RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
CDC42EP4-207ENST00000581045 PKD1L3Q7Z443 1732 aa17.55■□□□□ 0.4
CDC42EP4-207ENST00000581045 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
CDC42EP4-207ENST00000581045 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
CDC42EP4-207ENST00000581045 UPF1Q92900 1129 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDC42EP4-207ENST00000581045 HMOX1P09601 288 aa17.54■□□□□ 0.4
CDC42EP4-207ENST00000581045 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
CDC42EP4-207ENST00000581045 FAM196AQ6ZSG2 479 aa17.53■□□□□ 0.4
CDC42EP4-207ENST00000581045 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.4
CDC42EP4-207ENST00000581045 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-207ENST00000581045 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.4
CDC42EP4-207ENST00000581045 PRKRIP1Q9H875 184 aaPredicted RBP17.52■□□□□ 0.4
CDC42EP4-207ENST00000581045 TRIM37O94972 964 aa17.51■□□□□ 0.39
CDC42EP4-207ENST00000581045 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
CDC42EP4-207ENST00000581045 SF3B2Q13435 895 aaKnown RBP17.49■□□□□ 0.39
CDC42EP4-207ENST00000581045 SPG7Q9UQ90 795 aa17.49■□□□□ 0.39
CDC42EP4-207ENST00000581045 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
CDC42EP4-207ENST00000581045 PCDH11XQ9BZA7 1347 aa17.48■□□□□ 0.39
CDC42EP4-207ENST00000581045 PCDH11YQ9BZA8 1340 aa17.48■□□□□ 0.39
CDC42EP4-207ENST00000581045 KDRP35968 1356 aa17.48■□□□□ 0.39
CDC42EP4-207ENST00000581045 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
CDC42EP4-207ENST00000581045 ANP32CO43423 234 aa17.47■□□□□ 0.39
CDC42EP4-207ENST00000581045 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
CDC42EP4-207ENST00000581045 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
CDC42EP4-207ENST00000581045 CYP27B1O15528 508 aa17.46■□□□□ 0.39
CDC42EP4-207ENST00000581045 TOGARAM1Q9Y4F4 1720 aa17.46■□□□□ 0.39
CDC42EP4-207ENST00000581045 BTAF1O14981 1849 aa17.45■□□□□ 0.38
CDC42EP4-207ENST00000581045 VIRMAQ69YN4 1812 aaKnown RBP17.45■□□□□ 0.38
CDC42EP4-207ENST00000581045 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-207ENST00000581045 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
CDC42EP4-207ENST00000581045 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
CDC42EP4-207ENST00000581045 ITGB4P16144 1822 aa17.44■□□□□ 0.38
CDC42EP4-207ENST00000581045 KCNQ2O43526 872 aa17.44■□□□□ 0.38
CDC42EP4-207ENST00000581045 ZNF530Q6P9A1 599 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-207ENST00000581045 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
CDC42EP4-207ENST00000581045 APBA3O96018 575 aa17.43■□□□□ 0.38
CDC42EP4-207ENST00000581045 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
CDC42EP4-207ENST00000581045 BCL9O00512 1426 aa17.42■□□□□ 0.38
CDC42EP4-207ENST00000581045 PHKG2P15735 406 aa17.42■□□□□ 0.38
CDC42EP4-207ENST00000581045 PRKAR2BP31323 418 aa17.42■□□□□ 0.38
CDC42EP4-207ENST00000581045 AMOTQ4VCS5 1084 aa17.42■□□□□ 0.38
CDC42EP4-207ENST00000581045 IFNL2Q8IZJ0 200 aa17.42■□□□□ 0.38
CDC42EP4-207ENST00000581045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.38
CDC42EP4-207ENST00000581045 BAG6P46379 1132 aa17.41■□□□□ 0.38
CDC42EP4-207ENST00000581045 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-207ENST00000581045 C1orf141Q5JVX7 400 aa17.41■□□□□ 0.38
CDC42EP4-207ENST00000581045 RSPH6AQ9H0K4 717 aa17.41■□□□□ 0.38
CDC42EP4-207ENST00000581045 PRIM1P49642 420 aaKnown RBP17.4■□□□□ 0.38
CDC42EP4-207ENST00000581045 BCL11BQ9C0K0 894 aaPredicted RBP17.4■□□□□ 0.38
CDC42EP4-207ENST00000581045 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
CDC42EP4-207ENST00000581045 PLEKHG2Q9H7P9 1386 aa17.39■□□□□ 0.37
CDC42EP4-207ENST00000581045 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
CDC42EP4-207ENST00000581045 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDC42EP4-207ENST00000581045 CCDC184Q52MB2 194 aa17.38■□□□□ 0.37
CDC42EP4-207ENST00000581045 FCHSD2O94868 740 aa17.37■□□□□ 0.37
CDC42EP4-207ENST00000581045 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
CDC42EP4-207ENST00000581045 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
CDC42EP4-207ENST00000581045 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
CDC42EP4-207ENST00000581045 DLG5Q8TDM6 1919 aa17.37■□□□□ 0.37
CDC42EP4-207ENST00000581045 KDM6AO15550 1401 aaPredicted RBP17.36■□□□□ 0.37
CDC42EP4-207ENST00000581045 RREB1Q92766 1687 aa17.36■□□□□ 0.37
CDC42EP4-207ENST00000581045 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
CDC42EP4-207ENST00000581045 NKX1-1Q15270 411 aaPredicted RBP17.35■□□□□ 0.37
CDC42EP4-207ENST00000581045 AKAP4Q5JQC9 854 aa17.35■□□□□ 0.37
CDC42EP4-207ENST00000581045 RGPD3A6NKT7 1758 aaPredicted RBP17.35■□□□□ 0.37
CDC42EP4-207ENST00000581045 RGPD4Q7Z3J3 1758 aa17.35■□□□□ 0.37
CDC42EP4-207ENST00000581045 NEFMP07197 916 aa17.34■□□□□ 0.37
CDC42EP4-207ENST00000581045 NUP188Q5SRE5 1749 aa17.34■□□□□ 0.37
CDC42EP4-207ENST00000581045 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
CDC42EP4-207ENST00000581045 GAS2L2Q8NHY3 880 aa17.34■□□□□ 0.37
CDC42EP4-207ENST00000581045 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
CDC42EP4-207ENST00000581045 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.36
CDC42EP4-207ENST00000581045 DCAF5Q96JK2 942 aa17.33■□□□□ 0.36
CDC42EP4-207ENST00000581045 TMOD3Q9NYL9 352 aa17.33■□□□□ 0.36
CDC42EP4-207ENST00000581045 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
CDC42EP4-207ENST00000581045 CAMKK2Q96RR4 588 aa17.32■□□□□ 0.36
CDC42EP4-207ENST00000581045 LY75O60449 1722 aa17.31■□□□□ 0.36
CDC42EP4-207ENST00000581045 CABP4P57796 275 aa17.31■□□□□ 0.36
CDC42EP4-207ENST00000581045 PNNQ9H307 717 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-207ENST00000581045 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
CDC42EP4-207ENST00000581045 ADAMTS8Q9UP79 889 aa17.31■□□□□ 0.36
CDC42EP4-207ENST00000581045 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
CDC42EP4-207ENST00000581045 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
CDC42EP4-207ENST00000581045 PIGBQ92521 554 aa17.3■□□□□ 0.36
CDC42EP4-207ENST00000581045 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
CDC42EP4-207ENST00000581045 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
CDC42EP4-207ENST00000581045 PLSCR1O15162 318 aa17.29■□□□□ 0.36
CDC42EP4-207ENST00000581045 RNMTO43148 476 aaKnown RBP17.29■□□□□ 0.36
CDC42EP4-207ENST00000581045 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
CDC42EP4-207ENST00000581045 TXNRD1Q16881 649 aa17.28■□□□□ 0.36
CDC42EP4-207ENST00000581045 KCNQ4P56696 695 aa17.27■□□□□ 0.36
CDC42EP4-207ENST00000581045 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
CDC42EP4-207ENST00000581045 RTF1Q92541 710 aaKnown RBP17.27■□□□□ 0.36
CDC42EP4-207ENST00000581045 ASAP1Q9ULH1 1129 aa17.27■□□□□ 0.36
CDC42EP4-207ENST00000581045 SIPA1L3O60292 1781 aaPredicted RBP17.27■□□□□ 0.35
CDC42EP4-207ENST00000581045 PALLDQ8WX93 1383 aa17.27■□□□□ 0.35
CDC42EP4-207ENST00000581045 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
CDC42EP4-207ENST00000581045 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
CDC42EP4-207ENST00000581045 MCM10Q7L590 875 aa17.26■□□□□ 0.35
CDC42EP4-207ENST00000581045 PROM2Q8N271 834 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms