RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
CCDC178-209ENST00000579947 SBF1O95248 1867 aa9.36□□□□□ -0.91
CCDC178-209ENST00000579947 RGPD5Q99666 1765 aa9.36□□□□□ -0.91
CCDC178-209ENST00000579947 VEGFAP15692 232 aaPredicted RBP9.35□□□□□ -0.91
CCDC178-209ENST00000579947 TOGARAM1Q9Y4F4 1720 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 VEGFBP49765 207 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 POTEDQ86YR6 584 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 CFAP44Q96MT7 982 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 BCS1LQ9Y276 419 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 WASLO00401 505 aaPredicted RBP9.35□□□□□ -0.91
CCDC178-209ENST00000579947 DLL1O00548 723 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 TGFB2P61812 414 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC178-209ENST00000579947 PCNTO95613 3336 aa9.35□□□□□ -0.91
CCDC178-209ENST00000579947 ABTB2Q8N961 1025 aa9.34□□□□□ -0.91
CCDC178-209ENST00000579947 TAF1LQ8IZX4 1826 aa9.33□□□□□ -0.92
CCDC178-209ENST00000579947 KCNQ4P56696 695 aa9.33□□□□□ -0.92
CCDC178-209ENST00000579947 RNF181Q9P0P0 153 aa9.33□□□□□ -0.92
CCDC178-209ENST00000579947 POGKQ9P215 609 aa9.33□□□□□ -0.92
CCDC178-209ENST00000579947 MAP2K1Q02750 393 aaPredicted RBP9.33□□□□□ -0.92
CCDC178-209ENST00000579947 C14orf93Q9H972 538 aaKnown RBP9.33□□□□□ -0.92
CCDC178-209ENST00000579947 DOT1LQ8TEK3 1739 aa9.33□□□□□ -0.92
CCDC178-209ENST00000579947 CPSF1Q10570 1443 aaKnown RBP9.33□□□□□ -0.92
CCDC178-209ENST00000579947 HMGB2P26583 209 aaKnown RBP9.32□□□□□ -0.92
CCDC178-209ENST00000579947 MCOLN1Q9GZU1 580 aa9.32□□□□□ -0.92
CCDC178-209ENST00000579947 CCNL1Q9UK58 526 aaPredicted RBP9.32□□□□□ -0.92
CCDC178-209ENST00000579947 KDM6AO15550 1401 aaPredicted RBP9.32□□□□□ -0.92
CCDC178-209ENST00000579947 NSD2O96028 1365 aa9.32□□□□□ -0.92
CCDC178-209ENST00000579947 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
CCDC178-209ENST00000579947 PDE4DIPQ5VU43 2346 aa9.32□□□□□ -0.92
CCDC178-209ENST00000579947 PITPNM2Q9BZ72 1349 aa9.32□□□□□ -0.92
CCDC178-209ENST00000579947 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
CCDC178-209ENST00000579947 AXIN2Q9Y2T1 843 aa9.31□□□□□ -0.92
CCDC178-209ENST00000579947 UBR3Q6ZT12 1888 aa9.31□□□□□ -0.92
CCDC178-209ENST00000579947 LTBP1Q14766 1721 aa9.3□□□□□ -0.92
CCDC178-209ENST00000579947 FCHSD2O94868 740 aa9.3□□□□□ -0.92
CCDC178-209ENST00000579947 FAM50AQ14320 339 aaKnown RBP9.3□□□□□ -0.92
CCDC178-209ENST00000579947 HABP4Q5JVS0 413 aaKnown RBP9.3□□□□□ -0.92
CCDC178-209ENST00000579947 ZBTB7CA1YPR0 619 aa9.3□□□□□ -0.92
CCDC178-209ENST00000579947 GLTPD2A6NH11 291 aa9.3□□□□□ -0.92
CCDC178-209ENST00000579947 CHADLQ6NUI6 762 aa9.3□□□□□ -0.92
CCDC178-209ENST00000579947 ANKRD36BQ8N2N9 1353 aa9.3□□□□□ -0.92
CCDC178-209ENST00000579947 C4BP0C0L5 1744 aa9.3□□□□□ -0.92
CCDC178-209ENST00000579947 PASKQ96RG2 1323 aa9.29□□□□□ -0.92
CCDC178-209ENST00000579947 NSD3Q9BZ95 1437 aa9.29□□□□□ -0.92
CCDC178-209ENST00000579947 NUDT16Q96DE0 195 aaKnown RBP9.29□□□□□ -0.92
CCDC178-209ENST00000579947 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
CCDC178-209ENST00000579947 ACEP12821 1306 aa9.29□□□□□ -0.92
CCDC178-209ENST00000579947 MINK1Q8N4C8 1332 aaPredicted RBP9.29□□□□□ -0.92
CCDC178-209ENST00000579947 ADGRB1O14514 1584 aa9.28□□□□□ -0.92
CCDC178-209ENST00000579947 A0A0G2JLW4 131 aa9.28□□□□□ -0.92
CCDC178-209ENST00000579947 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
CCDC178-209ENST00000579947 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
CCDC178-209ENST00000579947 RASSF10A6NK89 507 aa9.27□□□□□ -0.93
CCDC178-209ENST00000579947 POTECB2RU33 542 aa9.27□□□□□ -0.93
CCDC178-209ENST00000579947 ERBB3P21860 1342 aa9.27□□□□□ -0.93
CCDC178-209ENST00000579947 DPEP1P16444 411 aa9.26□□□□□ -0.93
CCDC178-209ENST00000579947 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
CCDC178-209ENST00000579947 IL2RBP14784 551 aa9.26□□□□□ -0.93
CCDC178-209ENST00000579947 WDR33Q9C0J8 1336 aaKnown RBP9.25□□□□□ -0.93
CCDC178-209ENST00000579947 C4AP0C0L4 1744 aa9.25□□□□□ -0.93
CCDC178-209ENST00000579947 ARHGEF25Q86VW2 580 aa9.25□□□□□ -0.93
CCDC178-209ENST00000579947 KCNA3P22001 575 aa9.24□□□□□ -0.93
CCDC178-209ENST00000579947 CFAP70Q5T0N1 1121 aa9.24□□□□□ -0.93
CCDC178-209ENST00000579947 PRIM1P49642 420 aaKnown RBP9.23□□□□□ -0.93
CCDC178-209ENST00000579947 FXR1P51114 621 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCDC178-209ENST00000579947 SOX10P56693 466 aa9.23□□□□□ -0.93
CCDC178-209ENST00000579947 DGKZQ13574 1117 aa9.23□□□□□ -0.93
CCDC178-209ENST00000579947 USP47Q96K76 1375 aa9.23□□□□□ -0.93
CCDC178-209ENST00000579947 DEFB115Q30KQ5 88 aa9.23□□□□□ -0.93
CCDC178-209ENST00000579947 NBPF15Q8N660 670 aa9.23□□□□□ -0.93
CCDC178-209ENST00000579947 KAT6BQ8WYB5 2073 aa9.23□□□□□ -0.93
CCDC178-209ENST00000579947 NFAT5O94916 1531 aa9.22□□□□□ -0.93
CCDC178-209ENST00000579947 PIM2Q9P1W9 311 aa9.22□□□□□ -0.93
CCDC178-209ENST00000579947 SSFA2P28290 1259 aa9.22□□□□□ -0.93
CCDC178-209ENST00000579947 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
CCDC178-209ENST00000579947 DALRD3Q5D0E6 543 aaKnown RBP9.21□□□□□ -0.93
CCDC178-209ENST00000579947 MMP10P09238 476 aa9.21□□□□□ -0.93
CCDC178-209ENST00000579947 AMIGO3Q86WK7 504 aa9.21□□□□□ -0.93
CCDC178-209ENST00000579947 AK7Q96M32 723 aa9.21□□□□□ -0.93
CCDC178-209ENST00000579947 NLRP6P59044 892 aa9.21□□□□□ -0.94
CCDC178-209ENST00000579947 CCDC87Q9NVE4 849 aa9.21□□□□□ -0.94
CCDC178-209ENST00000579947 CCDC61Q9Y6R9 512 aa9.21□□□□□ -0.94
CCDC178-209ENST00000579947 LMNB1P20700 586 aa9.2□□□□□ -0.94
CCDC178-209ENST00000579947 SYTL4Q96C24 671 aaPredicted RBP9.2□□□□□ -0.94
CCDC178-209ENST00000579947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.2□□□□□ -0.94
CCDC178-209ENST00000579947 CA12O43570 354 aa9.2□□□□□ -0.94
CCDC178-209ENST00000579947 RGL3Q3MIN7 710 aa9.2□□□□□ -0.94
CCDC178-209ENST00000579947 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
CCDC178-209ENST00000579947 KCNH5Q8NCM2 988 aa9.19□□□□□ -0.94
CCDC178-209ENST00000579947 ADAMTSL1Q8N6G6 1762 aa9.19□□□□□ -0.94
CCDC178-209ENST00000579947 FAM208AQ9UK61 1670 aaKnown RBP9.19□□□□□ -0.94
CCDC178-209ENST00000579947 LDHDQ86WU2 507 aa9.18□□□□□ -0.94
CCDC178-209ENST00000579947 TRAK1Q9UPV9 953 aa9.18□□□□□ -0.94
CCDC178-209ENST00000579947 CCDC88AQ3V6T2 1871 aa9.18□□□□□ -0.94
CCDC178-209ENST00000579947 DICER1Q9UPY3 1922 aaKnown RBP9.18□□□□□ -0.94
CCDC178-209ENST00000579947 ITGBL1O95965 494 aaPredicted RBP9.18□□□□□ -0.94
CCDC178-209ENST00000579947 RASSF7Q02833 373 aa9.18□□□□□ -0.94
CCDC178-209ENST00000579947 SLC17A8Q8NDX2 589 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms