aa13.29□□□□□ -0.28
CDH8-207ENST00000582242 SCTRP47872 440 aa13.29□□□□□ -0.28
CDH8-207ENST00000582242 CTC1Q2NKJ3 1217 aa13.29□□□□□ -0.28
CDH8-207ENST00000582242 RGS22Q8NE09 1264 aa13.29□□□□□ -0.28
CDH8-207ENST00000582242 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
CDH8-207ENST00000582242 M0R2N6 131 aa13.28□□□□□ -0.28
CDH8-207ENST00000582242 GRM5P41594 1212 aa13.28□□□□□ -0.28
CDH8-207ENST00000582242 DHX9Q08211 1270 aaKnown RBP13.28□□□□□ -0.28
CDH8-207ENST00000582242 ARID5BQ14865 1188 aa13.28□□□□□ -0.28
CDH8-207ENST00000582242 DACH1Q9UI36 760 aa13.28□□□□□ -0.28
CDH8-207ENST00000582242 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.29
CDH8-207ENST00000582242 AXIN1O15169 862 aa13.27□□□□□ -0.29
CDH8-207ENST00000582242 SIAH2O43255 324 aa13.27□□□□□ -0.29
CDH8-207ENST00000582242 SMCPP49901 116 aaPredicted RBP13.27□□□□□ -0.29
CDH8-207ENST00000582242 OCLNQ16625 522 aa13.27□□□□□ -0.29
CDH8-207ENST00000582242 CC2D2BQ6DHV5 1058 aa13.27□□□□□ -0.29
CDH8-207ENST00000582242 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
CDH8-207ENST00000582242 TLL2Q9Y6L7 1015 aa13.27□□□□□ -0.29
CDH8-207ENST00000582242 ADH1CP00326 375 aa13.25□□□□□ -0.29
CDH8-207ENST00000582242 SNIP1Q8TAD8 396 aaKnown RBP13.25□□□□□ -0.29
CDH8-207ENST00000582242 CXXC1Q9P0U4 656 aaPredicted RBP13.25□□□□□ -0.29
CDH8-207ENST00000582242 ABCC9O60706 1549 aa13.24□□□□□ -0.29
CDH8-207ENST00000582242 PRMT3O60678 531 aa13.24□□□□□ -0.29
CDH8-207ENST00000582242 SMPD1P17405 629 aa13.24□□□□□ -0.29
CDH8-207ENST00000582242 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
CDH8-207ENST00000582242 MRGPRX2Q96LB1 330 aa13.24□□□□□ -0.29
CDH8-207ENST00000582242 OSBPL3Q9H4L5 887 aa13.24□□□□□ -0.29
CDH8-207ENST00000582242 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
CDH8-207ENST00000582242 MTMR7Q9Y216 660 aa13.23□□□□□ -0.29
CDH8-207ENST00000582242 NR5A1Q13285 461 aa13.22□□□□□ -0.29
CDH8-207ENST00000582242 TAS1R3Q7RTX0 852 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms