RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-208ENST00000578830 TNS2Q63HR2 1409 aa12.59□□□□□ -0.39
NUP85-208ENST00000578830 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
NUP85-208ENST00000578830 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
NUP85-208ENST00000578830 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
NUP85-208ENST00000578830 CCDC7Q96M83 1385 aa12.58□□□□□ -0.4
NUP85-208ENST00000578830 EXOC5O00471 708 aa12.58□□□□□ -0.4
NUP85-208ENST00000578830 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
NUP85-208ENST00000578830 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
NUP85-208ENST00000578830 CCER1Q8TC90 406 aaPredicted RBP12.57□□□□□ -0.4
NUP85-208ENST00000578830 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
NUP85-208ENST00000578830 ZNF784Q8NCA9 323 aaPredicted RBP12.56□□□□□ -0.4
NUP85-208ENST00000578830 SYT17Q9BSW7 474 aa12.56□□□□□ -0.4
NUP85-208ENST00000578830 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
NUP85-208ENST00000578830 FAM208AQ9UK61 1670 aaKnown RBP12.56□□□□□ -0.4
NUP85-208ENST00000578830 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
NUP85-208ENST00000578830 SOX12O15370 315 aa12.55□□□□□ -0.4
NUP85-208ENST00000578830 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
NUP85-208ENST00000578830 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
NUP85-208ENST00000578830 MIER1Q8N108 512 aa12.54□□□□□ -0.4
NUP85-208ENST00000578830 GABBR2O75899 941 aa12.53□□□□□ -0.4
NUP85-208ENST00000578830 L3MBTL2Q969R5 705 aa12.53□□□□□ -0.4
NUP85-208ENST00000578830 LY75O60449 1722 aa12.53□□□□□ -0.4
NUP85-208ENST00000578830 MAP3K5Q99683 1374 aa12.53□□□□□ -0.4
NUP85-208ENST00000578830 RGPD2P0DJD1 1756 aa12.52□□□□□ -0.41
NUP85-208ENST00000578830 ERBB3P21860 1342 aa12.52□□□□□ -0.41
NUP85-208ENST00000578830 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
NUP85-208ENST00000578830 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
NUP85-208ENST00000578830 ARXQ96QS3 562 aa12.51□□□□□ -0.41
NUP85-208ENST00000578830 ROCK2O75116 1388 aaKnown RBP12.51□□□□□ -0.41
NUP85-208ENST00000578830 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
NUP85-208ENST00000578830 IL2RBP14784 551 aa12.5□□□□□ -0.41
NUP85-208ENST00000578830 SHANK3Q9BYB0 1731 aa12.5□□□□□ -0.41
NUP85-208ENST00000578830 CD163L1Q9NR16 1453 aa12.49□□□□□ -0.41
NUP85-208ENST00000578830 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
NUP85-208ENST00000578830 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
NUP85-208ENST00000578830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
NUP85-208ENST00000578830 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
NUP85-208ENST00000578830 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
NUP85-208ENST00000578830 ZNF827Q17R98 1081 aa12.47□□□□□ -0.41
NUP85-208ENST00000578830 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
NUP85-208ENST00000578830 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
NUP85-208ENST00000578830 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
NUP85-208ENST00000578830 TAF1LQ8IZX4 1826 aa12.46□□□□□ -0.41
NUP85-208ENST00000578830 SLC27A3Q5K4L6 730 aa12.46□□□□□ -0.41
NUP85-208ENST00000578830 NME9Q86XW9 330 aa12.46□□□□□ -0.41
NUP85-208ENST00000578830 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.41
NUP85-208ENST00000578830 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
NUP85-208ENST00000578830 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
NUP85-208ENST00000578830 GPR162Q16538 588 aa12.45□□□□□ -0.42
NUP85-208ENST00000578830 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
NUP85-208ENST00000578830 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
NUP85-208ENST00000578830 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
NUP85-208ENST00000578830 C5P01031 1676 aa12.44□□□□□ -0.42
NUP85-208ENST00000578830 POLD1P28340 1107 aa12.43□□□□□ -0.42
NUP85-208ENST00000578830 PNPLA7Q6ZV29 1317 aa12.42□□□□□ -0.42
NUP85-208ENST00000578830 ITGB4P16144 1822 aa12.42□□□□□ -0.42
NUP85-208ENST00000578830 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
NUP85-208ENST00000578830 IP6K1Q92551 441 aa12.42□□□□□ -0.42
NUP85-208ENST00000578830 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
NUP85-208ENST00000578830 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
NUP85-208ENST00000578830 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
NUP85-208ENST00000578830 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
NUP85-208ENST00000578830 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
NUP85-208ENST00000578830 TFCP2L1Q9NZI6 479 aa12.41□□□□□ -0.42
NUP85-208ENST00000578830 A0A1W2PP64 1363 aa12.41□□□□□ -0.42
NUP85-208ENST00000578830 ANKRD36BQ8N2N9 1353 aa12.41□□□□□ -0.42
NUP85-208ENST00000578830 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
NUP85-208ENST00000578830 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
NUP85-208ENST00000578830 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
NUP85-208ENST00000578830 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
NUP85-208ENST00000578830 NSD2O96028 1365 aa12.39□□□□□ -0.43
NUP85-208ENST00000578830 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
NUP85-208ENST00000578830 PELP1Q8IZL8 1130 aaKnown RBP12.38□□□□□ -0.43
NUP85-208ENST00000578830 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
NUP85-208ENST00000578830 LTV1Q96GA3 475 aaPredicted RBP12.38□□□□□ -0.43
NUP85-208ENST00000578830 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
NUP85-208ENST00000578830 KIF20BQ96Q89 1820 aa12.38□□□□□ -0.43
NUP85-208ENST00000578830 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
NUP85-208ENST00000578830 KCNQ4P56696 695 aa12.37□□□□□ -0.43
NUP85-208ENST00000578830 NLGN2Q8NFZ4 835 aa12.37□□□□□ -0.43
NUP85-208ENST00000578830 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
NUP85-208ENST00000578830 MEGF6O75095 1541 aa12.37□□□□□ -0.43
NUP85-208ENST00000578830 GRIN3BO60391 1043 aa12.36□□□□□ -0.43
NUP85-208ENST00000578830 HOXC9P31274 260 aa12.36□□□□□ -0.43
NUP85-208ENST00000578830 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
NUP85-208ENST00000578830 MAP3K19Q56UN5 1328 aa12.36□□□□□ -0.43
NUP85-208ENST00000578830 TONSLQ96HA7 1378 aa12.35□□□□□ -0.43
NUP85-208ENST00000578830 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
NUP85-208ENST00000578830 COG3Q96JB2 828 aa12.35□□□□□ -0.43
NUP85-208ENST00000578830 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
NUP85-208ENST00000578830 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 RTL1A6NKG5 1358 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 USP47Q96K76 1375 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
NUP85-208ENST00000578830 AMPHP49418 695 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 PKD1L3Q7Z443 1732 aa12.34□□□□□ -0.43
NUP85-208ENST00000578830 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms