RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 PPP6R1Q9UPN7 881 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 XRCC6P12956 609 aaKnown RBP eCLIP5.19□□□□□ -1.58
RTTN-206ENST00000581161 TCP11L2Q8N4U5 519 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 DIAPH3Q9NSV4 1193 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 PARP4Q9UKK3 1724 aaKnown RBP5.19□□□□□ -1.58
RTTN-206ENST00000581161 CBX1P83916 185 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 ZKSCAN2Q63HK3 967 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 PAPPAQ13219 1627 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 CCDC175P0C221 793 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 CCDC27Q2M243 656 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 DDX11L8A8MPP1 907 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 MCM4P33991 863 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 CFAP70Q5T0N1 1121 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 ARID3AQ99856 593 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 USP31Q70CQ4 1352 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 VGFO15240 615 aaPredicted RBP5.18□□□□□ -1.58
RTTN-206ENST00000581161 TEX35Q5T0J7 233 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 SIRT1Q96EB6 747 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 CCDC43Q96MW1 224 aaKnown RBP5.18□□□□□ -1.58
RTTN-206ENST00000581161 DZIP1LQ8IYY4 767 aaKnown RBP5.18□□□□□ -1.58
RTTN-206ENST00000581161 RUNDC1Q96C34 613 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 TSPOAP1O95153 1857 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 SAFB2Q14151 953 aaKnown RBP eCLIP5.18□□□□□ -1.58
RTTN-206ENST00000581161 MAP2P11137 1827 aaKnown RBP5.18□□□□□ -1.58
RTTN-206ENST00000581161 PHF14O94880 888 aa5.18□□□□□ -1.58
RTTN-206ENST00000581161 HMGN5P82970 282 aaKnown RBP5.18□□□□□ -1.58
RTTN-206ENST00000581161 TSR2Q969E8 191 aaKnown RBP5.18□□□□□ -1.58
RTTN-206ENST00000581161 ZNF692Q9BU19 519 aaPredicted RBP5.18□□□□□ -1.58
RTTN-206ENST00000581161 MRE11P49959 708 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 RARSP54136 660 aaKnown RBP5.17□□□□□ -1.58
RTTN-206ENST00000581161 TBC1D32Q96NH3 1257 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 PCDHB15Q9Y5E8 787 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 NINLQ9Y2I6 1382 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 DCTN1Q14203 1278 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 GBP4Q96PP9 640 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 TRAK1Q9UPV9 953 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 RLBP1P12271 317 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 CCDC173Q0VFZ6 552 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 CT47A1Q5JQC4 288 aaPredicted RBP5.17□□□□□ -1.58
RTTN-206ENST00000581161 NUTM2DQ5VT03 806 aaPredicted RBP5.17□□□□□ -1.58
RTTN-206ENST00000581161 ITSN1Q15811 1721 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 PKNOX2Q96KN3 472 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 FEZ1Q99689 392 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 UBR2Q8IWV8 1755 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 KDRP35968 1356 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 CYB5RLQ6IPT4 315 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 GRPEL1Q9HAV7 217 aa5.17□□□□□ -1.58
RTTN-206ENST00000581161 KIF3BO15066 747 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 TPM1P09493 284 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 AMOTL1Q8IY63 956 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 CCDC47Q96A33 483 aaKnown RBP5.16□□□□□ -1.58
RTTN-206ENST00000581161 AATKQ6ZMQ8 1374 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 RPGRIP1LQ68CZ1 1315 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 SLIT3O75094 1523 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 MVPQ14764 893 aaKnown RBP5.16□□□□□ -1.58
RTTN-206ENST00000581161 CCDC9Q9Y3X0 531 aaKnown RBP5.16□□□□□ -1.58
RTTN-206ENST00000581161 RGPD8O14715 1765 aaPredicted RBP5.16□□□□□ -1.58
RTTN-206ENST00000581161 PTCH1Q13635 1447 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 TPD52L1Q16890 204 aaPredicted RBP5.16□□□□□ -1.58
RTTN-206ENST00000581161 ANTXR1Q9H6X2 564 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 ATP10DQ9P241 1426 aa5.16□□□□□ -1.58
RTTN-206ENST00000581161 HMGB3O15347 200 aaKnown RBP5.15□□□□□ -1.58
RTTN-206ENST00000581161 EXOSC9Q06265 439 aaKnown RBP5.15□□□□□ -1.58
RTTN-206ENST00000581161 ZNF853P0CG23 659 aa5.15□□□□□ -1.58
RTTN-206ENST00000581161 NGEFQ8N5V2 710 aa5.15□□□□□ -1.58
RTTN-206ENST00000581161 LNPKQ9C0E8 428 aa5.15□□□□□ -1.58
RTTN-206ENST00000581161 CALD1Q05682 793 aaKnown RBP5.15□□□□□ -1.58
RTTN-206ENST00000581161 CREBRFQ8IUR6 639 aa5.15□□□□□ -1.58
RTTN-206ENST00000581161 NOL10Q9BSC4 688 aaKnown RBP5.15□□□□□ -1.58
RTTN-206ENST00000581161 WDR70Q9NW82 654 aa5.15□□□□□ -1.58
RTTN-206ENST00000581161 MYO6Q9UM54 1294 aa5.15□□□□□ -1.58
RTTN-206ENST00000581161 ANKRD36BQ8N2N9 1353 aa5.15□□□□□ -1.58
RTTN-206ENST00000581161 MTHFSP49914 203 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 ARGLU1Q9NWB6 273 aaPredicted RBP5.15□□□□□ -1.59
RTTN-206ENST00000581161 NSD2O96028 1365 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 HEG1Q9ULI3 1381 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 HOMER1Q86YM7 354 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 CCAR1Q8IX12 1150 aaKnown RBP5.15□□□□□ -1.59
RTTN-206ENST00000581161 CACNA1FO60840 1977 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 EZRP15311 586 aaKnown RBP5.15□□□□□ -1.59
RTTN-206ENST00000581161 MAP7D2Q96T17 732 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 DDX23Q9BUQ8 820 aaKnown RBP5.15□□□□□ -1.59
RTTN-206ENST00000581161 SLC12A5Q9H2X9 1139 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 DDX19BQ9UMR2 479 aa5.15□□□□□ -1.59
RTTN-206ENST00000581161 RREB1Q92766 1687 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 NOP2P46087 812 aaKnown RBP5.14□□□□□ -1.59
RTTN-206ENST00000581161 AAMPQ13685 434 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 FAM69CQ0P6D2 419 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 MRC1P22897 1456 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 NSD3Q9BZ95 1437 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 SPDYE4A6NLX3 237 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 CSPP1Q1MSJ5 1256 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 NOB1Q9ULX3 412 aaKnown RBP5.14□□□□□ -1.59
RTTN-206ENST00000581161 PKD1L3Q7Z443 1732 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 APBB1O00213 710 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 WDHD1O75717 1129 aaPredicted RBP5.14□□□□□ -1.59
RTTN-206ENST00000581161 ANKRD45Q5TZF3 282 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 ESPNB1AK53 854 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 RAPGEF3O95398 923 aa5.14□□□□□ -1.59
RTTN-206ENST00000581161 CLCN1P35523 988 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms