RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 RTL5Q5HYW3 569 aaPredicted RBP6.15□□□□□ -1.42
PTPRM-209ENST00000578698 INTS6LQ5JSJ4 861 aaKnown RBP6.15□□□□□ -1.42
PTPRM-209ENST00000578698 GALNT6Q8NCL4 622 aa6.15□□□□□ -1.42
PTPRM-209ENST00000578698 A6NJR5 290 aa6.14□□□□□ -1.43
PTPRM-209ENST00000578698 PHF20L1A8MW92 1017 aa6.14□□□□□ -1.43
PTPRM-209ENST00000578698 ADAM23O75077 832 aa6.14□□□□□ -1.43
PTPRM-209ENST00000578698 PDXDC2PQ6P474 469 aa6.14□□□□□ -1.43
PTPRM-209ENST00000578698 PODNQ7Z5L7 613 aa6.14□□□□□ -1.43
PTPRM-209ENST00000578698 PROCA1Q8NCQ7 364 aaPredicted RBP6.14□□□□□ -1.43
PTPRM-209ENST00000578698 GAS6Q14393 721 aa6.13□□□□□ -1.43
PTPRM-209ENST00000578698 TUSC1Q2TAM9 212 aa6.13□□□□□ -1.43
PTPRM-209ENST00000578698 NEDD1Q8NHV4 660 aa6.13□□□□□ -1.43
PTPRM-209ENST00000578698 DCAF5Q96JK2 942 aa6.13□□□□□ -1.43
PTPRM-209ENST00000578698 SPOCK3Q9BQ16 436 aa6.13□□□□□ -1.43
PTPRM-209ENST00000578698 FKBPLQ9UIM3 349 aa6.13□□□□□ -1.43
PTPRM-209ENST00000578698 CNTNAP5Q8WYK1 1306 aa6.13□□□□□ -1.43
PTPRM-209ENST00000578698 GPR25O00155 361 aa6.12□□□□□ -1.43
PTPRM-209ENST00000578698 RAD21O60216 631 aa6.12□□□□□ -1.43
PTPRM-209ENST00000578698 TRAK2O60296 914 aa6.12□□□□□ -1.43
PTPRM-209ENST00000578698 FOXD4L5Q5VV16 416 aaPredicted RBP6.12□□□□□ -1.43
PTPRM-209ENST00000578698 LYSMD3Q7Z3D4 306 aa6.12□□□□□ -1.43
PTPRM-209ENST00000578698 PROSER2Q86WR7 435 aaPredicted RBP6.12□□□□□ -1.43
PTPRM-209ENST00000578698 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPRM-209ENST00000578698 TMPRSS4Q9NRS4 437 aa6.12□□□□□ -1.43
PTPRM-209ENST00000578698 CUEDC1Q9NWM3 386 aaPredicted RBP6.12□□□□□ -1.43
PTPRM-209ENST00000578698 ADH1AP07327 375 aa6.11□□□□□ -1.43
PTPRM-209ENST00000578698 CTDSPL2Q05D32 466 aa6.11□□□□□ -1.43
PTPRM-209ENST00000578698 PRICKLE2Q7Z3G6 844 aa6.11□□□□□ -1.43
PTPRM-209ENST00000578698 BEND7Q8N7W2 519 aaPredicted RBP6.11□□□□□ -1.43
PTPRM-209ENST00000578698 ZNF784Q8NCA9 323 aaPredicted RBP6.11□□□□□ -1.43
PTPRM-209ENST00000578698 MBIPQ9NS73 344 aa6.11□□□□□ -1.43
PTPRM-209ENST00000578698 RHOQP17081 205 aa6.1□□□□□ -1.43
PTPRM-209ENST00000578698 NBPF20Q3BBV1 942 aa6.1□□□□□ -1.43
PTPRM-209ENST00000578698 FOXR1Q6PIV2 292 aa6.1□□□□□ -1.43
PTPRM-209ENST00000578698 CCDC82Q8N4S0 544 aa6.1□□□□□ -1.43
PTPRM-209ENST00000578698 LRRN4Q8WUT4 740 aa6.1□□□□□ -1.43
PTPRM-209ENST00000578698 IGF1RP08069 1367 aa6.09□□□□□ -1.43
PTPRM-209ENST00000578698 RFC5P40937 340 aa6.09□□□□□ -1.43
PTPRM-209ENST00000578698 PTGIRP43119 386 aa6.09□□□□□ -1.43
PTPRM-209ENST00000578698 PTK2Q05397 1052 aa6.09□□□□□ -1.43
PTPRM-209ENST00000578698 RIPOR1Q6ZS17 1223 aa6.09□□□□□ -1.43
PTPRM-209ENST00000578698 ADAM32Q8TC27 787 aa6.09□□□□□ -1.43
PTPRM-209ENST00000578698 ZNF837Q96EG3 531 aaPredicted RBP6.09□□□□□ -1.43
PTPRM-209ENST00000578698 BCRP11274 1271 aa6.08□□□□□ -1.44
PTPRM-209ENST00000578698 NR6A1Q15406 480 aa6.08□□□□□ -1.44
PTPRM-209ENST00000578698 POM121Q96HA1 1249 aa6.08□□□□□ -1.44
PTPRM-209ENST00000578698 ZC3H4Q9UPT8 1303 aaKnown RBP6.07□□□□□ -1.44
PTPRM-209ENST00000578698 ERVH48-1M5A8F1 160 aa6.07□□□□□ -1.44
PTPRM-209ENST00000578698 PROCP04070 461 aa6.07□□□□□ -1.44
PTPRM-209ENST00000578698 ITGB2P05107 769 aa6.07□□□□□ -1.44
PTPRM-209ENST00000578698 ADD1P35611 737 aaKnown RBP6.07□□□□□ -1.44
PTPRM-209ENST00000578698 K7ELQ4 463 aaPredicted RBP6.06□□□□□ -1.44
PTPRM-209ENST00000578698 PDIA4P13667 645 aaKnown RBP6.06□□□□□ -1.44
PTPRM-209ENST00000578698 DZIP3Q86Y13 1208 aaKnown RBP6.06□□□□□ -1.44
PTPRM-209ENST00000578698 TRIM22Q8IYM9 498 aa6.06□□□□□ -1.44
PTPRM-209ENST00000578698 BANK1Q8NDB2 785 aa6.06□□□□□ -1.44
PTPRM-209ENST00000578698 GTPBP3Q969Y2 492 aaKnown RBP6.06□□□□□ -1.44
PTPRM-209ENST00000578698 GMCL1Q96IK5 515 aa6.06□□□□□ -1.44
PTPRM-209ENST00000578698 TRERF1Q96PN7 1200 aa6.06□□□□□ -1.44
PTPRM-209ENST00000578698 OCSTAMPQ9BR26 566 aa6.06□□□□□ -1.44
PTPRM-209ENST00000578698 CYLDQ9NQC7 956 aa6.06□□□□□ -1.44
PTPRM-209ENST00000578698 LILRA1O75019 489 aa6.05□□□□□ -1.44
PTPRM-209ENST00000578698 TMEM259Q4ZIN3 620 aa6.05□□□□□ -1.44
PTPRM-209ENST00000578698 ACDQ96AP0 544 aa6.05□□□□□ -1.44
PTPRM-209ENST00000578698 CCDC97Q96F63 343 aaPredicted RBP6.05□□□□□ -1.44
PTPRM-209ENST00000578698 GAS2L1Q99501 681 aaPredicted RBP6.05□□□□□ -1.44
PTPRM-209ENST00000578698 ZNF777Q9ULD5 760 aaPredicted RBP6.05□□□□□ -1.44
PTPRM-209ENST00000578698 COG6Q9Y2V7 657 aa6.05□□□□□ -1.44
PTPRM-209ENST00000578698 H7C1W4 665 aa6.04□□□□□ -1.44
PTPRM-209ENST00000578698 MEN1O00255 615 aa6.04□□□□□ -1.44
PTPRM-209ENST00000578698 MX2P20592 715 aa6.04□□□□□ -1.44
PTPRM-209ENST00000578698 RNF144AP50876 292 aaPredicted RBP6.04□□□□□ -1.44
PTPRM-209ENST00000578698 DBN1Q16643 649 aa6.04□□□□□ -1.44
PTPRM-209ENST00000578698 PPP2R2DQ66LE6 453 aa6.04□□□□□ -1.44
PTPRM-209ENST00000578698 FNBP4Q8N3X1 1017 aaPredicted RBP6.04□□□□□ -1.44
PTPRM-209ENST00000578698 KDF1Q8NAX2 398 aaPredicted RBP6.04□□□□□ -1.44
PTPRM-209ENST00000578698 SNRKQ9NRH2 765 aa6.04□□□□□ -1.44
PTPRM-209ENST00000578698 GPSM3Q9Y4H4 160 aa6.04□□□□□ -1.44
PTPRM-209ENST00000578698 ZBTB7CA1YPR0 619 aa6.03□□□□□ -1.44
PTPRM-209ENST00000578698 PNMA1Q8ND90 353 aa6.03□□□□□ -1.44
PTPRM-209ENST00000578698 NSFL1CQ9UNZ2 370 aaKnown RBP6.03□□□□□ -1.44
PTPRM-209ENST00000578698 ATP5J2-PTCD1G3V325 749 aa6.02□□□□□ -1.45
PTPRM-209ENST00000578698 BAG6P46379 1132 aa6.02□□□□□ -1.45
PTPRM-209ENST00000578698 SLC27A3Q5K4L6 730 aa6.02□□□□□ -1.45
PTPRM-209ENST00000578698 FBXO31Q5XUX0 539 aaPredicted RBP6.02□□□□□ -1.45
PTPRM-209ENST00000578698 WWC1Q8IX03 1113 aa6.02□□□□□ -1.45
PTPRM-209ENST00000578698 MTMR14Q8NCE2 650 aa6.02□□□□□ -1.45
PTPRM-209ENST00000578698 TRIM52Q96A61 297 aa6.02□□□□□ -1.45
PTPRM-209ENST00000578698 PRM3Q9NNZ6 103 aa6.02□□□□□ -1.45
PTPRM-209ENST00000578698 AP1G2O75843 785 aa6.01□□□□□ -1.45
PTPRM-209ENST00000578698 Q8N3U1 123 aa6.01□□□□□ -1.45
PTPRM-209ENST00000578698 RRAGCQ9HB90 399 aa6.01□□□□□ -1.45
PTPRM-209ENST00000578698 SERPINA10Q9UK55 444 aa6.01□□□□□ -1.45
PTPRM-209ENST00000578698 ZNF330Q9Y3S2 320 aaPredicted RBP6.01□□□□□ -1.45
PTPRM-209ENST00000578698 CCDC9Q9Y3X0 531 aaKnown RBP6.01□□□□□ -1.45
PTPRM-209ENST00000578698 DYRK1BQ9Y463 629 aa6.01□□□□□ -1.45
PTPRM-209ENST00000578698 SOCS7O14512 581 aa6□□□□□ -1.45
PTPRM-209ENST00000578698 OIP5O43482 229 aa6□□□□□ -1.45
PTPRM-209ENST00000578698 FURINP09958 794 aa6□□□□□ -1.45
PTPRM-209ENST00000578698 ABL2P42684 1182 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms