RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 GPRASP1Q5JY77 1395 aa10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 PPLO60437 1756 aa10.11□□□□□ -0.79
SMARCE1-212ENST00000577721 HRCP23327 699 aa10.1□□□□□ -0.79
SMARCE1-212ENST00000577721 MINK1Q8N4C8 1332 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-212ENST00000577721 FOXK1P85037 733 aa10.09□□□□□ -0.79
SMARCE1-212ENST00000577721 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-212ENST00000577721 PRDM11Q9NQV5 511 aa10.09□□□□□ -0.79
SMARCE1-212ENST00000577721 USP32Q8NFA0 1604 aa10.08□□□□□ -0.8
SMARCE1-212ENST00000577721 ZNF454Q8N9F8 522 aa10.08□□□□□ -0.8
SMARCE1-212ENST00000577721 NBPF3Q9H094 633 aa10.08□□□□□ -0.8
SMARCE1-212ENST00000577721 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
SMARCE1-212ENST00000577721 NRXN1Q9ULB1 1477 aa10.08□□□□□ -0.8
SMARCE1-212ENST00000577721 KIF1AQ12756 1690 aa10.08□□□□□ -0.8
SMARCE1-212ENST00000577721 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 PTPREP23469 700 aa10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 EVA1CP58658 441 aa10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 STRN4Q9NRL3 753 aa10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 FMN2Q9NZ56 1722 aa10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
SMARCE1-212ENST00000577721 WASLO00401 505 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-212ENST00000577721 TRIM37O94972 964 aa10.06□□□□□ -0.8
SMARCE1-212ENST00000577721 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
SMARCE1-212ENST00000577721 CHRNA2Q15822 529 aa10.06□□□□□ -0.8
SMARCE1-212ENST00000577721 EZH2Q15910 746 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-212ENST00000577721 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-212ENST00000577721 ANKARQ7Z5J8 1434 aa10.06□□□□□ -0.8
SMARCE1-212ENST00000577721 EIF3AQ14152 1382 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 APBA3O96018 575 aa10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 ZC3H6P61129 1189 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 NUTM2GQ5VZR2 741 aa10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 TRAF7Q6Q0C0 670 aa10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 FAM196AQ6ZSG2 479 aa10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
SMARCE1-212ENST00000577721 PRR36Q9H6K5 1346 aa10.04□□□□□ -0.8
SMARCE1-212ENST00000577721 KNDC1Q76NI1 1749 aa10.03□□□□□ -0.8
SMARCE1-212ENST00000577721 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-212ENST00000577721 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
SMARCE1-212ENST00000577721 SRCAPQ6ZRS2 3230 aa10.03□□□□□ -0.8
SMARCE1-212ENST00000577721 NBPF8Q3BBV2 869 aa10.02□□□□□ -0.81
SMARCE1-212ENST00000577721 NBPF14Q5TI25 921 aa10.02□□□□□ -0.81
SMARCE1-212ENST00000577721 CAMKK2Q96RR4 588 aa10.02□□□□□ -0.81
SMARCE1-212ENST00000577721 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-212ENST00000577721 BRWD3Q6RI45 1802 aa10.02□□□□□ -0.81
SMARCE1-212ENST00000577721 SPATA31A1Q5TZJ5 1347 aa10.02□□□□□ -0.81
SMARCE1-212ENST00000577721 KIAA0232Q92628 1395 aa10.01□□□□□ -0.81
SMARCE1-212ENST00000577721 CDK19Q9BWU1 502 aa10.01□□□□□ -0.81
SMARCE1-212ENST00000577721 NWD2Q9ULI1 1742 aa10.01□□□□□ -0.81
SMARCE1-212ENST00000577721 PLCH1Q4KWH8 1693 aa10□□□□□ -0.81
SMARCE1-212ENST00000577721 GFRA3O60609 400 aa10□□□□□ -0.81
SMARCE1-212ENST00000577721 PPP1R37O75864 691 aa10□□□□□ -0.81
SMARCE1-212ENST00000577721 ABTB2Q8N961 1025 aa10□□□□□ -0.81
SMARCE1-212ENST00000577721 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
SMARCE1-212ENST00000577721 PPP1R1BQ9UD71 204 aaPredicted RBP10□□□□□ -0.81
SMARCE1-212ENST00000577721 DLC1Q96QB1 1528 aa10□□□□□ -0.81
SMARCE1-212ENST00000577721 IFT172Q9UG01 1749 aa9.99□□□□□ -0.81
SMARCE1-212ENST00000577721 EP400Q96L91 3159 aa9.99□□□□□ -0.81
SMARCE1-212ENST00000577721 ZBTB7CA1YPR0 619 aa9.99□□□□□ -0.81
SMARCE1-212ENST00000577721 DSG2Q14126 1118 aa9.99□□□□□ -0.81
SMARCE1-212ENST00000577721 RGPD8O14715 1765 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 LRP5O75197 1615 aa9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 YY1P25490 414 aa9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 KCNC4Q03721 635 aa9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 LARP1Q6PKG0 1096 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 TCP11L2Q8N4U5 519 aa9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 ACEP12821 1306 aa9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-212ENST00000577721 TULP4Q9NRJ4 1543 aa9.97□□□□□ -0.81
SMARCE1-212ENST00000577721 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
SMARCE1-212ENST00000577721 RAB3GAP2Q9H2M9 1393 aa9.97□□□□□ -0.81
SMARCE1-212ENST00000577721 DISP2A7MBM2 1401 aa9.97□□□□□ -0.81
SMARCE1-212ENST00000577721 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-212ENST00000577721 NLRP13Q86W25 1043 aa9.96□□□□□ -0.82
SMARCE1-212ENST00000577721 SPON1Q9HCB6 807 aa9.96□□□□□ -0.82
SMARCE1-212ENST00000577721 PARD3Q8TEW0 1356 aa9.96□□□□□ -0.82
SMARCE1-212ENST00000577721 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
SMARCE1-212ENST00000577721 GCP02774 474 aa9.95□□□□□ -0.82
SMARCE1-212ENST00000577721 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-212ENST00000577721 ADGRB1O14514 1584 aa9.95□□□□□ -0.82
SMARCE1-212ENST00000577721 NRAPQ86VF7 1730 aa9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 ABCA3Q99758 1704 aa9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 TRPM3Q9HCF6 1732 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 ADGRB2O60241 1585 aa9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 KCNQ2O43526 872 aa9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 FOSBP53539 338 aa9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 OXER1Q8TDS5 423 aa9.94□□□□□ -0.82
SMARCE1-212ENST00000577721 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-212ENST00000577721 LCE2BO14633 110 aa9.93□□□□□ -0.82
SMARCE1-212ENST00000577721 RGPD1P0DJD0 1748 aa9.93□□□□□ -0.82
SMARCE1-212ENST00000577721 ALS2Q96Q42 1657 aa9.93□□□□□ -0.82
SMARCE1-212ENST00000577721 POLR3AO14802 1390 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-212ENST00000577721 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
SMARCE1-212ENST00000577721 ATP7BP35670 1465 aa9.91□□□□□ -0.82
SMARCE1-212ENST00000577721 THSD7AQ9UPZ6 1657 aa9.91□□□□□ -0.82
SMARCE1-212ENST00000577721 DDB1Q16531 1140 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms