RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 DDB1Q16531 1140 aa29.65■■■□□ 2.34
PSMD11-206ENST00000578213 AEBP1Q8IUX7 1158 aa29.65■■■□□ 2.34
PSMD11-206ENST00000578213 MRS2Q9HD23 443 aa29.65■■■□□ 2.34
PSMD11-206ENST00000578213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.64■■■□□ 2.34
PSMD11-206ENST00000578213 CCER2I3L3R5 266 aa29.63■■■□□ 2.33
PSMD11-206ENST00000578213 FCHSD2O94868 740 aa29.63■■■□□ 2.33
PSMD11-206ENST00000578213 WDR43Q15061 677 aaKnown RBP eCLIP29.63■■■□□ 2.33
PSMD11-206ENST00000578213 EXOC5O00471 708 aa29.62■■■□□ 2.33
PSMD11-206ENST00000578213 HMOX1P09601 288 aa29.62■■■□□ 2.33
PSMD11-206ENST00000578213 PNNQ9H307 717 aaKnown RBP29.61■■■□□ 2.33
PSMD11-206ENST00000578213 RSPH6AQ9H0K4 717 aa29.6■■■□□ 2.33
PSMD11-206ENST00000578213 VIRMAQ69YN4 1812 aaKnown RBP29.59■■■□□ 2.33
PSMD11-206ENST00000578213 AMOTQ4VCS5 1084 aa29.59■■■□□ 2.33
PSMD11-206ENST00000578213 CCDC184Q52MB2 194 aa29.59■■■□□ 2.33
PSMD11-206ENST00000578213 ZCRB1Q8TBF4 217 aaKnown RBP29.59■■■□□ 2.33
PSMD11-206ENST00000578213 PDE3BQ13370 1112 aa29.58■■■□□ 2.33
PSMD11-206ENST00000578213 PCDH11XQ9BZA7 1347 aa29.58■■■□□ 2.33
PSMD11-206ENST00000578213 PCDH11YQ9BZA8 1340 aa29.58■■■□□ 2.33
PSMD11-206ENST00000578213 SPG7Q9UQ90 795 aa29.58■■■□□ 2.33
PSMD11-206ENST00000578213 KAT6BQ8WYB5 2073 aa29.56■■■□□ 2.32
PSMD11-206ENST00000578213 PLEKHO1Q53GL0 409 aaPredicted RBP29.56■■■□□ 2.32
PSMD11-206ENST00000578213 KRT27Q7Z3Y8 459 aa29.56■■■□□ 2.32
PSMD11-206ENST00000578213 SBF2Q86WG5 1849 aa29.56■■■□□ 2.32
PSMD11-206ENST00000578213 PRKAR2BP31323 418 aa29.55■■■□□ 2.32
PSMD11-206ENST00000578213 DLG5Q8TDM6 1919 aa29.54■■■□□ 2.32
PSMD11-206ENST00000578213 PNISRQ8TF01 805 aaKnown RBP29.54■■■□□ 2.32
PSMD11-206ENST00000578213 BCL9O00512 1426 aa29.54■■■□□ 2.32
PSMD11-206ENST00000578213 NEFMP07197 916 aa29.53■■■□□ 2.32
PSMD11-206ENST00000578213 MIER1Q8N108 512 aa29.53■■■□□ 2.32
PSMD11-206ENST00000578213 SCN11AQ9UI33 1791 aa29.5■■■□□ 2.31
PSMD11-206ENST00000578213 ADAMTS8Q9UP79 889 aa29.5■■■□□ 2.31
PSMD11-206ENST00000578213 EP400Q96L91 3159 aa29.5■■■□□ 2.31
PSMD11-206ENST00000578213 DOT1LQ8TEK3 1739 aa29.49■■■□□ 2.31
PSMD11-206ENST00000578213 GAS2L2Q8NHY3 880 aa29.49■■■□□ 2.31
PSMD11-206ENST00000578213 MAPK8IP3Q9UPT6 1336 aa29.48■■■□□ 2.31
PSMD11-206ENST00000578213 MARCH10Q8NA82 808 aaPredicted RBP29.48■■■□□ 2.31
PSMD11-206ENST00000578213 PLEKHF1Q96S99 279 aa29.48■■■□□ 2.31
PSMD11-206ENST00000578213 ADAMTS7Q9UKP4 1686 aa29.47■■■□□ 2.31
PSMD11-206ENST00000578213 IFNL2Q8IZJ0 200 aa29.47■■■□□ 2.31
PSMD11-206ENST00000578213 NHSQ6T4R5 1651 aa29.47■■■□□ 2.31
PSMD11-206ENST00000578213 CYP27B1O15528 508 aa29.46■■■□□ 2.31
PSMD11-206ENST00000578213 ZNF530Q6P9A1 599 aaPredicted RBP29.46■■■□□ 2.31
PSMD11-206ENST00000578213 DDX54Q8TDD1 881 aaKnown RBP29.46■■■□□ 2.31
PSMD11-206ENST00000578213 TOGARAM1Q9Y4F4 1720 aa29.45■■■□□ 2.31
PSMD11-206ENST00000578213 ITGB4P16144 1822 aa29.45■■■□□ 2.31
PSMD11-206ENST00000578213 HSP90AB1P08238 724 aaKnown RBP29.45■■■□□ 2.31
PSMD11-206ENST00000578213 C1orf141Q5JVX7 400 aa29.45■■■□□ 2.31
PSMD11-206ENST00000578213 FAM196AQ6ZSG2 479 aa29.45■■■□□ 2.31
PSMD11-206ENST00000578213 PHKG2P15735 406 aa29.44■■■□□ 2.3
PSMD11-206ENST00000578213 RUNDC1Q96C34 613 aa29.44■■■□□ 2.3
PSMD11-206ENST00000578213 NKX1-1Q15270 411 aaPredicted RBP29.43■■■□□ 2.3
PSMD11-206ENST00000578213 MTHFSDQ2M296 383 aaKnown RBP29.43■■■□□ 2.3
PSMD11-206ENST00000578213 AKAP4Q5JQC9 854 aa29.43■■■□□ 2.3
PSMD11-206ENST00000578213 PHACTR3Q96KR7 559 aa29.43■■■□□ 2.3
PSMD11-206ENST00000578213 MAP3K5Q99683 1374 aa29.4■■■□□ 2.3
PSMD11-206ENST00000578213 ILDR2Q71H61 639 aa29.39■■■□□ 2.3
PSMD11-206ENST00000578213 TNS1Q9HBL0 1735 aaKnown RBP29.38■■■□□ 2.29
PSMD11-206ENST00000578213 NFE2L2Q16236 605 aa29.37■■■□□ 2.29
PSMD11-206ENST00000578213 DCAF5Q96JK2 942 aa29.37■■■□□ 2.29
PSMD11-206ENST00000578213 CCDC146Q8IYE0 955 aa29.36■■■□□ 2.29
PSMD11-206ENST00000578213 FAM9BQ8IZU0 186 aa29.36■■■□□ 2.29
PSMD11-206ENST00000578213 BTAF1O14981 1849 aa29.36■■■□□ 2.29
PSMD11-206ENST00000578213 KDM6AO15550 1401 aaPredicted RBP29.36■■■□□ 2.29
PSMD11-206ENST00000578213 SIPA1L3O60292 1781 aaPredicted RBP29.35■■■□□ 2.29
PSMD11-206ENST00000578213 GNAT3A8MTJ3 354 aa29.35■■■□□ 2.29
PSMD11-206ENST00000578213 FAM182BQ5T319 152 aa29.35■■■□□ 2.29
PSMD11-206ENST00000578213 MRC1P22897 1456 aa29.35■■■□□ 2.29
PSMD11-206ENST00000578213 HTATSF1O43719 755 aaKnown RBP29.34■■■□□ 2.29
PSMD11-206ENST00000578213 RGPD3A6NKT7 1758 aaPredicted RBP29.32■■■□□ 2.28
PSMD11-206ENST00000578213 RGPD4Q7Z3J3 1758 aa29.32■■■□□ 2.28
PSMD11-206ENST00000578213 TMPOP42166 694 aaKnown RBP29.31■■■□□ 2.28
PSMD11-206ENST00000578213 ERVV-2B6SEH9 535 aa29.3■■■□□ 2.28
PSMD11-206ENST00000578213 LMOD3Q0VAK6 560 aa29.3■■■□□ 2.28
PSMD11-206ENST00000578213 RTF1Q92541 710 aaKnown RBP29.29■■■□□ 2.28
PSMD11-206ENST00000578213 CEMIPQ8WUJ3 1361 aa29.28■■■□□ 2.28
PSMD11-206ENST00000578213 NCBP3Q53F19 620 aaKnown RBP29.28■■■□□ 2.28
PSMD11-206ENST00000578213 MPRIPQ6WCQ1 1025 aa29.28■■■□□ 2.28
PSMD11-206ENST00000578213 RNMTO43148 476 aaKnown RBP29.27■■■□□ 2.28
PSMD11-206ENST00000578213 CCDC125Q86Z20 511 aa29.27■■■□□ 2.28
PSMD11-206ENST00000578213 BCL11BQ9C0K0 894 aaPredicted RBP29.27■■■□□ 2.28
PSMD11-206ENST00000578213 APAF1O14727 1248 aa29.26■■■□□ 2.27
PSMD11-206ENST00000578213 RIPK4P57078 832 aa29.26■■■□□ 2.27
PSMD11-206ENST00000578213 NGEFQ8N5V2 710 aa29.25■■■□□ 2.27
PSMD11-206ENST00000578213 ACSBG1Q96GR2 724 aa29.25■■■□□ 2.27
PSMD11-206ENST00000578213 PAPPAQ13219 1627 aa29.24■■■□□ 2.27
PSMD11-206ENST00000578213 TRIM37O94972 964 aa29.23■■■□□ 2.27
PSMD11-206ENST00000578213 PRIM1P49642 420 aaKnown RBP29.23■■■□□ 2.27
PSMD11-206ENST00000578213 TMOD3Q9NYL9 352 aa29.23■■■□□ 2.27
PSMD11-206ENST00000578213 IL17REQ8NFR9 667 aa29.22■■■□□ 2.27
PSMD11-206ENST00000578213 SYTL4Q96C24 671 aaPredicted RBP29.22■■■□□ 2.27
PSMD11-206ENST00000578213 LY75O60449 1722 aa29.22■■■□□ 2.27
PSMD11-206ENST00000578213 CABP4P57796 275 aa29.21■■■□□ 2.27
PSMD11-206ENST00000578213 SLC52A2Q9HAB3 445 aa29.21■■■□□ 2.27
PSMD11-206ENST00000578213 LGR6Q9HBX8 967 aa29.21■■■□□ 2.27
PSMD11-206ENST00000578213 KCNQ2O43526 872 aa29.2■■■□□ 2.26
PSMD11-206ENST00000578213 TEFQ10587 303 aa29.2■■■□□ 2.26
PSMD11-206ENST00000578213 RRP7AQ9Y3A4 280 aaKnown RBP29.2■■■□□ 2.26
PSMD11-206ENST00000578213 SF3B2Q13435 895 aaKnown RBP29.19■■■□□ 2.26
PSMD11-206ENST00000578213 CCDC27Q2M243 656 aa29.19■■■□□ 2.26
PSMD11-206ENST00000578213 UBR2Q8IWV8 1755 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms