RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
GGA3-208ENST00000579743 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
GGA3-208ENST00000579743 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
GGA3-208ENST00000579743 KIF20BQ96Q89 1820 aa18.94■□□□□ 0.62
GGA3-208ENST00000579743 BTAF1O14981 1849 aa18.93■□□□□ 0.62
GGA3-208ENST00000579743 ATF5Q9Y2D1 282 aaPredicted RBP18.93■□□□□ 0.62
GGA3-208ENST00000579743 PPM1GO15355 546 aaPredicted RBP18.92■□□□□ 0.62
GGA3-208ENST00000579743 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
GGA3-208ENST00000579743 CARD14Q9BXL6 1004 aa18.92■□□□□ 0.62
GGA3-208ENST00000579743 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
GGA3-208ENST00000579743 PCDH11XQ9BZA7 1347 aa18.91■□□□□ 0.62
GGA3-208ENST00000579743 PCDH11YQ9BZA8 1340 aa18.91■□□□□ 0.62
GGA3-208ENST00000579743 CASZ1Q86V15 1759 aa18.91■□□□□ 0.62
GGA3-208ENST00000579743 SLC16A10Q8TF71 515 aa18.89■□□□□ 0.61
GGA3-208ENST00000579743 PDGFDQ9GZP0 370 aaPredicted RBP18.89■□□□□ 0.61
GGA3-208ENST00000579743 TFCP2L1Q9NZI6 479 aa18.89■□□□□ 0.61
GGA3-208ENST00000579743 MEGF6O75095 1541 aa18.89■□□□□ 0.61
GGA3-208ENST00000579743 RGPD2P0DJD1 1756 aa18.87■□□□□ 0.61
GGA3-208ENST00000579743 PTGER2P43116 358 aa18.87■□□□□ 0.61
GGA3-208ENST00000579743 LRRC4BQ9NT99 713 aa18.87■□□□□ 0.61
GGA3-208ENST00000579743 EMILIN1Q9Y6C2 1016 aa18.87■□□□□ 0.61
GGA3-208ENST00000579743 MYOM1P52179 1685 aa18.86■□□□□ 0.61
GGA3-208ENST00000579743 YY1P25490 414 aa18.86■□□□□ 0.61
GGA3-208ENST00000579743 POLD1P28340 1107 aa18.86■□□□□ 0.61
GGA3-208ENST00000579743 CCNL1Q9UK58 526 aaPredicted RBP18.86■□□□□ 0.61
GGA3-208ENST00000579743 SPG7Q9UQ90 795 aa18.86■□□□□ 0.61
GGA3-208ENST00000579743 WASHC2AQ641Q2 1341 aa18.85■□□□□ 0.61
GGA3-208ENST00000579743 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
GGA3-208ENST00000579743 ARXQ96QS3 562 aa18.85■□□□□ 0.61
GGA3-208ENST00000579743 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
GGA3-208ENST00000579743 ZNF827Q17R98 1081 aa18.84■□□□□ 0.61
GGA3-208ENST00000579743 HSPA5P11021 654 aaKnown RBP18.83■□□□□ 0.6
GGA3-208ENST00000579743 FHDC1Q9C0D6 1143 aaPredicted RBP18.83■□□□□ 0.6
GGA3-208ENST00000579743 PAPPAQ13219 1627 aa18.82■□□□□ 0.6
GGA3-208ENST00000579743 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
GGA3-208ENST00000579743 SYT17Q9BSW7 474 aa18.82■□□□□ 0.6
GGA3-208ENST00000579743 MSH5O43196 834 aa18.81■□□□□ 0.6
GGA3-208ENST00000579743 TNNT2P45379 298 aaPredicted RBP18.81■□□□□ 0.6
GGA3-208ENST00000579743 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
GGA3-208ENST00000579743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.67e-6■■□□□ 12.8
GGA3-208ENST00000579743 POLKQ9UBT6 870 aa18.8■□□□□ 0.6
GGA3-208ENST00000579743 NSD2O96028 1365 aa18.8■□□□□ 0.6
GGA3-208ENST00000579743 FLAD1Q8NFF5 587 aa18.79■□□□□ 0.6
GGA3-208ENST00000579743 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
GGA3-208ENST00000579743 PANK3Q9H999 370 aa18.79■□□□□ 0.6
GGA3-208ENST00000579743 SHANK3Q9BYB0 1731 aa18.79■□□□□ 0.6
GGA3-208ENST00000579743 PNPLA7Q6ZV29 1317 aa18.78■□□□□ 0.6
GGA3-208ENST00000579743 CYP27B1O15528 508 aa18.78■□□□□ 0.6
GGA3-208ENST00000579743 KCNQ4P56696 695 aa18.78■□□□□ 0.6
GGA3-208ENST00000579743 EYA1Q99502 592 aa18.78■□□□□ 0.6
GGA3-208ENST00000579743 MAP2P11137 1827 aaKnown RBP18.78■□□□□ 0.6
GGA3-208ENST00000579743 LY75O60449 1722 aa18.77■□□□□ 0.6
GGA3-208ENST00000579743 KNSTRNQ9Y448 316 aa18.77■□□□□ 0.6
GGA3-208ENST00000579743 MORC1Q86VD1 984 aa18.76■□□□□ 0.59
GGA3-208ENST00000579743 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
GGA3-208ENST00000579743 KLHL34Q8N239 644 aa18.76■□□□□ 0.59
GGA3-208ENST00000579743 QSER1Q2KHR3 1735 aa18.76■□□□□ 0.59
GGA3-208ENST00000579743 PALLDQ8WX93 1383 aa18.76■□□□□ 0.59
GGA3-208ENST00000579743 MAP3K5Q99683 1374 aa18.76■□□□□ 0.59
GGA3-208ENST00000579743 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
GGA3-208ENST00000579743 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
GGA3-208ENST00000579743 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
GGA3-208ENST00000579743 PLEKHG2Q9H7P9 1386 aa18.74■□□□□ 0.59
GGA3-208ENST00000579743 TMOD3Q9NYL9 352 aa18.74■□□□□ 0.59
GGA3-208ENST00000579743 EIF4A2Q14240 407 aaKnown RBP18.73■□□□□ 0.59
GGA3-208ENST00000579743 AK7Q96M32 723 aa18.73■□□□□ 0.59
GGA3-208ENST00000579743 PKD1L3Q7Z443 1732 aa18.72■□□□□ 0.59
GGA3-208ENST00000579743 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
GGA3-208ENST00000579743 GPR162Q16538 588 aa18.72■□□□□ 0.59
GGA3-208ENST00000579743 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
GGA3-208ENST00000579743 PIGBQ92521 554 aa18.71■□□□□ 0.59
GGA3-208ENST00000579743 PHKG2P15735 406 aa18.7■□□□□ 0.58
GGA3-208ENST00000579743 AMOTQ4VCS5 1084 aa18.7■□□□□ 0.58
GGA3-208ENST00000579743 COL23A1Q86Y22 540 aaPredicted RBP18.7■□□□□ 0.58
GGA3-208ENST00000579743 C5P01031 1676 aa18.68■□□□□ 0.58
GGA3-208ENST00000579743 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
GGA3-208ENST00000579743 LOC102724428A0A0B4J2F2 783 aa18.67■□□□□ 0.58
GGA3-208ENST00000579743 SIK1P57059 783 aa18.67■□□□□ 0.58
GGA3-208ENST00000579743 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
GGA3-208ENST00000579743 ITGB4P16144 1822 aa18.67■□□□□ 0.58
GGA3-208ENST00000579743 ERVV-2B6SEH9 535 aa18.66■□□□□ 0.58
GGA3-208ENST00000579743 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
GGA3-208ENST00000579743 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
GGA3-208ENST00000579743 ATP6V1AP38606 617 aa18.65■□□□□ 0.58
GGA3-208ENST00000579743 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
GGA3-208ENST00000579743 SSFA2P28290 1259 aa18.64■□□□□ 0.57
GGA3-208ENST00000579743 MSL1Q68DK7 614 aa18.64■□□□□ 0.57
GGA3-208ENST00000579743 ZNF530Q6P9A1 599 aaPredicted RBP18.64■□□□□ 0.57
GGA3-208ENST00000579743 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
GGA3-208ENST00000579743 PHF14O94880 888 aa18.63■□□□□ 0.57
GGA3-208ENST00000579743 CABP4P57796 275 aa18.63■□□□□ 0.57
GGA3-208ENST00000579743 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
GGA3-208ENST00000579743 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
GGA3-208ENST00000579743 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
GGA3-208ENST00000579743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.62■□□□□ 0.57
GGA3-208ENST00000579743 MTHFSP49914 203 aa18.62■□□□□ 0.57
GGA3-208ENST00000579743 CD2APQ9Y5K6 639 aa18.62■□□□□ 0.57
GGA3-208ENST00000579743 TAF1LQ8IZX4 1826 aa18.62■□□□□ 0.57
GGA3-208ENST00000579743 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
GGA3-208ENST00000579743 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms