RNA–Protein interactions for RNA: ENST00000581898.5

CUEDC1-210, Transcript of CUE domain containing 1, humanhuman

TSL 5

Gene CUEDC1, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-210ENST00000581898 PAPPAQ13219 1627 aa14.1□□□□□ -0.15
CUEDC1-210ENST00000581898 BTAF1O14981 1849 aa14.1□□□□□ -0.15
CUEDC1-210ENST00000581898 NLGN2Q8NFZ4 835 aa14.09□□□□□ -0.15
CUEDC1-210ENST00000581898 MON2Q7Z3U7 1717 aa14.09□□□□□ -0.15
CUEDC1-210ENST00000581898 GOLGB1Q14789 3259 aaKnown RBP14.08□□□□□ -0.16
CUEDC1-210ENST00000581898 HOXC9P31274 260 aa14.08□□□□□ -0.16
CUEDC1-210ENST00000581898 MAP3K19Q56UN5 1328 aa14.08□□□□□ -0.16
CUEDC1-210ENST00000581898 A0A1W2PP64 1363 aa14.08□□□□□ -0.16
CUEDC1-210ENST00000581898 COL23A1Q86Y22 540 aaPredicted RBP14.07□□□□□ -0.16
CUEDC1-210ENST00000581898 CGNL1Q0VF96 1302 aa14.07□□□□□ -0.16
CUEDC1-210ENST00000581898 USP47Q96K76 1375 aa14.07□□□□□ -0.16
CUEDC1-210ENST00000581898 FLAD1Q8NFF5 587 aa14.06□□□□□ -0.16
CUEDC1-210ENST00000581898 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
CUEDC1-210ENST00000581898 LTN1O94822 1766 aa14.06□□□□□ -0.16
CUEDC1-210ENST00000581898 YBX3P16989 372 aaKnown RBP eCLIP14.05□□□□□ -0.16
CUEDC1-210ENST00000581898 FBLN1P23142 703 aa14.05□□□□□ -0.16
CUEDC1-210ENST00000581898 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
CUEDC1-210ENST00000581898 NBPF6Q5VWK0 638 aa14.04□□□□□ -0.16
CUEDC1-210ENST00000581898 NBPF4Q96M43 638 aa14.04□□□□□ -0.16
CUEDC1-210ENST00000581898 CD2APQ9Y5K6 639 aa14.04□□□□□ -0.16
CUEDC1-210ENST00000581898 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
CUEDC1-210ENST00000581898 NSD2O96028 1365 aa14.03□□□□□ -0.16
CUEDC1-210ENST00000581898 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.17
CUEDC1-210ENST00000581898 IFFO2Q5TF58 517 aa14.02□□□□□ -0.17
CUEDC1-210ENST00000581898 MSL1Q68DK7 614 aa14.02□□□□□ -0.17
CUEDC1-210ENST00000581898 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
CUEDC1-210ENST00000581898 TESK2Q96S53 571 aa14.01□□□□□ -0.17
CUEDC1-210ENST00000581898 QSER1Q2KHR3 1735 aa14.01□□□□□ -0.17
CUEDC1-210ENST00000581898 TONSLQ96HA7 1378 aa14□□□□□ -0.17
CUEDC1-210ENST00000581898 FYB1O15117 783 aa14□□□□□ -0.17
CUEDC1-210ENST00000581898 MPRIPQ6WCQ1 1025 aa14□□□□□ -0.17
CUEDC1-210ENST00000581898 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
CUEDC1-210ENST00000581898 GPBP1L1Q9HC44 474 aaPredicted RBP14□□□□□ -0.17
CUEDC1-210ENST00000581898 CEP350Q5VT06 3117 aa13.99□□□□□ -0.17
CUEDC1-210ENST00000581898 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
CUEDC1-210ENST00000581898 COL24A1Q17RW2 1714 aa13.99□□□□□ -0.17
CUEDC1-210ENST00000581898 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
CUEDC1-210ENST00000581898 SMARCC1Q92922 1105 aaPredicted RBP13.99□□□□□ -0.17
CUEDC1-210ENST00000581898 MEGF6O75095 1541 aa13.99□□□□□ -0.17
CUEDC1-210ENST00000581898 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
CUEDC1-210ENST00000581898 PCDH11XQ9BZA7 1347 aa13.98□□□□□ -0.17
CUEDC1-210ENST00000581898 PCDH11YQ9BZA8 1340 aa13.98□□□□□ -0.17
CUEDC1-210ENST00000581898 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
CUEDC1-210ENST00000581898 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
CUEDC1-210ENST00000581898 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
CUEDC1-210ENST00000581898 AK7Q96M32 723 aa13.97□□□□□ -0.17
CUEDC1-210ENST00000581898 PALLDQ8WX93 1383 aa13.96□□□□□ -0.17
CUEDC1-210ENST00000581898 LY75O60449 1722 aa13.96□□□□□ -0.17
CUEDC1-210ENST00000581898 TMF1P82094 1093 aa13.96□□□□□ -0.17
CUEDC1-210ENST00000581898 ATP10DQ9P241 1426 aa13.96□□□□□ -0.18
CUEDC1-210ENST00000581898 INSRP06213 1382 aa13.96□□□□□ -0.18
CUEDC1-210ENST00000581898 CYP27B1O15528 508 aa13.95□□□□□ -0.18
CUEDC1-210ENST00000581898 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
CUEDC1-210ENST00000581898 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
CUEDC1-210ENST00000581898 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
CUEDC1-210ENST00000581898 PHF14O94880 888 aa13.93□□□□□ -0.18
CUEDC1-210ENST00000581898 HSPA6P17066 643 aa13.93□□□□□ -0.18
CUEDC1-210ENST00000581898 CDCA8Q53HL2 280 aa13.93□□□□□ -0.18
CUEDC1-210ENST00000581898 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
CUEDC1-210ENST00000581898 PIGBQ92521 554 aa13.93□□□□□ -0.18
CUEDC1-210ENST00000581898 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
CUEDC1-210ENST00000581898 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
CUEDC1-210ENST00000581898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
CUEDC1-210ENST00000581898 SSFA2P28290 1259 aa13.92□□□□□ -0.18
CUEDC1-210ENST00000581898 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
CUEDC1-210ENST00000581898 FLT4P35916 1363 aa13.92□□□□□ -0.18
CUEDC1-210ENST00000581898 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
CUEDC1-210ENST00000581898 NSD3Q9BZ95 1437 aa13.91□□□□□ -0.18
CUEDC1-210ENST00000581898 LOC102724428A0A0B4J2F2 783 aa13.9□□□□□ -0.18
CUEDC1-210ENST00000581898 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
CUEDC1-210ENST00000581898 SIK1P57059 783 aa13.9□□□□□ -0.18
CUEDC1-210ENST00000581898 RGPD2P0DJD1 1756 aa13.9□□□□□ -0.18
CUEDC1-210ENST00000581898 ADCY9O60503 1353 aa13.89□□□□□ -0.19
CUEDC1-210ENST00000581898 SMIM5Q71RC9 77 aa13.89□□□□□ -0.19
CUEDC1-210ENST00000581898 AMIGO3Q86WK7 504 aa13.89□□□□□ -0.19
CUEDC1-210ENST00000581898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.19
CUEDC1-210ENST00000581898 TMOD3Q9NYL9 352 aa13.89□□□□□ -0.19
CUEDC1-210ENST00000581898 WWC3Q9ULE0 1092 aa13.89□□□□□ -0.19
CUEDC1-210ENST00000581898 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
CUEDC1-210ENST00000581898 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
CUEDC1-210ENST00000581898 C5P01031 1676 aa13.88□□□□□ -0.19
CUEDC1-210ENST00000581898 GNPATO15228 680 aa13.87□□□□□ -0.19
CUEDC1-210ENST00000581898 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
CUEDC1-210ENST00000581898 LINC00116Q8NCU8 138 aa13.87□□□□□ -0.19
CUEDC1-210ENST00000581898 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
CUEDC1-210ENST00000581898 TGFB2P61812 414 aa13.86□□□□□ -0.19
CUEDC1-210ENST00000581898 TRAPPC3LQ5T215 181 aa13.86□□□□□ -0.19
CUEDC1-210ENST00000581898 NLGN1Q8N2Q7 840 aa13.86□□□□□ -0.19
CUEDC1-210ENST00000581898 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
CUEDC1-210ENST00000581898 WASHC2AQ641Q2 1341 aa13.86□□□□□ -0.19
CUEDC1-210ENST00000581898 MMP10P09238 476 aa13.85□□□□□ -0.19
CUEDC1-210ENST00000581898 EYA1Q99502 592 aa13.85□□□□□ -0.19
CUEDC1-210ENST00000581898 C4BP0C0L5 1744 aa13.84□□□□□ -0.19
CUEDC1-210ENST00000581898 KIF3CO14782 793 aa13.84□□□□□ -0.19
CUEDC1-210ENST00000581898 PHKG2P15735 406 aa13.84□□□□□ -0.19
CUEDC1-210ENST00000581898 ITPK1Q13572 414 aa13.84□□□□□ -0.19
CUEDC1-210ENST00000581898 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
CUEDC1-210ENST00000581898 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
CUEDC1-210ENST00000581898 APLP1P51693 650 aa13.83□□□□□ -0.2
CUEDC1-210ENST00000581898 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms