RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PARP4Q9UKK3 1724 aaKnown RBP16.13■□□□□ 0.17
IFT20-207ENST00000578547 DISP2A7MBM2 1401 aa16.12■□□□□ 0.17
IFT20-207ENST00000578547 TATP17735 454 aaPredicted RBP16.12■□□□□ 0.17
IFT20-207ENST00000578547 CDCA7Q9BWT1 371 aaPredicted RBP16.12■□□□□ 0.17
IFT20-207ENST00000578547 FCHSD2O94868 740 aa16.11■□□□□ 0.17
IFT20-207ENST00000578547 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
IFT20-207ENST00000578547 RGS12O14924 1447 aa16.11■□□□□ 0.17
IFT20-207ENST00000578547 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
IFT20-207ENST00000578547 SENP3-EIF4A1A0A087X0R7 540 aa16.09■□□□□ 0.17
IFT20-207ENST00000578547 EXOC5O00471 708 aa16.09■□□□□ 0.17
IFT20-207ENST00000578547 NEFMP07197 916 aa16.09■□□□□ 0.17
IFT20-207ENST00000578547 DDB1Q16531 1140 aa16.09■□□□□ 0.17
IFT20-207ENST00000578547 PNNQ9H307 717 aaKnown RBP16.09■□□□□ 0.17
IFT20-207ENST00000578547 LRRC37A3O60309 1634 aa16.08■□□□□ 0.17
IFT20-207ENST00000578547 THSD7AQ9UPZ6 1657 aa16.08■□□□□ 0.17
IFT20-207ENST00000578547 ZCRB1Q8TBF4 217 aaKnown RBP16.07■□□□□ 0.16
IFT20-207ENST00000578547 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
IFT20-207ENST00000578547 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
IFT20-207ENST00000578547 PLEKHF1Q96S99 279 aa16.07■□□□□ 0.16
IFT20-207ENST00000578547 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
IFT20-207ENST00000578547 TNS2Q63HR2 1409 aa16.06■□□□□ 0.16
IFT20-207ENST00000578547 PLEKHO1Q53GL0 409 aaPredicted RBP16.06■□□□□ 0.16
IFT20-207ENST00000578547 ILDR2Q71H61 639 aa16.06■□□□□ 0.16
IFT20-207ENST00000578547 KRT27Q7Z3Y8 459 aa16.06■□□□□ 0.16
IFT20-207ENST00000578547 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
IFT20-207ENST00000578547 PDE3BQ13370 1112 aa16.05■□□□□ 0.16
IFT20-207ENST00000578547 MARCH10Q8NA82 808 aaPredicted RBP16.05■□□□□ 0.16
IFT20-207ENST00000578547 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
IFT20-207ENST00000578547 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
IFT20-207ENST00000578547 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
IFT20-207ENST00000578547 FAM182BQ5T319 152 aa16.04■□□□□ 0.16
IFT20-207ENST00000578547 ZNF530Q6P9A1 599 aaPredicted RBP16.04■□□□□ 0.16
IFT20-207ENST00000578547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.16
IFT20-207ENST00000578547 RRP7AQ9Y3A4 280 aaKnown RBP16.04■□□□□ 0.16
IFT20-207ENST00000578547 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
IFT20-207ENST00000578547 APAF1O14727 1248 aa16.03■□□□□ 0.16
IFT20-207ENST00000578547 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
IFT20-207ENST00000578547 PLEKHG2Q9H7P9 1386 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 PCDH11XQ9BZA7 1347 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 PCDH11YQ9BZA8 1340 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 CYP27B1O15528 508 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 NFE2L2Q16236 605 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 BRWD3Q6RI45 1802 aa16.02■□□□□ 0.16
IFT20-207ENST00000578547 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
IFT20-207ENST00000578547 SALL2Q9Y467 1007 aaPredicted RBP16■□□□□ 0.15
IFT20-207ENST00000578547 MAP3K5Q99683 1374 aa16■□□□□ 0.15
IFT20-207ENST00000578547 PHKG2P15735 406 aa15.99■□□□□ 0.15
IFT20-207ENST00000578547 RIPK4P57078 832 aa15.99■□□□□ 0.15
IFT20-207ENST00000578547 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
IFT20-207ENST00000578547 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
IFT20-207ENST00000578547 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
IFT20-207ENST00000578547 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
IFT20-207ENST00000578547 GNAT3A8MTJ3 354 aa15.97■□□□□ 0.15
IFT20-207ENST00000578547 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
IFT20-207ENST00000578547 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
IFT20-207ENST00000578547 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
IFT20-207ENST00000578547 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
IFT20-207ENST00000578547 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
IFT20-207ENST00000578547 LMOD3Q0VAK6 560 aa15.95■□□□□ 0.14
IFT20-207ENST00000578547 DCTN1Q14203 1278 aa15.95■□□□□ 0.14
IFT20-207ENST00000578547 MCM10Q7L590 875 aa15.95■□□□□ 0.14
IFT20-207ENST00000578547 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
IFT20-207ENST00000578547 DOT1LQ8TEK3 1739 aa15.94■□□□□ 0.14
IFT20-207ENST00000578547 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
IFT20-207ENST00000578547 ACSBG1Q96GR2 724 aa15.94■□□□□ 0.14
IFT20-207ENST00000578547 THUMPD2Q9BTF0 503 aaKnown RBP15.94■□□□□ 0.14
IFT20-207ENST00000578547 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
IFT20-207ENST00000578547 BCL9O00512 1426 aa15.94■□□□□ 0.14
IFT20-207ENST00000578547 PTF1AQ7RTS3 328 aa15.93■□□□□ 0.14
IFT20-207ENST00000578547 DCAF5Q96JK2 942 aa15.93■□□□□ 0.14
IFT20-207ENST00000578547 LGR6Q9HBX8 967 aa15.93■□□□□ 0.14
IFT20-207ENST00000578547 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
IFT20-207ENST00000578547 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
IFT20-207ENST00000578547 KCNQ2O43526 872 aa15.92■□□□□ 0.14
IFT20-207ENST00000578547 SCN11AQ9UI33 1791 aa15.92■□□□□ 0.14
IFT20-207ENST00000578547 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
IFT20-207ENST00000578547 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
IFT20-207ENST00000578547 TRIM37O94972 964 aa15.91■□□□□ 0.14
IFT20-207ENST00000578547 PRIM1P49642 420 aaKnown RBP15.91■□□□□ 0.14
IFT20-207ENST00000578547 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
IFT20-207ENST00000578547 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
IFT20-207ENST00000578547 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
IFT20-207ENST00000578547 TEFQ10587 303 aa15.89■□□□□ 0.13
IFT20-207ENST00000578547 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
IFT20-207ENST00000578547 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
IFT20-207ENST00000578547 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
IFT20-207ENST00000578547 ERVV-2B6SEH9 535 aa15.88■□□□□ 0.13
IFT20-207ENST00000578547 CABP4P57796 275 aa15.88■□□□□ 0.13
IFT20-207ENST00000578547 CCDC27Q2M243 656 aa15.88■□□□□ 0.13
IFT20-207ENST00000578547 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
IFT20-207ENST00000578547 LAS1LQ9Y4W2 734 aaKnown RBP15.88■□□□□ 0.13
IFT20-207ENST00000578547 MRC1P22897 1456 aa15.88■□□□□ 0.13
IFT20-207ENST00000578547 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
IFT20-207ENST00000578547 PIGBQ92521 554 aa15.87■□□□□ 0.13
IFT20-207ENST00000578547 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
IFT20-207ENST00000578547 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
IFT20-207ENST00000578547 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
IFT20-207ENST00000578547 CALD1Q05682 793 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms