RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PANK3Q9H999 370 aa34.19■■■■□ 3.06
CDC42EP4-205ENST00000580315 HOXC9P31274 260 aa34.18■■■■□ 3.06
CDC42EP4-205ENST00000580315 RTL1A6NKG5 1358 aa34.17■■■■□ 3.06
CDC42EP4-205ENST00000580315 RRS1Q15050 365 aaKnown RBP34.17■■■■□ 3.06
CDC42EP4-205ENST00000580315 ZNF827Q17R98 1081 aa34.17■■■■□ 3.06
CDC42EP4-205ENST00000580315 UTRNP46939 3433 aa34.16■■■■□ 3.06
CDC42EP4-205ENST00000580315 KIF7Q2M1P5 1343 aa34.14■■■■□ 3.06
CDC42EP4-205ENST00000580315 KAT6BQ8WYB5 2073 aa34.14■■■■□ 3.06
CDC42EP4-205ENST00000580315 FAM208AQ9UK61 1670 aaKnown RBP34.12■■■■□ 3.05
CDC42EP4-205ENST00000580315 ARXQ96QS3 562 aa34.12■■■■□ 3.05
CDC42EP4-205ENST00000580315 SLC27A3Q5K4L6 730 aa34.11■■■■□ 3.05
CDC42EP4-205ENST00000580315 AKT1S1Q96B36 256 aa34.1■■■■□ 3.05
CDC42EP4-205ENST00000580315 KIF24Q5T7B8 1368 aa34.1■■■■□ 3.05
CDC42EP4-205ENST00000580315 PRIM1P49642 420 aaKnown RBP34.08■■■■□ 3.05
CDC42EP4-205ENST00000580315 SYTL4Q96C24 671 aaPredicted RBP34.07■■■■□ 3.04
CDC42EP4-205ENST00000580315 FLT4P35916 1363 aa34.07■■■■□ 3.04
CDC42EP4-205ENST00000580315 SMG6Q86US8 1419 aaKnown RBP34.06■■■■□ 3.04
CDC42EP4-205ENST00000580315 ZCRB1Q8TBF4 217 aaKnown RBP34.06■■■■□ 3.04
CDC42EP4-205ENST00000580315 KNSTRNQ9Y448 316 aa34.06■■■■□ 3.04
CDC42EP4-205ENST00000580315 NSD2O96028 1365 aa34.05■■■■□ 3.04
CDC42EP4-205ENST00000580315 MAP3K5Q99683 1374 aa34.04■■■■□ 3.04
CDC42EP4-205ENST00000580315 INSRP06213 1382 aa34.03■■■■□ 3.04
CDC42EP4-205ENST00000580315 KCNQ4P56696 695 aa34.03■■■■□ 3.04
CDC42EP4-205ENST00000580315 SLC16A10Q8TF71 515 aa34.03■■■■□ 3.04
CDC42EP4-205ENST00000580315 EMILIN1Q9Y6C2 1016 aa34.02■■■■□ 3.04
CDC42EP4-205ENST00000580315 MEGF6O75095 1541 aa34.02■■■■□ 3.04
CDC42EP4-205ENST00000580315 HSP90AB2PQ58FF8 381 aa34.01■■■■□ 3.03
CDC42EP4-205ENST00000580315 PPM1GO15355 546 aaPredicted RBP34■■■■□ 3.03
CDC42EP4-205ENST00000580315 NBPF6Q5VWK0 638 aa34■■■■□ 3.03
CDC42EP4-205ENST00000580315 ZNF784Q8NCA9 323 aaPredicted RBP34■■■■□ 3.03
CDC42EP4-205ENST00000580315 NBPF4Q96M43 638 aa34■■■■□ 3.03
CDC42EP4-205ENST00000580315 PNPLA7Q6ZV29 1317 aa34■■■■□ 3.03
CDC42EP4-205ENST00000580315 TFCP2L1Q9NZI6 479 aa33.99■■■■□ 3.03
CDC42EP4-205ENST00000580315 RGPD2P0DJD1 1756 aa33.98■■■■□ 3.03
CDC42EP4-205ENST00000580315 TNNT2P45379 298 aaPredicted RBP33.97■■■■□ 3.03
CDC42EP4-205ENST00000580315 DOT1LQ8TEK3 1739 aa33.96■■■■□ 3.03
CDC42EP4-205ENST00000580315 MORC1Q86VD1 984 aa33.95■■■■□ 3.03
CDC42EP4-205ENST00000580315 USHBP1Q8N6Y0 703 aa33.95■■■■□ 3.03
CDC42EP4-205ENST00000580315 SHANK3Q9BYB0 1731 aa33.95■■■■□ 3.03
CDC42EP4-205ENST00000580315 QSER1Q2KHR3 1735 aa33.94■■■■□ 3.02
CDC42EP4-205ENST00000580315 ANKRD26Q9UPS8 1709 aa33.94■■■■□ 3.02
CDC42EP4-205ENST00000580315 POLD1P28340 1107 aa33.94■■■■□ 3.02
CDC42EP4-205ENST00000580315 POLKQ9UBT6 870 aa33.94■■■■□ 3.02
CDC42EP4-205ENST00000580315 WASHC2AQ641Q2 1341 aa33.94■■■■□ 3.02
CDC42EP4-205ENST00000580315 RAPGEF4Q8WZA2 1011 aa33.92■■■■□ 3.02
CDC42EP4-205ENST00000580315 CCNL1Q9UK58 526 aaPredicted RBP33.92■■■■□ 3.02
CDC42EP4-205ENST00000580315 LY75O60449 1722 aa33.91■■■■□ 3.02
CDC42EP4-205ENST00000580315 KLHL34Q8N239 644 aa33.89■■■■□ 3.02
CDC42EP4-205ENST00000580315 GPR162Q16538 588 aa33.88■■■■□ 3.01
CDC42EP4-205ENST00000580315 TATP17735 454 aaPredicted RBP33.87■■■■□ 3.01
CDC42EP4-205ENST00000580315 AMER1Q5JTC6 1135 aaPredicted RBP33.87■■■■□ 3.01
CDC42EP4-205ENST00000580315 COL24A1Q17RW2 1714 aa33.87■■■■□ 3.01
CDC42EP4-205ENST00000580315 TUBGCP6Q96RT7 1819 aa33.86■■■■□ 3.01
CDC42EP4-205ENST00000580315 PER1O15534 1290 aaPredicted RBP33.84■■■■□ 3.01
CDC42EP4-205ENST00000580315 GOLGB1Q14789 3259 aaKnown RBP33.84■■■■□ 3.01
CDC42EP4-205ENST00000580315 CHD4Q14839 1912 aa33.84■■■■□ 3.01
CDC42EP4-205ENST00000580315 PCDH11XQ9BZA7 1347 aa33.81■■■■□ 3
CDC42EP4-205ENST00000580315 PCDH11YQ9BZA8 1340 aa33.81■■■■□ 3
CDC42EP4-205ENST00000580315 MAP2P11137 1827 aaKnown RBP33.81■■■■□ 3
CDC42EP4-205ENST00000580315 COL23A1Q86Y22 540 aaPredicted RBP33.81■■■■□ 3
CDC42EP4-205ENST00000580315 MSH5O43196 834 aa33.8■■■■□ 3
CDC42EP4-205ENST00000580315 NLGN2Q8NFZ4 835 aa33.8■■■■□ 3
CDC42EP4-205ENST00000580315 CYP27B1O15528 508 aa33.77■■■■□ 3
CDC42EP4-205ENST00000580315 PELP1Q8IZL8 1130 aaKnown RBP33.77■■■■□ 3
CDC42EP4-205ENST00000580315 EIF4A2Q14240 407 aaKnown RBP33.76■■■□□ 2.99
CDC42EP4-205ENST00000580315 CC2D1BQ5T0F9 858 aaKnown RBP33.76■■■□□ 2.99
CDC42EP4-205ENST00000580315 EYA1Q99502 592 aa33.76■■■□□ 2.99
CDC42EP4-205ENST00000580315 MPRIPQ6WCQ1 1025 aa33.75■■■□□ 2.99
CDC42EP4-205ENST00000580315 PALLDQ8WX93 1383 aa33.73■■■□□ 2.99
CDC42EP4-205ENST00000580315 NPC1L1Q9UHC9 1359 aa33.73■■■□□ 2.99
CDC42EP4-205ENST00000580315 NCAPD2Q15021 1401 aa33.73■■■□□ 2.99
CDC42EP4-205ENST00000580315 MSL1Q68DK7 614 aa33.72■■■□□ 2.99
CDC42EP4-205ENST00000580315 HMGB2P26583 209 aaKnown RBP33.71■■■□□ 2.99
CDC42EP4-205ENST00000580315 C5P01031 1676 aa33.68■■■□□ 2.98
CDC42EP4-205ENST00000580315 C1QTNF8P60827 252 aa33.68■■■□□ 2.98
CDC42EP4-205ENST00000580315 FLAD1Q8NFF5 587 aa33.68■■■□□ 2.98
CDC42EP4-205ENST00000580315 YBX3P16989 372 aaKnown RBP eCLIP33.66■■■□□ 2.98
CDC42EP4-205ENST00000580315 CNGB1Q14028 1251 aaPredicted RBP33.66■■■□□ 2.98
CDC42EP4-205ENST00000580315 SMARCC1Q92922 1105 aaPredicted RBP33.66■■■□□ 2.98
CDC42EP4-205ENST00000580315 SPG7Q9UQ90 795 aa33.66■■■□□ 2.98
CDC42EP4-205ENST00000580315 IGSF1Q8N6C5 1336 aa33.65■■■□□ 2.98
CDC42EP4-205ENST00000580315 NKX1-1Q15270 411 aaPredicted RBP33.65■■■□□ 2.98
CDC42EP4-205ENST00000580315 PIGBQ92521 554 aa33.65■■■□□ 2.98
CDC42EP4-205ENST00000580315 MTHFSP49914 203 aa33.64■■■□□ 2.98
CDC42EP4-205ENST00000580315 TOGARAM1Q9Y4F4 1720 aa33.63■■■□□ 2.97
CDC42EP4-205ENST00000580315 GRIN3BO60391 1043 aa33.63■■■□□ 2.97
CDC42EP4-205ENST00000580315 PKD1L3Q7Z443 1732 aa33.62■■■□□ 2.97
CDC42EP4-205ENST00000580315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.62■■■□□ 2.97
CDC42EP4-205ENST00000580315 PLEKHG2Q9H7P9 1386 aa33.6■■■□□ 2.97
CDC42EP4-205ENST00000580315 TAF1LQ8IZX4 1826 aa33.6■■■□□ 2.97
CDC42EP4-205ENST00000580315 AK7Q96M32 723 aa33.6■■■□□ 2.97
CDC42EP4-205ENST00000580315 CD2APQ9Y5K6 639 aa33.6■■■□□ 2.97
CDC42EP4-205ENST00000580315 ITGB4P16144 1822 aa33.59■■■□□ 2.97
CDC42EP4-205ENST00000580315 SENP3-EIF4A1A0A087X0R7 540 aa33.59■■■□□ 2.97
CDC42EP4-205ENST00000580315 AMIGO3Q86WK7 504 aa33.59■■■□□ 2.97
CDC42EP4-205ENST00000580315 C4BP0C0L5 1744 aa33.58■■■□□ 2.97
CDC42EP4-205ENST00000580315 IL13P35225 146 aa33.57■■■□□ 2.96
CDC42EP4-205ENST00000580315 GIGYF1O75420 1035 aaPredicted RBP33.55■■■□□ 2.96
CDC42EP4-205ENST00000580315 LOC102724428A0A0B4J2F2 783 aa33.54■■■□□ 2.96
CDC42EP4-205ENST00000580315 ZEB1P37275 1124 aaPredicted RBP33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms