RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 RAPGEF4Q8WZA2 1011 aa30.86■■■□□ 2.53
CASC3-207ENST00000581849 SPON1Q9HCB6 807 aa30.86■■■□□ 2.53
CASC3-207ENST00000581849 STK32BQ9NY57 414 aa30.85■■■□□ 2.53
CASC3-207ENST00000581849 POLR3GLQ9BT43 218 aa30.84■■■□□ 2.53
CASC3-207ENST00000581849 EMILIN1Q9Y6C2 1016 aa30.84■■■□□ 2.53
CASC3-207ENST00000581849 PAPPAQ13219 1627 aa30.84■■■□□ 2.53
CASC3-207ENST00000581849 NCAPD2Q15021 1401 aa30.82■■■□□ 2.52
CASC3-207ENST00000581849 MAP2P11137 1827 aaKnown RBP30.82■■■□□ 2.52
CASC3-207ENST00000581849 DOT1LQ8TEK3 1739 aa30.82■■■□□ 2.52
CASC3-207ENST00000581849 WASHC2AQ641Q2 1341 aa30.82■■■□□ 2.52
CASC3-207ENST00000581849 SLC15A2Q16348 729 aa30.82■■■□□ 2.52
CASC3-207ENST00000581849 TATP17735 454 aaPredicted RBP30.81■■■□□ 2.52
CASC3-207ENST00000581849 USHBP1Q8N6Y0 703 aa30.8■■■□□ 2.52
CASC3-207ENST00000581849 NSD2O96028 1365 aa30.79■■■□□ 2.52
CASC3-207ENST00000581849 SLC27A3Q5K4L6 730 aa30.77■■■□□ 2.52
CASC3-207ENST00000581849 PANK3Q9H999 370 aa30.77■■■□□ 2.52
CASC3-207ENST00000581849 PCDH11XQ9BZA7 1347 aa30.76■■■□□ 2.52
CASC3-207ENST00000581849 PCDH11YQ9BZA8 1340 aa30.76■■■□□ 2.52
CASC3-207ENST00000581849 PRIM1P49642 420 aaKnown RBP30.75■■■□□ 2.51
CASC3-207ENST00000581849 POLKQ9UBT6 870 aa30.75■■■□□ 2.51
CASC3-207ENST00000581849 PKD1L3Q7Z443 1732 aa30.74■■■□□ 2.51
CASC3-207ENST00000581849 PPM1GO15355 546 aaPredicted RBP30.74■■■□□ 2.51
CASC3-207ENST00000581849 LY75O60449 1722 aa30.73■■■□□ 2.51
CASC3-207ENST00000581849 SYTL4Q96C24 671 aaPredicted RBP30.73■■■□□ 2.51
CASC3-207ENST00000581849 PPP1R1BQ9UD71 204 aaPredicted RBP30.72■■■□□ 2.51
CASC3-207ENST00000581849 PLEKHG2Q9H7P9 1386 aa30.71■■■□□ 2.51
CASC3-207ENST00000581849 LRRC4BQ9NT99 713 aa30.71■■■□□ 2.51
CASC3-207ENST00000581849 PDGFDQ9GZP0 370 aaPredicted RBP30.7■■■□□ 2.51
CASC3-207ENST00000581849 QSER1Q2KHR3 1735 aa30.69■■■□□ 2.5
CASC3-207ENST00000581849 EYA1Q99502 592 aa30.67■■■□□ 2.5
CASC3-207ENST00000581849 MTFR1LQ9H019 292 aa30.67■■■□□ 2.5
CASC3-207ENST00000581849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.67■■■□□ 2.57e-8■■■□□ 14.6
CASC3-207ENST00000581849 CYP27B1O15528 508 aa30.65■■■□□ 2.5
CASC3-207ENST00000581849 ZBTB7AO95365 584 aa30.65■■■□□ 2.5
CASC3-207ENST00000581849 ZNF827Q17R98 1081 aa30.65■■■□□ 2.5
CASC3-207ENST00000581849 AKT1S1Q96B36 256 aa30.65■■■□□ 2.5
CASC3-207ENST00000581849 SPG7Q9UQ90 795 aa30.64■■■□□ 2.5
CASC3-207ENST00000581849 HMGB2P26583 209 aaKnown RBP30.63■■■□□ 2.49
CASC3-207ENST00000581849 PTGER2P43116 358 aa30.63■■■□□ 2.49
CASC3-207ENST00000581849 TNNT2P45379 298 aaPredicted RBP30.63■■■□□ 2.49
CASC3-207ENST00000581849 EIF4A2Q14240 407 aaKnown RBP30.62■■■□□ 2.49
CASC3-207ENST00000581849 NKX1-1Q15270 411 aaPredicted RBP30.62■■■□□ 2.49
CASC3-207ENST00000581849 KNSTRNQ9Y448 316 aa30.62■■■□□ 2.49
CASC3-207ENST00000581849 KIF7Q2M1P5 1343 aa30.61■■■□□ 2.49
CASC3-207ENST00000581849 TOGARAM1Q9Y4F4 1720 aa30.59■■■□□ 2.49
CASC3-207ENST00000581849 MORC1Q86VD1 984 aa30.59■■■□□ 2.49
CASC3-207ENST00000581849 SLC16A10Q8TF71 515 aa30.59■■■□□ 2.49
CASC3-207ENST00000581849 CCNL1Q9UK58 526 aaPredicted RBP30.59■■■□□ 2.49
CASC3-207ENST00000581849 ATF5Q9Y2D1 282 aaPredicted RBP30.59■■■□□ 2.49
CASC3-207ENST00000581849 IGSF1Q8N6C5 1336 aa30.58■■■□□ 2.49
CASC3-207ENST00000581849 SGIP1Q9BQI5 828 aa30.58■■■□□ 2.49
CASC3-207ENST00000581849 ITGB4P16144 1822 aa30.58■■■□□ 2.49
CASC3-207ENST00000581849 TUBGCP6Q96RT7 1819 aa30.54■■■□□ 2.48
CASC3-207ENST00000581849 SMARCC1Q92922 1105 aaPredicted RBP30.54■■■□□ 2.48
CASC3-207ENST00000581849 COL24A1Q17RW2 1714 aa30.53■■■□□ 2.48
CASC3-207ENST00000581849 PNPLA7Q6ZV29 1317 aa30.53■■■□□ 2.48
CASC3-207ENST00000581849 AMER1Q5JTC6 1135 aaPredicted RBP30.53■■■□□ 2.48
CASC3-207ENST00000581849 MPRIPQ6WCQ1 1025 aa30.53■■■□□ 2.48
CASC3-207ENST00000581849 IFNL2Q8IZJ0 200 aa30.53■■■□□ 2.48
CASC3-207ENST00000581849 TFCP2L1Q9NZI6 479 aa30.53■■■□□ 2.48
CASC3-207ENST00000581849 PALLDQ8WX93 1383 aa30.53■■■□□ 2.48
CASC3-207ENST00000581849 KCNQ4P56696 695 aa30.51■■■□□ 2.47
CASC3-207ENST00000581849 C5P01031 1676 aa30.51■■■□□ 2.47
CASC3-207ENST00000581849 DCAF8L1A6NGE4 600 aa30.5■■■□□ 2.47
CASC3-207ENST00000581849 PHKG2P15735 406 aa30.5■■■□□ 2.47
CASC3-207ENST00000581849 TAF1LQ8IZX4 1826 aa30.48■■■□□ 2.47
CASC3-207ENST00000581849 MAP3K5Q99683 1374 aa30.48■■■□□ 2.47
CASC3-207ENST00000581849 PIGBQ92521 554 aa30.47■■■□□ 2.47
CASC3-207ENST00000581849 ARXQ96QS3 562 aa30.47■■■□□ 2.47
CASC3-207ENST00000581849 PER1O15534 1290 aaPredicted RBP30.45■■■□□ 2.47
CASC3-207ENST00000581849 FHDC1Q9C0D6 1143 aaPredicted RBP30.45■■■□□ 2.47
CASC3-207ENST00000581849 AMOTQ4VCS5 1084 aa30.44■■■□□ 2.46
CASC3-207ENST00000581849 SYT17Q9BSW7 474 aa30.44■■■□□ 2.46
CASC3-207ENST00000581849 TMOD3Q9NYL9 352 aa30.44■■■□□ 2.46
CASC3-207ENST00000581849 HSP90AB1P08238 724 aaKnown RBP30.43■■■□□ 2.46
CASC3-207ENST00000581849 PLEKHO1Q53GL0 409 aaPredicted RBP30.43■■■□□ 2.46
CASC3-207ENST00000581849 KDRP35968 1356 aa30.42■■■□□ 2.46
CASC3-207ENST00000581849 POLD1P28340 1107 aa30.42■■■□□ 2.46
CASC3-207ENST00000581849 NPC1L1Q9UHC9 1359 aa30.41■■■□□ 2.46
CASC3-207ENST00000581849 FLAD1Q8NFF5 587 aa30.41■■■□□ 2.46
CASC3-207ENST00000581849 C4BP0C0L5 1744 aa30.4■■■□□ 2.46
CASC3-207ENST00000581849 IL13P35225 146 aa30.4■■■□□ 2.46
CASC3-207ENST00000581849 ERVV-2B6SEH9 535 aa30.39■■■□□ 2.46
CASC3-207ENST00000581849 DCAF5Q96JK2 942 aa30.39■■■□□ 2.46
CASC3-207ENST00000581849 LOC102724428A0A0B4J2F2 783 aa30.37■■■□□ 2.45
CASC3-207ENST00000581849 SIK1P57059 783 aa30.37■■■□□ 2.45
CASC3-207ENST00000581849 COL23A1Q86Y22 540 aaPredicted RBP30.37■■■□□ 2.45
CASC3-207ENST00000581849 MTHFSP49914 203 aa30.35■■■□□ 2.45
CASC3-207ENST00000581849 SULT6B1Q6IMI4 303 aa30.35■■■□□ 2.45
CASC3-207ENST00000581849 ZNF530Q6P9A1 599 aaPredicted RBP30.35■■■□□ 2.45
CASC3-207ENST00000581849 AEBP1Q8IUX7 1158 aa30.35■■■□□ 2.45
CASC3-207ENST00000581849 ZNF831Q5JPB2 1677 aa30.33■■■□□ 2.45
CASC3-207ENST00000581849 AK7Q96M32 723 aa30.33■■■□□ 2.45
CASC3-207ENST00000581849 ASAP1Q9ULH1 1129 aa30.33■■■□□ 2.45
CASC3-207ENST00000581849 UBR3Q6ZT12 1888 aa30.33■■■□□ 2.45
CASC3-207ENST00000581849 KDM6AO15550 1401 aaPredicted RBP30.32■■■□□ 2.44
CASC3-207ENST00000581849 ATG3Q9NT62 314 aa30.32■■■□□ 2.44
CASC3-207ENST00000581849 MSH5O43196 834 aa30.31■■■□□ 2.44
CASC3-207ENST00000581849 C1orf141Q5JVX7 400 aa30.3■■■□□ 2.44
CASC3-207ENST00000581849 CC2D1BQ5T0F9 858 aaKnown RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms