RNA–Protein interactions for RNA: ENST00000578619.1

GAREM1-203, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

TSL 4

Gene GAREM1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-203ENST00000578619 EHBP1L1Q8N3D4 1523 aa6.96□□□□□ -1.3
GAREM1-203ENST00000578619 NWD2Q9ULI1 1742 aa6.96□□□□□ -1.3
GAREM1-203ENST00000578619 PTPREP23469 700 aa6.95□□□□□ -1.3
GAREM1-203ENST00000578619 PRDM10Q9NQV6 1147 aa6.95□□□□□ -1.3
GAREM1-203ENST00000578619 STK32BQ9NY57 414 aa6.95□□□□□ -1.3
GAREM1-203ENST00000578619 CFDP1Q9UEE9 299 aaPredicted RBP6.95□□□□□ -1.3
GAREM1-203ENST00000578619 PXDNQ92626 1479 aa6.95□□□□□ -1.3
GAREM1-203ENST00000578619 NALCNQ8IZF0 1738 aa6.95□□□□□ -1.3
GAREM1-203ENST00000578619 ZNF644Q9H582 1327 aaPredicted RBP6.95□□□□□ -1.3
GAREM1-203ENST00000578619 ZFYVE9O95405 1425 aa6.94□□□□□ -1.3
GAREM1-203ENST00000578619 ADGRL2O95490 1459 aa6.94□□□□□ -1.3
GAREM1-203ENST00000578619 CABLES1Q8TDN4 633 aa6.94□□□□□ -1.3
GAREM1-203ENST00000578619 SLC4A5Q9BY07 1137 aa6.94□□□□□ -1.3
GAREM1-203ENST00000578619 NMRK2Q9NPI5 230 aa6.94□□□□□ -1.3
GAREM1-203ENST00000578619 TNRC18O15417 2968 aaPredicted RBP6.94□□□□□ -1.3
GAREM1-203ENST00000578619 PITPNM2Q9BZ72 1349 aa6.94□□□□□ -1.3
GAREM1-203ENST00000578619 RIMS2Q9UQ26 1411 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 LRRIQ1Q96JM4 1722 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 DPYSL4O14531 572 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 RBM46Q8TBY0 533 aaKnown RBP6.93□□□□□ -1.3
GAREM1-203ENST00000578619 ADAM33Q9BZ11 813 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 VPS9D1Q9Y2B5 631 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 PCDHGA10Q9Y5H3 936 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 NPHP3Q7Z494 1330 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 PIK3R4Q99570 1358 aa6.93□□□□□ -1.3
GAREM1-203ENST00000578619 PHF14O94880 888 aa6.92□□□□□ -1.3
GAREM1-203ENST00000578619 PRPF38BQ5VTL8 546 aaKnown RBP6.92□□□□□ -1.3
GAREM1-203ENST00000578619 SPATA31A5Q5VU36 1347 aa6.92□□□□□ -1.3
GAREM1-203ENST00000578619 SPATA31A7Q8IWB4 1347 aa6.92□□□□□ -1.3
GAREM1-203ENST00000578619 FYCO1Q9BQS8 1478 aa6.92□□□□□ -1.3
GAREM1-203ENST00000578619 MBD5Q9P267 1494 aa6.92□□□□□ -1.3
GAREM1-203ENST00000578619 FOXO3O43524 673 aa6.91□□□□□ -1.3
GAREM1-203ENST00000578619 SLC15A2Q16348 729 aa6.91□□□□□ -1.3
GAREM1-203ENST00000578619 C16orf71Q8IYS4 520 aaPredicted RBP6.91□□□□□ -1.3
GAREM1-203ENST00000578619 FBXW7Q969H0 707 aa6.91□□□□□ -1.3
GAREM1-203ENST00000578619 ZBED2Q9BTP6 218 aa6.91□□□□□ -1.3
GAREM1-203ENST00000578619 BTG4Q9NY30 223 aa6.91□□□□□ -1.3
GAREM1-203ENST00000578619 MTUS2Q5JR59 1369 aa6.91□□□□□ -1.3
GAREM1-203ENST00000578619 TULP4Q9NRJ4 1543 aa6.91□□□□□ -1.3
GAREM1-203ENST00000578619 XRN1Q8IZH2 1706 aaKnown RBP6.9□□□□□ -1.3
GAREM1-203ENST00000578619 ARHGEF28Q8N1W1 1705 aaKnown RBP6.9□□□□□ -1.3
GAREM1-203ENST00000578619 CTCFP49711 727 aaPredicted RBP6.9□□□□□ -1.3
GAREM1-203ENST00000578619 LBX1P52954 281 aa6.9□□□□□ -1.3
GAREM1-203ENST00000578619 FSTL1Q12841 308 aa6.9□□□□□ -1.3
GAREM1-203ENST00000578619 TYW1BQ6NUM6 668 aa6.9□□□□□ -1.3
GAREM1-203ENST00000578619 STAC3Q96MF2 364 aa6.9□□□□□ -1.3
GAREM1-203ENST00000578619 ARHGAP31Q2M1Z3 1444 aa6.9□□□□□ -1.31
GAREM1-203ENST00000578619 PDE3BQ13370 1112 aa6.89□□□□□ -1.31
GAREM1-203ENST00000578619 E2F4Q16254 413 aa6.89□□□□□ -1.31
GAREM1-203ENST00000578619 EPAS1Q99814 870 aa6.89□□□□□ -1.31
GAREM1-203ENST00000578619 HCSTQ9UBK5 93 aa6.89□□□□□ -1.31
GAREM1-203ENST00000578619 PRAG1Q86YV5 1406 aa6.88□□□□□ -1.31
GAREM1-203ENST00000578619 PPP1R3GB7ZBB8 358 aa6.88□□□□□ -1.31
GAREM1-203ENST00000578619 BHMG1C9JSJ3 638 aaPredicted RBP6.88□□□□□ -1.31
GAREM1-203ENST00000578619 POLD1P28340 1107 aa6.88□□□□□ -1.31
GAREM1-203ENST00000578619 PDIA6Q15084 440 aa6.88□□□□□ -1.31
GAREM1-203ENST00000578619 ESCO1Q5FWF5 840 aa6.88□□□□□ -1.31
GAREM1-203ENST00000578619 WDR70Q9NW82 654 aa6.88□□□□□ -1.31
GAREM1-203ENST00000578619 RGPD3A6NKT7 1758 aaPredicted RBP6.87□□□□□ -1.31
GAREM1-203ENST00000578619 RGPD4Q7Z3J3 1758 aa6.87□□□□□ -1.31
GAREM1-203ENST00000578619 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
GAREM1-203ENST00000578619 PLSCR1O15162 318 aa6.87□□□□□ -1.31
GAREM1-203ENST00000578619 PTF1AQ7RTS3 328 aa6.87□□□□□ -1.31
GAREM1-203ENST00000578619 AIDAQ96BJ3 306 aa6.87□□□□□ -1.31
GAREM1-203ENST00000578619 ARIH1Q9Y4X5 557 aaPredicted RBP6.87□□□□□ -1.31
GAREM1-203ENST00000578619 CCNB3Q8WWL7 1395 aa6.86□□□□□ -1.31
GAREM1-203ENST00000578619 MYO5BQ9ULV0 1848 aa6.86□□□□□ -1.31
GAREM1-203ENST00000578619 SPDYE16A6NNV3 312 aaPredicted RBP6.86□□□□□ -1.31
GAREM1-203ENST00000578619 MKRN1Q9UHC7 482 aaKnown RBP6.86□□□□□ -1.31
GAREM1-203ENST00000578619 CCDC141Q6ZP82 1450 aa6.85□□□□□ -1.31
GAREM1-203ENST00000578619 COL9A1P20849 921 aa6.85□□□□□ -1.31
GAREM1-203ENST00000578619 HDGFP51858 240 aaKnown RBP6.85□□□□□ -1.31
GAREM1-203ENST00000578619 DDX12PQ92771 950 aa6.85□□□□□ -1.31
GAREM1-203ENST00000578619 KCTD12Q96CX2 325 aaKnown RBP6.85□□□□□ -1.31
GAREM1-203ENST00000578619 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
GAREM1-203ENST00000578619 LMTK2Q8IWU2 1503 aa6.85□□□□□ -1.31
GAREM1-203ENST00000578619 TECPR2O15040 1411 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 ABCA3Q99758 1704 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 CUL9Q8IWT3 2517 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 TXNRD1Q16881 649 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 C6orf132Q5T0Z8 1188 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 LMOD2Q6P5Q4 547 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 MRPL50Q8N5N7 158 aaKnown RBP6.84□□□□□ -1.31
GAREM1-203ENST00000578619 SLC17A8Q8NDX2 589 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 PMFBP1Q8TBY8 1022 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 NBPF3Q9H094 633 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 RABGEF1Q9UJ41 708 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 CCDC18Q5T9S5 1454 aa6.84□□□□□ -1.31
GAREM1-203ENST00000578619 SPATA31A1Q5TZJ5 1347 aa6.83□□□□□ -1.32
GAREM1-203ENST00000578619 HABP4Q5JVS0 413 aaKnown RBP6.83□□□□□ -1.32
GAREM1-203ENST00000578619 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.83□□□□□ -1.32
GAREM1-203ENST00000578619 GCC2Q8IWJ2 1684 aa6.83□□□□□ -1.32
GAREM1-203ENST00000578619 TOPAZ1Q8N9V7 1692 aa6.83□□□□□ -1.32
GAREM1-203ENST00000578619 RRBP1Q9P2E9 1410 aaKnown RBP6.83□□□□□ -1.32
GAREM1-203ENST00000578619 EIF2AK4Q9P2K8 1649 aaKnown RBP6.83□□□□□ -1.32
GAREM1-203ENST00000578619 METP08581 1390 aa6.82□□□□□ -1.32
GAREM1-203ENST00000578619 HSPA8P11142 646 aaKnown RBP6.82□□□□□ -1.32
GAREM1-203ENST00000578619 NBR1Q14596 966 aa6.82□□□□□ -1.32
GAREM1-203ENST00000578619 PROX2Q3B8N5 592 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms