RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 RTL1A6NKG5 1358 aa24.97■■□□□ 1.59
MKS1-209ENST00000580127 FYB1O15117 783 aa24.97■■□□□ 1.59
MKS1-209ENST00000580127 FBLN1P23142 703 aa24.96■■□□□ 1.59
MKS1-209ENST00000580127 GPR162Q16538 588 aa24.96■■□□□ 1.59
MKS1-209ENST00000580127 MAP3K5Q99683 1374 aa24.95■■□□□ 1.59
MKS1-209ENST00000580127 TATP17735 454 aaPredicted RBP24.95■■□□□ 1.58
MKS1-209ENST00000580127 GGNBP2Q9H3C7 697 aa24.95■■□□□ 1.58
MKS1-209ENST00000580127 RRS1Q15050 365 aaKnown RBP24.94■■□□□ 1.58
MKS1-209ENST00000580127 PAPPAQ13219 1627 aa24.94■■□□□ 1.58
MKS1-209ENST00000580127 NBPF6Q5VWK0 638 aa24.93■■□□□ 1.58
MKS1-209ENST00000580127 KLHL34Q8N239 644 aa24.93■■□□□ 1.58
MKS1-209ENST00000580127 NBPF4Q96M43 638 aa24.93■■□□□ 1.58
MKS1-209ENST00000580127 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
MKS1-209ENST00000580127 USP47Q96K76 1375 aa24.93■■□□□ 1.58
MKS1-209ENST00000580127 ZNF784Q8NCA9 323 aaPredicted RBP24.92■■□□□ 1.58
MKS1-209ENST00000580127 CHD4Q14839 1912 aa24.92■■□□□ 1.58
MKS1-209ENST00000580127 MSH5O43196 834 aa24.91■■□□□ 1.58
MKS1-209ENST00000580127 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
MKS1-209ENST00000580127 PNPLA7Q6ZV29 1317 aa24.89■■□□□ 1.58
MKS1-209ENST00000580127 KCNQ4P56696 695 aa24.89■■□□□ 1.58
MKS1-209ENST00000580127 KIF24Q5T7B8 1368 aa24.89■■□□□ 1.57
MKS1-209ENST00000580127 QSER1Q2KHR3 1735 aa24.88■■□□□ 1.57
MKS1-209ENST00000580127 RGPD2P0DJD1 1756 aa24.88■■□□□ 1.57
MKS1-209ENST00000580127 USHBP1Q8N6Y0 703 aa24.87■■□□□ 1.57
MKS1-209ENST00000580127 INSRP06213 1382 aa24.87■■□□□ 1.57
MKS1-209ENST00000580127 PCDH11XQ9BZA7 1347 aa24.86■■□□□ 1.57
MKS1-209ENST00000580127 PCDH11YQ9BZA8 1340 aa24.86■■□□□ 1.57
MKS1-209ENST00000580127 HSP90AB2PQ58FF8 381 aa24.86■■□□□ 1.57
MKS1-209ENST00000580127 FLAD1Q8NFF5 587 aa24.86■■□□□ 1.57
MKS1-209ENST00000580127 FLT4P35916 1363 aa24.85■■□□□ 1.57
MKS1-209ENST00000580127 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
MKS1-209ENST00000580127 DOT1LQ8TEK3 1739 aa24.85■■□□□ 1.57
MKS1-209ENST00000580127 MEGF6O75095 1541 aa24.85■■□□□ 1.57
MKS1-209ENST00000580127 TIMELESSQ9UNS1 1208 aa24.84■■□□□ 1.57
MKS1-209ENST00000580127 SMARCC1Q92922 1105 aaPredicted RBP24.83■■□□□ 1.57
MKS1-209ENST00000580127 LY75O60449 1722 aa24.83■■□□□ 1.57
MKS1-209ENST00000580127 NSD2O96028 1365 aa24.81■■□□□ 1.56
MKS1-209ENST00000580127 GRIN3BO60391 1043 aa24.81■■□□□ 1.56
MKS1-209ENST00000580127 MPRIPQ6WCQ1 1025 aa24.81■■□□□ 1.56
MKS1-209ENST00000580127 PPM1GO15355 546 aaPredicted RBP24.8■■□□□ 1.56
MKS1-209ENST00000580127 COL23A1Q86Y22 540 aaPredicted RBP24.8■■□□□ 1.56
MKS1-209ENST00000580127 SPG7Q9UQ90 795 aa24.8■■□□□ 1.56
MKS1-209ENST00000580127 KIF20BQ96Q89 1820 aa24.77■■□□□ 1.56
MKS1-209ENST00000580127 SHANK3Q9BYB0 1731 aa24.77■■□□□ 1.56
MKS1-209ENST00000580127 CARD14Q9BXL6 1004 aa24.76■■□□□ 1.55
MKS1-209ENST00000580127 COL24A1Q17RW2 1714 aa24.75■■□□□ 1.55
MKS1-209ENST00000580127 CYP27B1O15528 508 aa24.74■■□□□ 1.55
MKS1-209ENST00000580127 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
MKS1-209ENST00000580127 PALLDQ8WX93 1383 aa24.74■■□□□ 1.55
MKS1-209ENST00000580127 TUBGCP6Q96RT7 1819 aa24.73■■□□□ 1.55
MKS1-209ENST00000580127 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
MKS1-209ENST00000580127 AK7Q96M32 723 aa24.73■■□□□ 1.55
MKS1-209ENST00000580127 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.73■■□□□ 1.55
MKS1-209ENST00000580127 CD2APQ9Y5K6 639 aa24.73■■□□□ 1.55
MKS1-209ENST00000580127 NSD3Q9BZ95 1437 aa24.72■■□□□ 1.55
MKS1-209ENST00000580127 WASHC2AQ641Q2 1341 aa24.72■■□□□ 1.55
MKS1-209ENST00000580127 NLGN2Q8NFZ4 835 aa24.72■■□□□ 1.55
MKS1-209ENST00000580127 NKX1-1Q15270 411 aaPredicted RBP24.71■■□□□ 1.55
MKS1-209ENST00000580127 MSL1Q68DK7 614 aa24.7■■□□□ 1.54
MKS1-209ENST00000580127 GIGYF1O75420 1035 aaPredicted RBP24.68■■□□□ 1.54
MKS1-209ENST00000580127 PIGBQ92521 554 aa24.68■■□□□ 1.54
MKS1-209ENST00000580127 TMOD3Q9NYL9 352 aa24.68■■□□□ 1.54
MKS1-209ENST00000580127 C5P01031 1676 aa24.68■■□□□ 1.54
MKS1-209ENST00000580127 SENP3-EIF4A1A0A087X0R7 540 aa24.67■■□□□ 1.54
MKS1-209ENST00000580127 IFNL2Q8IZJ0 200 aa24.67■■□□□ 1.54
MKS1-209ENST00000580127 POLR3GLQ9BT43 218 aa24.67■■□□□ 1.54
MKS1-209ENST00000580127 CLSPNQ9HAW4 1339 aa24.66■■□□□ 1.54
MKS1-209ENST00000580127 EYA1Q99502 592 aa24.66■■□□□ 1.54
MKS1-209ENST00000580127 MAP2P11137 1827 aaKnown RBP24.65■■□□□ 1.54
MKS1-209ENST00000580127 UTRNP46939 3433 aa24.65■■□□□ 1.54
MKS1-209ENST00000580127 ITGB4P16144 1822 aa24.65■■□□□ 1.54
MKS1-209ENST00000580127 POLKQ9UBT6 870 aa24.64■■□□□ 1.54
MKS1-209ENST00000580127 TAF1LQ8IZX4 1826 aa24.63■■□□□ 1.53
MKS1-209ENST00000580127 LOC102724428A0A0B4J2F2 783 aa24.63■■□□□ 1.53
MKS1-209ENST00000580127 YBX3P16989 372 aaKnown RBP eCLIP24.63■■□□□ 1.53
MKS1-209ENST00000580127 SSFA2P28290 1259 aa24.63■■□□□ 1.53
MKS1-209ENST00000580127 SIK1P57059 783 aa24.63■■□□□ 1.53
MKS1-209ENST00000580127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.62■■□□□ 1.53
MKS1-209ENST00000580127 PHF14O94880 888 aa24.62■■□□□ 1.53
MKS1-209ENST00000580127 PKD1L3Q7Z443 1732 aa24.61■■□□□ 1.53
MKS1-209ENST00000580127 ATP6V1AP38606 617 aa24.6■■□□□ 1.53
MKS1-209ENST00000580127 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
MKS1-209ENST00000580127 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
MKS1-209ENST00000580127 NCAPD2Q15021 1401 aa24.6■■□□□ 1.53
MKS1-209ENST00000580127 C4BP0C0L5 1744 aa24.59■■□□□ 1.53
MKS1-209ENST00000580127 HSP90AB1P08238 724 aaKnown RBP24.59■■□□□ 1.53
MKS1-209ENST00000580127 PHKG2P15735 406 aa24.59■■□□□ 1.53
MKS1-209ENST00000580127 PLEKHG2Q9H7P9 1386 aa24.57■■□□□ 1.52
MKS1-209ENST00000580127 EIF4G2P78344 907 aaKnown RBP eCLIP24.57■■□□□ 1.52
MKS1-209ENST00000580127 ASAP1Q9ULH1 1129 aa24.57■■□□□ 1.52
MKS1-209ENST00000580127 ERVV-2B6SEH9 535 aa24.56■■□□□ 1.52
MKS1-209ENST00000580127 GNPATO15228 680 aa24.56■■□□□ 1.52
MKS1-209ENST00000580127 EIF4A2Q14240 407 aaKnown RBP24.56■■□□□ 1.52
MKS1-209ENST00000580127 PLEKHO1Q53GL0 409 aaPredicted RBP24.56■■□□□ 1.52
MKS1-209ENST00000580127 LINC00116Q8NCU8 138 aa24.55■■□□□ 1.52
MKS1-209ENST00000580127 ANKRD26Q9UPS8 1709 aa24.55■■□□□ 1.52
MKS1-209ENST00000580127 TOGARAM1Q9Y4F4 1720 aa24.54■■□□□ 1.52
MKS1-209ENST00000580127 AMOTQ4VCS5 1084 aa24.53■■□□□ 1.52
MKS1-209ENST00000580127 TRAPPC3LQ5T215 181 aa24.53■■□□□ 1.52
MKS1-209ENST00000580127 DCAF5Q96JK2 942 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms