RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 TNS2Q63HR2 1409 aa26.81■■□□□ 1.88
TOP3A-213ENST00000582230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.8■■□□□ 1.88
TOP3A-213ENST00000582230 HMOX1P09601 288 aa26.79■■□□□ 1.88
TOP3A-213ENST00000582230 U2AF1L5P0DN76 240 aaPredicted RBP26.79■■□□□ 1.88
TOP3A-213ENST00000582230 U2AF1Q01081 240 aaKnown RBP eCLIP26.79■■□□□ 1.88
TOP3A-213ENST00000582230 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
TOP3A-213ENST00000582230 LRRC37A3O60309 1634 aa26.79■■□□□ 1.88
TOP3A-213ENST00000582230 SPG7Q9UQ90 795 aa26.78■■□□□ 1.88
TOP3A-213ENST00000582230 AMOTQ4VCS5 1084 aa26.76■■□□□ 1.87
TOP3A-213ENST00000582230 FCHSD2O94868 740 aa26.75■■□□□ 1.87
TOP3A-213ENST00000582230 MARCH10Q8NA82 808 aaPredicted RBP26.75■■□□□ 1.87
TOP3A-213ENST00000582230 PLEKHO1Q53GL0 409 aaPredicted RBP26.74■■□□□ 1.87
TOP3A-213ENST00000582230 FAM196AQ6ZSG2 479 aa26.74■■□□□ 1.87
TOP3A-213ENST00000582230 DDX54Q8TDD1 881 aaKnown RBP26.74■■□□□ 1.87
TOP3A-213ENST00000582230 BRWD3Q6RI45 1802 aa26.74■■□□□ 1.87
TOP3A-213ENST00000582230 PCDH11XQ9BZA7 1347 aa26.73■■□□□ 1.87
TOP3A-213ENST00000582230 PCDH11YQ9BZA8 1340 aa26.73■■□□□ 1.87
TOP3A-213ENST00000582230 RSPH6AQ9H0K4 717 aa26.72■■□□□ 1.87
TOP3A-213ENST00000582230 FAM182BQ5T319 152 aa26.71■■□□□ 1.87
TOP3A-213ENST00000582230 PNNQ9H307 717 aaKnown RBP26.71■■□□□ 1.87
TOP3A-213ENST00000582230 WDR43Q15061 677 aaKnown RBP eCLIP26.7■■□□□ 1.86
TOP3A-213ENST00000582230 BCL9O00512 1426 aa26.69■■□□□ 1.86
TOP3A-213ENST00000582230 PRKAR2BP31323 418 aa26.69■■□□□ 1.86
TOP3A-213ENST00000582230 MRS2Q9HD23 443 aa26.68■■□□□ 1.86
TOP3A-213ENST00000582230 CYP27B1O15528 508 aa26.67■■□□□ 1.86
TOP3A-213ENST00000582230 CCDC184Q52MB2 194 aa26.67■■□□□ 1.86
TOP3A-213ENST00000582230 IFNL2Q8IZJ0 200 aa26.67■■□□□ 1.86
TOP3A-213ENST00000582230 PKD1L3Q7Z443 1732 aa26.66■■□□□ 1.86
TOP3A-213ENST00000582230 NEFMP07197 916 aa26.65■■□□□ 1.86
TOP3A-213ENST00000582230 ZNF530Q6P9A1 599 aaPredicted RBP26.65■■□□□ 1.86
TOP3A-213ENST00000582230 PHKG2P15735 406 aa26.64■■□□□ 1.86
TOP3A-213ENST00000582230 NKX1-1Q15270 411 aaPredicted RBP26.63■■□□□ 1.85
TOP3A-213ENST00000582230 C1orf141Q5JVX7 400 aa26.63■■□□□ 1.85
TOP3A-213ENST00000582230 HSP90AB1P08238 724 aaKnown RBP26.62■■□□□ 1.85
TOP3A-213ENST00000582230 MTHFSDQ2M296 383 aaKnown RBP26.62■■□□□ 1.85
TOP3A-213ENST00000582230 CCDC125Q86Z20 511 aa26.62■■□□□ 1.85
TOP3A-213ENST00000582230 GAS2L2Q8NHY3 880 aa26.62■■□□□ 1.85
TOP3A-213ENST00000582230 PHACTR3Q96KR7 559 aa26.62■■□□□ 1.85
TOP3A-213ENST00000582230 ADAMTS8Q9UP79 889 aa26.62■■□□□ 1.85
TOP3A-213ENST00000582230 PNISRQ8TF01 805 aaKnown RBP26.61■■□□□ 1.85
TOP3A-213ENST00000582230 PLEKHF1Q96S99 279 aa26.61■■□□□ 1.85
TOP3A-213ENST00000582230 SHANK3Q9BYB0 1731 aa26.61■■□□□ 1.85
TOP3A-213ENST00000582230 CCER2I3L3R5 266 aa26.6■■□□□ 1.85
TOP3A-213ENST00000582230 AKAP4Q5JQC9 854 aa26.6■■□□□ 1.85
TOP3A-213ENST00000582230 TRIM37O94972 964 aa26.58■■□□□ 1.85
TOP3A-213ENST00000582230 UPF1Q92900 1129 aaKnown RBP eCLIP26.58■■□□□ 1.85
TOP3A-213ENST00000582230 DCAF5Q96JK2 942 aa26.58■■□□□ 1.85
TOP3A-213ENST00000582230 MAPK8IP3Q9UPT6 1336 aa26.58■■□□□ 1.85
TOP3A-213ENST00000582230 BCL11BQ9C0K0 894 aaPredicted RBP26.57■■□□□ 1.84
TOP3A-213ENST00000582230 SF3B2Q13435 895 aaKnown RBP26.55■■□□□ 1.84
TOP3A-213ENST00000582230 RUNDC1Q96C34 613 aa26.55■■□□□ 1.84
TOP3A-213ENST00000582230 ACSBG1Q96GR2 724 aa26.55■■□□□ 1.84
TOP3A-213ENST00000582230 MIER1Q8N108 512 aa26.54■■□□□ 1.84
TOP3A-213ENST00000582230 GNAT3A8MTJ3 354 aa26.53■■□□□ 1.84
TOP3A-213ENST00000582230 PRIM1P49642 420 aaKnown RBP26.53■■□□□ 1.84
TOP3A-213ENST00000582230 KCNQ2O43526 872 aa26.52■■□□□ 1.84
TOP3A-213ENST00000582230 MAP3K5Q99683 1374 aa26.52■■□□□ 1.84
TOP3A-213ENST00000582230 ERVV-2B6SEH9 535 aa26.51■■□□□ 1.83
TOP3A-213ENST00000582230 MPRIPQ6WCQ1 1025 aa26.51■■□□□ 1.83
TOP3A-213ENST00000582230 CCDC146Q8IYE0 955 aa26.51■■□□□ 1.83
TOP3A-213ENST00000582230 SYTL4Q96C24 671 aaPredicted RBP26.51■■□□□ 1.83
TOP3A-213ENST00000582230 NFE2L2Q16236 605 aa26.5■■□□□ 1.83
TOP3A-213ENST00000582230 HTATSF1O43719 755 aaKnown RBP26.49■■□□□ 1.83
TOP3A-213ENST00000582230 KDM6AO15550 1401 aaPredicted RBP26.48■■□□□ 1.83
TOP3A-213ENST00000582230 RTF1Q92541 710 aaKnown RBP26.48■■□□□ 1.83
TOP3A-213ENST00000582230 RNMTO43148 476 aaKnown RBP26.47■■□□□ 1.83
TOP3A-213ENST00000582230 APBA3O96018 575 aa26.47■■□□□ 1.83
TOP3A-213ENST00000582230 PTF1AQ7RTS3 328 aa26.47■■□□□ 1.83
TOP3A-213ENST00000582230 NHSQ6T4R5 1651 aa26.47■■□□□ 1.83
TOP3A-213ENST00000582230 BAG6P46379 1132 aa26.46■■□□□ 1.83
TOP3A-213ENST00000582230 CABP4P57796 275 aa26.46■■□□□ 1.83
TOP3A-213ENST00000582230 FAM9BQ8IZU0 186 aa26.46■■□□□ 1.83
TOP3A-213ENST00000582230 LGR6Q9HBX8 967 aa26.46■■□□□ 1.83
TOP3A-213ENST00000582230 TMOD3Q9NYL9 352 aa26.46■■□□□ 1.83
TOP3A-213ENST00000582230 SBF2Q86WG5 1849 aa26.46■■□□□ 1.83
TOP3A-213ENST00000582230 EP400Q96L91 3159 aa26.45■■□□□ 1.83
TOP3A-213ENST00000582230 TMPOP42166 694 aaKnown RBP26.45■■□□□ 1.82
TOP3A-213ENST00000582230 DOT1LQ8TEK3 1739 aa26.44■■□□□ 1.82
TOP3A-213ENST00000582230 PLSCR1O15162 318 aa26.43■■□□□ 1.82
TOP3A-213ENST00000582230 RIPK4P57078 832 aa26.43■■□□□ 1.82
TOP3A-213ENST00000582230 IL17REQ8NFR9 667 aa26.43■■□□□ 1.82
TOP3A-213ENST00000582230 PIGBQ92521 554 aa26.43■■□□□ 1.82
TOP3A-213ENST00000582230 LMOD3Q0VAK6 560 aa26.42■■□□□ 1.82
TOP3A-213ENST00000582230 NFATC2IPQ8NCF5 419 aa26.41■■□□□ 1.82
TOP3A-213ENST00000582230 SLC52A2Q9HAB3 445 aa26.41■■□□□ 1.82
TOP3A-213ENST00000582230 TOGARAM1Q9Y4F4 1720 aa26.41■■□□□ 1.82
TOP3A-213ENST00000582230 CEMIPQ8WUJ3 1361 aa26.41■■□□□ 1.82
TOP3A-213ENST00000582230 TNS1Q9HBL0 1735 aaKnown RBP26.4■■□□□ 1.82
TOP3A-213ENST00000582230 APAF1O14727 1248 aa26.4■■□□□ 1.82
TOP3A-213ENST00000582230 ADAMTS7Q9UKP4 1686 aa26.39■■□□□ 1.82
TOP3A-213ENST00000582230 TEFQ10587 303 aa26.39■■□□□ 1.82
TOP3A-213ENST00000582230 EN1Q05925 392 aaPredicted RBP26.38■■□□□ 1.81
TOP3A-213ENST00000582230 NEUROD2Q15784 382 aa26.38■■□□□ 1.81
TOP3A-213ENST00000582230 MCM10Q7L590 875 aa26.38■■□□□ 1.81
TOP3A-213ENST00000582230 DEFB132Q7Z7B7 95 aa26.38■■□□□ 1.81
TOP3A-213ENST00000582230 SMARCC1Q92922 1105 aaPredicted RBP26.38■■□□□ 1.81
TOP3A-213ENST00000582230 RRP7AQ9Y3A4 280 aaKnown RBP26.38■■□□□ 1.81
TOP3A-213ENST00000582230 CAMKK2Q96RR4 588 aa26.37■■□□□ 1.81
TOP3A-213ENST00000582230 SCN11AQ9UI33 1791 aa26.37■■□□□ 1.81
TOP3A-213ENST00000582230 MRC1P22897 1456 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms