RNA–Protein interactions for RNA: ENST00000578015.1

PSMD12-204, Transcript of proteasome 26S subunit, non-ATPase 12, humanhuman

TSL 2

Gene PSMD12, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD12-204ENST00000578015 GRIN3BO60391 1043 aa23.47■■□□□ 1.35
PSMD12-204ENST00000578015 COG3Q96JB2 828 aa23.47■■□□□ 1.35
PSMD12-204ENST00000578015 AMPHP49418 695 aa23.46■■□□□ 1.35
PSMD12-204ENST00000578015 ZCRB1Q8TBF4 217 aaKnown RBP23.46■■□□□ 1.35
PSMD12-204ENST00000578015 COL24A1Q17RW2 1714 aa23.45■■□□□ 1.34
PSMD12-204ENST00000578015 CCNL1Q9UK58 526 aaPredicted RBP23.44■■□□□ 1.34
PSMD12-204ENST00000578015 CGNL1Q0VF96 1302 aa23.43■■□□□ 1.34
PSMD12-204ENST00000578015 HOXC9P31274 260 aa23.43■■□□□ 1.34
PSMD12-204ENST00000578015 MAP3K19Q56UN5 1328 aa23.42■■□□□ 1.34
PSMD12-204ENST00000578015 USP47Q96K76 1375 aa23.41■■□□□ 1.34
PSMD12-204ENST00000578015 MSH5O43196 834 aa23.41■■□□□ 1.34
PSMD12-204ENST00000578015 LY75O60449 1722 aa23.4■■□□□ 1.34
PSMD12-204ENST00000578015 KCNQ4P56696 695 aa23.4■■□□□ 1.34
PSMD12-204ENST00000578015 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
PSMD12-204ENST00000578015 GOLGB1Q14789 3259 aaKnown RBP23.39■■□□□ 1.34
PSMD12-204ENST00000578015 RTL1A6NKG5 1358 aa23.39■■□□□ 1.33
PSMD12-204ENST00000578015 NSD2O96028 1365 aa23.39■■□□□ 1.33
PSMD12-204ENST00000578015 FLAD1Q8NFF5 587 aa23.38■■□□□ 1.33
PSMD12-204ENST00000578015 DOT1LQ8TEK3 1739 aa23.38■■□□□ 1.33
PSMD12-204ENST00000578015 RAPGEF4Q8WZA2 1011 aa23.37■■□□□ 1.33
PSMD12-204ENST00000578015 TUBGCP6Q96RT7 1819 aa23.36■■□□□ 1.33
PSMD12-204ENST00000578015 SMG6Q86US8 1419 aaKnown RBP23.36■■□□□ 1.33
PSMD12-204ENST00000578015 COL23A1Q86Y22 540 aaPredicted RBP23.36■■□□□ 1.33
PSMD12-204ENST00000578015 TONSLQ96HA7 1378 aa23.36■■□□□ 1.33
PSMD12-204ENST00000578015 MEGF6O75095 1541 aa23.34■■□□□ 1.33
PSMD12-204ENST00000578015 CD2APQ9Y5K6 639 aa23.34■■□□□ 1.33
PSMD12-204ENST00000578015 YBX3P16989 372 aaKnown RBP eCLIP23.32■■□□□ 1.32
PSMD12-204ENST00000578015 TATP17735 454 aaPredicted RBP23.32■■□□□ 1.32
PSMD12-204ENST00000578015 NBPF6Q5VWK0 638 aa23.32■■□□□ 1.32
PSMD12-204ENST00000578015 NBPF4Q96M43 638 aa23.32■■□□□ 1.32
PSMD12-204ENST00000578015 TESK2Q96S53 571 aa23.32■■□□□ 1.32
PSMD12-204ENST00000578015 PCDH11XQ9BZA7 1347 aa23.31■■□□□ 1.32
PSMD12-204ENST00000578015 PCDH11YQ9BZA8 1340 aa23.31■■□□□ 1.32
PSMD12-204ENST00000578015 SHANK3Q9BYB0 1731 aa23.3■■□□□ 1.32
PSMD12-204ENST00000578015 ST20-MTHFSA0A0A6YYL1 179 aa23.3■■□□□ 1.32
PSMD12-204ENST00000578015 FBLN1P23142 703 aa23.29■■□□□ 1.32
PSMD12-204ENST00000578015 RRS1Q15050 365 aaKnown RBP23.28■■□□□ 1.32
PSMD12-204ENST00000578015 MSL1Q68DK7 614 aa23.28■■□□□ 1.32
PSMD12-204ENST00000578015 SMARCC1Q92922 1105 aaPredicted RBP23.28■■□□□ 1.32
PSMD12-204ENST00000578015 KIF24Q5T7B8 1368 aa23.27■■□□□ 1.32
PSMD12-204ENST00000578015 RGPD2P0DJD1 1756 aa23.27■■□□□ 1.32
PSMD12-204ENST00000578015 CEP350Q5VT06 3117 aa23.26■■□□□ 1.31
PSMD12-204ENST00000578015 FYB1O15117 783 aa23.26■■□□□ 1.31
PSMD12-204ENST00000578015 IFFO2Q5TF58 517 aa23.26■■□□□ 1.31
PSMD12-204ENST00000578015 INSRP06213 1382 aa23.26■■□□□ 1.31
PSMD12-204ENST00000578015 PALLDQ8WX93 1383 aa23.26■■□□□ 1.31
PSMD12-204ENST00000578015 USHBP1Q8N6Y0 703 aa23.25■■□□□ 1.31
PSMD12-204ENST00000578015 GPBP1L1Q9HC44 474 aaPredicted RBP23.25■■□□□ 1.31
PSMD12-204ENST00000578015 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
PSMD12-204ENST00000578015 ATP10DQ9P241 1426 aa23.25■■□□□ 1.31
PSMD12-204ENST00000578015 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
PSMD12-204ENST00000578015 AK7Q96M32 723 aa23.24■■□□□ 1.31
PSMD12-204ENST00000578015 C5P01031 1676 aa23.24■■□□□ 1.31
PSMD12-204ENST00000578015 TMF1P82094 1093 aa23.23■■□□□ 1.31
PSMD12-204ENST00000578015 GGNBP2Q9H3C7 697 aa23.23■■□□□ 1.31
PSMD12-204ENST00000578015 FLT4P35916 1363 aa23.23■■□□□ 1.31
PSMD12-204ENST00000578015 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
PSMD12-204ENST00000578015 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
PSMD12-204ENST00000578015 TAF1LQ8IZX4 1826 aa23.18■■□□□ 1.3
PSMD12-204ENST00000578015 CYP27B1O15528 508 aa23.18■■□□□ 1.3
PSMD12-204ENST00000578015 SSFA2P28290 1259 aa23.17■■□□□ 1.3
PSMD12-204ENST00000578015 C4BP0C0L5 1744 aa23.16■■□□□ 1.3
PSMD12-204ENST00000578015 ADCY9O60503 1353 aa23.16■■□□□ 1.3
PSMD12-204ENST00000578015 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
PSMD12-204ENST00000578015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
PSMD12-204ENST00000578015 HSPA6P17066 643 aa23.15■■□□□ 1.3
PSMD12-204ENST00000578015 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
PSMD12-204ENST00000578015 IGSF1Q8N6C5 1336 aa23.14■■□□□ 1.3
PSMD12-204ENST00000578015 PIGBQ92521 554 aa23.14■■□□□ 1.29
PSMD12-204ENST00000578015 PHF14O94880 888 aa23.13■■□□□ 1.29
PSMD12-204ENST00000578015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.293e-9■■□□□ 11.5
PSMD12-204ENST00000578015 LOC102724428A0A0B4J2F2 783 aa23.12■■□□□ 1.29
PSMD12-204ENST00000578015 SIK1P57059 783 aa23.12■■□□□ 1.29
PSMD12-204ENST00000578015 ZNF526Q8TF50 670 aaPredicted RBP23.11■■□□□ 1.29
PSMD12-204ENST00000578015 ITGB4P16144 1822 aa23.1■■□□□ 1.29
PSMD12-204ENST00000578015 TMOD3Q9NYL9 352 aa23.1■■□□□ 1.29
PSMD12-204ENST00000578015 KIF20BQ96Q89 1820 aa23.1■■□□□ 1.29
PSMD12-204ENST00000578015 UBR3Q6ZT12 1888 aa23.09■■□□□ 1.29
PSMD12-204ENST00000578015 PKD1L3Q7Z443 1732 aa23.09■■□□□ 1.29
PSMD12-204ENST00000578015 NCAPD2Q15021 1401 aa23.08■■□□□ 1.29
PSMD12-204ENST00000578015 PPM1GO15355 546 aaPredicted RBP23.07■■□□□ 1.28
PSMD12-204ENST00000578015 AMIGO3Q86WK7 504 aa23.07■■□□□ 1.28
PSMD12-204ENST00000578015 EMILIN1Q9Y6C2 1016 aa23.07■■□□□ 1.28
PSMD12-204ENST00000578015 TOGARAM1Q9Y4F4 1720 aa23.07■■□□□ 1.28
PSMD12-204ENST00000578015 GNPATO15228 680 aa23.06■■□□□ 1.28
PSMD12-204ENST00000578015 IFNL2Q8IZJ0 200 aa23.06■■□□□ 1.28
PSMD12-204ENST00000578015 LINC00116Q8NCU8 138 aa23.06■■□□□ 1.28
PSMD12-204ENST00000578015 WASHC2AQ641Q2 1341 aa23.06■■□□□ 1.28
PSMD12-204ENST00000578015 ATP6V1AP38606 617 aa23.05■■□□□ 1.28
PSMD12-204ENST00000578015 PLEKHG2Q9H7P9 1386 aa23.03■■□□□ 1.28
PSMD12-204ENST00000578015 TGFB2P61812 414 aa23.03■■□□□ 1.28
PSMD12-204ENST00000578015 NLGN1Q8N2Q7 840 aa23.03■■□□□ 1.28
PSMD12-204ENST00000578015 CARD14Q9BXL6 1004 aa23.03■■□□□ 1.28
PSMD12-204ENST00000578015 MAP2P11137 1827 aaKnown RBP23.03■■□□□ 1.28
PSMD12-204ENST00000578015 MMP10P09238 476 aa23.02■■□□□ 1.28
PSMD12-204ENST00000578015 EYA1Q99502 592 aa23.02■■□□□ 1.28
PSMD12-204ENST00000578015 WWC3Q9ULE0 1092 aa23.02■■□□□ 1.28
PSMD12-204ENST00000578015 ASAP1Q9ULH1 1129 aa23.02■■□□□ 1.28
PSMD12-204ENST00000578015 PHKG2P15735 406 aa23.01■■□□□ 1.27
PSMD12-204ENST00000578015 SMIM5Q71RC9 77 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms