RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 MYOM1P52179 1685 aa13.51□□□□□ -0.25
TOP3A-211ENST00000581536 NINLQ9Y2I6 1382 aa13.51□□□□□ -0.25
TOP3A-211ENST00000581536 EIF4G2P78344 907 aaKnown RBP eCLIP13.51□□□□□ -0.25
TOP3A-211ENST00000581536 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-211ENST00000581536 CDCA8Q53HL2 280 aa13.51□□□□□ -0.25
TOP3A-211ENST00000581536 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-211ENST00000581536 COG3Q96JB2 828 aa13.51□□□□□ -0.25
TOP3A-211ENST00000581536 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
TOP3A-211ENST00000581536 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
TOP3A-211ENST00000581536 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
TOP3A-211ENST00000581536 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
TOP3A-211ENST00000581536 PYGBP11216 843 aa13.5□□□□□ -0.25
TOP3A-211ENST00000581536 FAM196AQ6ZSG2 479 aa13.5□□□□□ -0.25
TOP3A-211ENST00000581536 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
TOP3A-211ENST00000581536 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-211ENST00000581536 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
TOP3A-211ENST00000581536 SBF2Q86WG5 1849 aa13.49□□□□□ -0.25
TOP3A-211ENST00000581536 WNK3Q9BYP7 1800 aa13.49□□□□□ -0.25
TOP3A-211ENST00000581536 ANKRD24Q8TF21 1146 aa13.49□□□□□ -0.25
TOP3A-211ENST00000581536 IP6K1Q92551 441 aa13.49□□□□□ -0.25
TOP3A-211ENST00000581536 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
TOP3A-211ENST00000581536 RGPD1P0DJD0 1748 aa13.48□□□□□ -0.25
TOP3A-211ENST00000581536 TNS1Q9HBL0 1735 aaKnown RBP13.48□□□□□ -0.25
TOP3A-211ENST00000581536 RRS1Q15050 365 aaKnown RBP13.48□□□□□ -0.25
TOP3A-211ENST00000581536 DDB1Q16531 1140 aa13.48□□□□□ -0.25
TOP3A-211ENST00000581536 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
TOP3A-211ENST00000581536 NLRP2Q9NX02 1062 aa13.48□□□□□ -0.25
TOP3A-211ENST00000581536 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
TOP3A-211ENST00000581536 EZH2Q15910 746 aaKnown RBP13.47□□□□□ -0.25
TOP3A-211ENST00000581536 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
TOP3A-211ENST00000581536 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-211ENST00000581536 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
TOP3A-211ENST00000581536 ERBB3P21860 1342 aa13.46□□□□□ -0.25
TOP3A-211ENST00000581536 APBA3O96018 575 aa13.46□□□□□ -0.25
TOP3A-211ENST00000581536 HOXC9P31274 260 aa13.46□□□□□ -0.25
TOP3A-211ENST00000581536 BAG6P46379 1132 aa13.46□□□□□ -0.25
TOP3A-211ENST00000581536 AMPHP49418 695 aa13.46□□□□□ -0.25
TOP3A-211ENST00000581536 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
TOP3A-211ENST00000581536 SRCAPQ6ZRS2 3230 aa13.45□□□□□ -0.26
TOP3A-211ENST00000581536 EXOC5O00471 708 aa13.45□□□□□ -0.26
TOP3A-211ENST00000581536 MAP3K13O43283 966 aa13.45□□□□□ -0.26
TOP3A-211ENST00000581536 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-211ENST00000581536 NSD3Q9BZ95 1437 aa13.45□□□□□ -0.26
TOP3A-211ENST00000581536 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
TOP3A-211ENST00000581536 CAMKK2Q96RR4 588 aa13.44□□□□□ -0.26
TOP3A-211ENST00000581536 PANK3Q9H999 370 aa13.44□□□□□ -0.26
TOP3A-211ENST00000581536 DISP2A7MBM2 1401 aa13.43□□□□□ -0.26
TOP3A-211ENST00000581536 GABBR2O75899 941 aa13.43□□□□□ -0.26
TOP3A-211ENST00000581536 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-211ENST00000581536 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
TOP3A-211ENST00000581536 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-211ENST00000581536 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
TOP3A-211ENST00000581536 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
TOP3A-211ENST00000581536 ABCC6O95255 1503 aa13.42□□□□□ -0.26
TOP3A-211ENST00000581536 CCDC7Q96M83 1385 aa13.42□□□□□ -0.26
TOP3A-211ENST00000581536 IL2RBP14784 551 aa13.41□□□□□ -0.26
TOP3A-211ENST00000581536 NBPF6Q5VWK0 638 aa13.41□□□□□ -0.26
TOP3A-211ENST00000581536 NBPF4Q96M43 638 aa13.41□□□□□ -0.26
TOP3A-211ENST00000581536 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
TOP3A-211ENST00000581536 KCNQ2O43526 872 aa13.4□□□□□ -0.26
TOP3A-211ENST00000581536 USHBP1Q8N6Y0 703 aa13.4□□□□□ -0.26
TOP3A-211ENST00000581536 PPM1GO15355 546 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-211ENST00000581536 TNNT2P45379 298 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-211ENST00000581536 ACSBG1Q96GR2 724 aa13.39□□□□□ -0.27
TOP3A-211ENST00000581536 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
TOP3A-211ENST00000581536 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-211ENST00000581536 DDX54Q8TDD1 881 aaKnown RBP13.38□□□□□ -0.27
TOP3A-211ENST00000581536 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
TOP3A-211ENST00000581536 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
TOP3A-211ENST00000581536 MS4A3Q96HJ5 214 aa13.37□□□□□ -0.27
TOP3A-211ENST00000581536 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
TOP3A-211ENST00000581536 CGNL1Q0VF96 1302 aa13.37□□□□□ -0.27
TOP3A-211ENST00000581536 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
TOP3A-211ENST00000581536 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
TOP3A-211ENST00000581536 ANKRD26Q9UPS8 1709 aa13.36□□□□□ -0.27
TOP3A-211ENST00000581536 RREB1Q92766 1687 aa13.35□□□□□ -0.27
TOP3A-211ENST00000581536 GALR2O43603 387 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-211ENST00000581536 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
TOP3A-211ENST00000581536 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
TOP3A-211ENST00000581536 INSRP06213 1382 aa13.34□□□□□ -0.27
TOP3A-211ENST00000581536 SHANK3Q9BYB0 1731 aa13.34□□□□□ -0.27
TOP3A-211ENST00000581536 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
TOP3A-211ENST00000581536 PLSCR1O15162 318 aa13.34□□□□□ -0.27
TOP3A-211ENST00000581536 RTL1A6NKG5 1358 aa13.33□□□□□ -0.27
TOP3A-211ENST00000581536 BCL9O00512 1426 aa13.33□□□□□ -0.28
TOP3A-211ENST00000581536 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
TOP3A-211ENST00000581536 WASHC2AQ641Q2 1341 aa13.33□□□□□ -0.28
TOP3A-211ENST00000581536 MEGF6O75095 1541 aa13.33□□□□□ -0.28
TOP3A-211ENST00000581536 FLT4P35916 1363 aa13.32□□□□□ -0.28
TOP3A-211ENST00000581536 BTAF1O14981 1849 aa13.32□□□□□ -0.28
TOP3A-211ENST00000581536 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
TOP3A-211ENST00000581536 PER1O15534 1290 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-211ENST00000581536 EYA1Q99502 592 aa13.31□□□□□ -0.28
TOP3A-211ENST00000581536 PCDHB8Q9UN66 801 aa13.31□□□□□ -0.28
TOP3A-211ENST00000581536 KNSTRNQ9Y448 316 aa13.31□□□□□ -0.28
TOP3A-211ENST00000581536 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-211ENST00000581536 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
TOP3A-211ENST00000581536 MORC1Q86VD1 984 aa13.3□□□□□ -0.28
TOP3A-211ENST00000581536 RNF25Q96BH1 459 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-211ENST00000581536 NHSQ6T4R5 1651 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms