RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 ERVK-9P63128 1117 aa6.28□□□□□ -1.4
CDH8-204ENST00000577536 FOXD4L5Q5VV16 416 aaPredicted RBP6.28□□□□□ -1.4
CDH8-204ENST00000577536 GPAT2Q6NUI2 795 aa6.28□□□□□ -1.4
CDH8-204ENST00000577536 CCDC155Q8N6L0 562 aa6.28□□□□□ -1.4
CDH8-204ENST00000577536 TBC1D2BQ9UPU7 963 aa6.28□□□□□ -1.4
CDH8-204ENST00000577536 ATP5J2-PTCD1G3V325 749 aa6.27□□□□□ -1.41
CDH8-204ENST00000577536 CC2D2BQ6DHV5 1058 aa6.27□□□□□ -1.41
CDH8-204ENST00000577536 PRM3Q9NNZ6 103 aa6.27□□□□□ -1.41
CDH8-204ENST00000577536 NANOS1Q8WY41 292 aaKnown RBP6.26□□□□□ -1.41
CDH8-204ENST00000577536 PCDHB11Q9Y5F2 797 aa6.26□□□□□ -1.41
CDH8-204ENST00000577536 SENP3-EIF4A1A0A087X0R7 540 aa6.25□□□□□ -1.41
CDH8-204ENST00000577536 ITGA6P23229 1130 aa6.25□□□□□ -1.41
CDH8-204ENST00000577536 SCTRP47872 440 aa6.25□□□□□ -1.41
CDH8-204ENST00000577536 RNF144AP50876 292 aaPredicted RBP6.25□□□□□ -1.41
CDH8-204ENST00000577536 LYSMD3Q7Z3D4 306 aa6.25□□□□□ -1.41
CDH8-204ENST00000577536 GPR161Q8N6U8 529 aaKnown RBP6.25□□□□□ -1.41
CDH8-204ENST00000577536 A0A1W2PRU2 124 aa6.24□□□□□ -1.41
CDH8-204ENST00000577536 MEN1O00255 615 aa6.24□□□□□ -1.41
CDH8-204ENST00000577536 IRF5Q13568 498 aa6.24□□□□□ -1.41
CDH8-204ENST00000577536 CYP2U1Q7Z449 544 aa6.24□□□□□ -1.41
CDH8-204ENST00000577536 CEP126Q9P2H0 1117 aa6.24□□□□□ -1.41
CDH8-204ENST00000577536 TRAK2O60296 914 aa6.23□□□□□ -1.41
CDH8-204ENST00000577536 GPC1P35052 558 aa6.23□□□□□ -1.41
CDH8-204ENST00000577536 EIF4G2P78344 907 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDH8-204ENST00000577536 KRT76Q01546 638 aa6.23□□□□□ -1.41
CDH8-204ENST00000577536 PRICKLE2Q7Z3G6 844 aa6.23□□□□□ -1.41
CDH8-204ENST00000577536 OSBPL3Q9H4L5 887 aa6.23□□□□□ -1.41
CDH8-204ENST00000577536 RNF225M0QZC1 329 aaPredicted RBP6.22□□□□□ -1.41
CDH8-204ENST00000577536 SV2AQ7L0J3 742 aa6.22□□□□□ -1.41
CDH8-204ENST00000577536 VWA5B2Q8N398 1253 aa6.22□□□□□ -1.41
CDH8-204ENST00000577536 CCDC85AQ96PX6 553 aaPredicted RBP6.22□□□□□ -1.41
CDH8-204ENST00000577536 ESF1Q9H501 851 aaKnown RBP6.22□□□□□ -1.41
CDH8-204ENST00000577536 GDPD2Q9HCC8 539 aa6.22□□□□□ -1.41
CDH8-204ENST00000577536 CDC14CA4D256 554 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 RHOQP17081 205 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 CLN3Q13286 438 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 CNTNAP3BQ96NU0 1288 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 NLRP3Q96P20 1036 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 CDCA7Q9BWT1 371 aaPredicted RBP6.21□□□□□ -1.42
CDH8-204ENST00000577536 COL25A1Q9BXS0 654 aaPredicted RBP6.21□□□□□ -1.42
CDH8-204ENST00000577536 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 CNTNAP3Q9BZ76 1288 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 ARHGEF10LQ9HCE6 1279 aa6.21□□□□□ -1.42
CDH8-204ENST00000577536 MYCP01106 439 aaPredicted RBP6.2□□□□□ -1.42
CDH8-204ENST00000577536 ABL2P42684 1182 aa6.2□□□□□ -1.42
CDH8-204ENST00000577536 VAC14Q08AM6 782 aa6.2□□□□□ -1.42
CDH8-204ENST00000577536 MCM6Q14566 821 aa6.2□□□□□ -1.42
CDH8-204ENST00000577536 SLC27A3Q5K4L6 730 aa6.2□□□□□ -1.42
CDH8-204ENST00000577536 PHTF2Q8N3S3 785 aa6.2□□□□□ -1.42
CDH8-204ENST00000577536 GNRH1P01148 92 aa6.19□□□□□ -1.42
CDH8-204ENST00000577536 RNFT1Q5M7Z0 435 aa6.19□□□□□ -1.42
CDH8-204ENST00000577536 GRIP2Q9C0E4 1043 aa6.19□□□□□ -1.42
CDH8-204ENST00000577536 ADAMTS8Q9UP79 889 aa6.19□□□□□ -1.42
CDH8-204ENST00000577536 POU4F2Q12837 409 aa6.18□□□□□ -1.42
CDH8-204ENST00000577536 WASHC4Q2M389 1173 aa6.18□□□□□ -1.42
CDH8-204ENST00000577536 TSGA10IPQ3SY00 556 aa6.18□□□□□ -1.42
CDH8-204ENST00000577536 SLFNL1Q499Z3 407 aa6.18□□□□□ -1.42
CDH8-204ENST00000577536 RAB6BQ9NRW1 208 aa6.18□□□□□ -1.42
CDH8-204ENST00000577536 CUEDC1Q9NWM3 386 aaPredicted RBP6.18□□□□□ -1.42
CDH8-204ENST00000577536 DOLKQ9UPQ8 538 aa6.18□□□□□ -1.42
CDH8-204ENST00000577536 SPATA31C2B4DYI2 1134 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 IL2RAP01589 272 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 IRS1P35568 1242 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 NBPF10Q6P3W6 841 aaKnown RBP6.17□□□□□ -1.42
CDH8-204ENST00000577536 RNF135Q8IUD6 432 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 NBPF15Q8N660 670 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 ESYT1Q9BSJ8 1104 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 CHIC2Q9UKJ5 165 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 DYRK1BQ9Y463 629 aa6.17□□□□□ -1.42
CDH8-204ENST00000577536 SLURP2P0DP57 97 aa6.16□□□□□ -1.42
CDH8-204ENST00000577536 USP4Q13107 963 aa6.16□□□□□ -1.42
CDH8-204ENST00000577536 WDR44Q5JSH3 913 aa6.16□□□□□ -1.42
CDH8-204ENST00000577536 TRIM22Q8IYM9 498 aa6.16□□□□□ -1.42
CDH8-204ENST00000577536 CNKSR1Q969H4 720 aa6.16□□□□□ -1.42
CDH8-204ENST00000577536 ZNF837Q96EG3 531 aaPredicted RBP6.16□□□□□ -1.42
CDH8-204ENST00000577536 GMCL1Q96IK5 515 aa6.16□□□□□ -1.42
CDH8-204ENST00000577536 DNMT3AQ9Y6K1 912 aaPredicted RBP6.16□□□□□ -1.42
CDH8-204ENST00000577536 WASLO00401 505 aaPredicted RBP6.15□□□□□ -1.42
CDH8-204ENST00000577536 SOX11P35716 441 aa6.15□□□□□ -1.42
CDH8-204ENST00000577536 CENPCQ03188 943 aa6.15□□□□□ -1.42
CDH8-204ENST00000577536 RIPOR1Q6ZS17 1223 aa6.15□□□□□ -1.42
CDH8-204ENST00000577536 TAS1R3Q7RTX0 852 aa6.15□□□□□ -1.42
CDH8-204ENST00000577536 XAGE2Q96GT9 111 aa6.15□□□□□ -1.42
CDH8-204ENST00000577536 GAS2L1Q99501 681 aaPredicted RBP6.15□□□□□ -1.42
CDH8-204ENST00000577536 COG6Q9Y2V7 657 aa6.15□□□□□ -1.42
CDH8-204ENST00000577536 HRH3Q9Y5N1 445 aa6.15□□□□□ -1.42
CDH8-204ENST00000577536 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
CDH8-204ENST00000577536 SEMA3FQ13275 785 aa6.14□□□□□ -1.43
CDH8-204ENST00000577536 GAS6Q14393 721 aa6.14□□□□□ -1.43
CDH8-204ENST00000577536 DBN1Q16643 649 aa6.14□□□□□ -1.43
CDH8-204ENST00000577536 OXLD1Q5BKU9 147 aa6.14□□□□□ -1.43
CDH8-204ENST00000577536 SIRT1Q96EB6 747 aa6.14□□□□□ -1.43
CDH8-204ENST00000577536 ZSCAN10Q96SZ4 725 aaPredicted RBP6.14□□□□□ -1.43
CDH8-204ENST00000577536 H7C1W4 665 aa6.13□□□□□ -1.43
CDH8-204ENST00000577536 IGHA1P01876 353 aa6.13□□□□□ -1.43
CDH8-204ENST00000577536 MAP7D1Q3KQU3 841 aa6.13□□□□□ -1.43
CDH8-204ENST00000577536 ESCO1Q5FWF5 840 aa6.13□□□□□ -1.43
CDH8-204ENST00000577536 ZNF385CQ66K41 422 aaPredicted RBP6.13□□□□□ -1.43
CDH8-204ENST00000577536 FOXR1Q6PIV2 292 aa6.13□□□□□ -1.43
CDH8-204ENST00000577536 SVOPQ8N4V2 548 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms