RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 ZCRB1Q8TBF4 217 aaKnown RBP26.87■■□□□ 1.89
SUPT4H1-202ENST00000577396 U2SURPO15042 1029 aaKnown RBP26.84■■□□□ 1.89
SUPT4H1-202ENST00000577396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.83■■□□□ 1.897e-8■■□□□ 12.6
SUPT4H1-202ENST00000577396 NUDCQ9Y266 331 aa26.83■■□□□ 1.89
SUPT4H1-202ENST00000577396 SOCS7O14512 581 aa26.83■■□□□ 1.88
SUPT4H1-202ENST00000577396 ANP32CO43423 234 aa26.83■■□□□ 1.88
SUPT4H1-202ENST00000577396 HMOX1P09601 288 aa26.83■■□□□ 1.88
SUPT4H1-202ENST00000577396 FAM196AQ6ZSG2 479 aa26.83■■□□□ 1.88
SUPT4H1-202ENST00000577396 PLEKHG2Q9H7P9 1386 aa26.82■■□□□ 1.88
SUPT4H1-202ENST00000577396 DDX54Q8TDD1 881 aaKnown RBP26.81■■□□□ 1.88
SUPT4H1-202ENST00000577396 UPF1Q92900 1129 aaKnown RBP eCLIP26.81■■□□□ 1.882e-8■■■■■ 27.8
SUPT4H1-202ENST00000577396 BCL9O00512 1426 aa26.8■■□□□ 1.88
SUPT4H1-202ENST00000577396 CYP27B1O15528 508 aa26.79■■□□□ 1.88
SUPT4H1-202ENST00000577396 SHANK3Q9BYB0 1731 aa26.78■■□□□ 1.88
SUPT4H1-202ENST00000577396 SPG7Q9UQ90 795 aa26.78■■□□□ 1.88
SUPT4H1-202ENST00000577396 U2AF1L5P0DN76 240 aaPredicted RBP26.77■■□□□ 1.88
SUPT4H1-202ENST00000577396 U2AF1Q01081 240 aaKnown RBP eCLIP26.77■■□□□ 1.882e-7■□□□□ 9.5
SUPT4H1-202ENST00000577396 PKD1L3Q7Z443 1732 aa26.76■■□□□ 1.87
SUPT4H1-202ENST00000577396 PCDH11XQ9BZA7 1347 aa26.76■■□□□ 1.87
SUPT4H1-202ENST00000577396 PCDH11YQ9BZA8 1340 aa26.76■■□□□ 1.87
SUPT4H1-202ENST00000577396 AMOTQ4VCS5 1084 aa26.76■■□□□ 1.87
SUPT4H1-202ENST00000577396 RSPH6AQ9H0K4 717 aa26.76■■□□□ 1.87
SUPT4H1-202ENST00000577396 FCHSD2O94868 740 aa26.75■■□□□ 1.87
SUPT4H1-202ENST00000577396 PLEKHO1Q53GL0 409 aaPredicted RBP26.75■■□□□ 1.87
SUPT4H1-202ENST00000577396 CCDC184Q52MB2 194 aa26.74■■□□□ 1.87
SUPT4H1-202ENST00000577396 NKX1-1Q15270 411 aaPredicted RBP26.72■■□□□ 1.87
SUPT4H1-202ENST00000577396 CCDC125Q86Z20 511 aa26.72■■□□□ 1.87
SUPT4H1-202ENST00000577396 TRIM37O94972 964 aa26.72■■□□□ 1.87
SUPT4H1-202ENST00000577396 PHKG2P15735 406 aa26.71■■□□□ 1.87
SUPT4H1-202ENST00000577396 IFNL2Q8IZJ0 200 aa26.71■■□□□ 1.87
SUPT4H1-202ENST00000577396 PRKAR2BP31323 418 aa26.7■■□□□ 1.86
SUPT4H1-202ENST00000577396 PTF1AQ7RTS3 328 aa26.69■■□□□ 1.86
SUPT4H1-202ENST00000577396 PHACTR3Q96KR7 559 aa26.69■■□□□ 1.86
SUPT4H1-202ENST00000577396 MTHFSDQ2M296 383 aaKnown RBP26.68■■□□□ 1.86
SUPT4H1-202ENST00000577396 SBF2Q86WG5 1849 aa26.68■■□□□ 1.86
SUPT4H1-202ENST00000577396 KCNQ2O43526 872 aa26.68■■□□□ 1.86
SUPT4H1-202ENST00000577396 ZNF530Q6P9A1 599 aaPredicted RBP26.67■■□□□ 1.86
SUPT4H1-202ENST00000577396 PLEKHF1Q96S99 279 aa26.67■■□□□ 1.86
SUPT4H1-202ENST00000577396 BCL11BQ9C0K0 894 aaPredicted RBP26.67■■□□□ 1.86
SUPT4H1-202ENST00000577396 ACSBG1Q96GR2 724 aa26.66■■□□□ 1.86
SUPT4H1-202ENST00000577396 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
SUPT4H1-202ENST00000577396 ADAMTS8Q9UP79 889 aa26.64■■□□□ 1.85
SUPT4H1-202ENST00000577396 PRIM1P49642 420 aaKnown RBP26.63■■□□□ 1.85
SUPT4H1-202ENST00000577396 AKAP4Q5JQC9 854 aa26.62■■□□□ 1.85
SUPT4H1-202ENST00000577396 KAT6BQ8WYB5 2073 aa26.62■■□□□ 1.85
SUPT4H1-202ENST00000577396 C1orf141Q5JVX7 400 aa26.61■■□□□ 1.85
SUPT4H1-202ENST00000577396 WDR43Q15061 677 aaKnown RBP eCLIP26.61■■□□□ 1.85
SUPT4H1-202ENST00000577396 PNISRQ8TF01 805 aaKnown RBP26.61■■□□□ 1.85
SUPT4H1-202ENST00000577396 DCAF5Q96JK2 942 aa26.61■■□□□ 1.85
SUPT4H1-202ENST00000577396 HSP90AB1P08238 724 aaKnown RBP26.6■■□□□ 1.85
SUPT4H1-202ENST00000577396 SF3B2Q13435 895 aaKnown RBP26.6■■□□□ 1.85
SUPT4H1-202ENST00000577396 GAS2L2Q8NHY3 880 aa26.6■■□□□ 1.85
SUPT4H1-202ENST00000577396 PNNQ9H307 717 aaKnown RBP26.6■■□□□ 1.85
SUPT4H1-202ENST00000577396 MRS2Q9HD23 443 aa26.6■■□□□ 1.85
SUPT4H1-202ENST00000577396 APBA3O96018 575 aa26.59■■□□□ 1.85
SUPT4H1-202ENST00000577396 DEFB132Q7Z7B7 95 aa26.59■■□□□ 1.85
SUPT4H1-202ENST00000577396 TNS1Q9HBL0 1735 aaKnown RBP26.59■■□□□ 1.85
SUPT4H1-202ENST00000577396 MPRIPQ6WCQ1 1025 aa26.58■■□□□ 1.85
SUPT4H1-202ENST00000577396 NHSQ6T4R5 1651 aa26.58■■□□□ 1.85
SUPT4H1-202ENST00000577396 KDM6AO15550 1401 aaPredicted RBP26.57■■□□□ 1.84
SUPT4H1-202ENST00000577396 SYTL4Q96C24 671 aaPredicted RBP26.57■■□□□ 1.84
SUPT4H1-202ENST00000577396 DOT1LQ8TEK3 1739 aa26.56■■□□□ 1.84
SUPT4H1-202ENST00000577396 LGR6Q9HBX8 967 aa26.56■■□□□ 1.84
SUPT4H1-202ENST00000577396 TOGARAM1Q9Y4F4 1720 aa26.56■■□□□ 1.84
SUPT4H1-202ENST00000577396 ERVV-2B6SEH9 535 aa26.55■■□□□ 1.84
SUPT4H1-202ENST00000577396 PLSCR1O15162 318 aa26.55■■□□□ 1.84
SUPT4H1-202ENST00000577396 BAG6P46379 1132 aa26.54■■□□□ 1.84
SUPT4H1-202ENST00000577396 EN1Q05925 392 aaPredicted RBP26.54■■□□□ 1.84
SUPT4H1-202ENST00000577396 CAMKK2Q96RR4 588 aa26.54■■□□□ 1.84
SUPT4H1-202ENST00000577396 GNAT3A8MTJ3 354 aa26.54■■□□□ 1.84
SUPT4H1-202ENST00000577396 PIGBQ92521 554 aa26.54■■□□□ 1.84
SUPT4H1-202ENST00000577396 IL17REQ8NFR9 667 aa26.53■■□□□ 1.84
SUPT4H1-202ENST00000577396 RNMTO43148 476 aaKnown RBP26.52■■□□□ 1.84
SUPT4H1-202ENST00000577396 MAP3K5Q99683 1374 aa26.52■■□□□ 1.84
SUPT4H1-202ENST00000577396 NEFMP07197 916 aa26.51■■□□□ 1.83
SUPT4H1-202ENST00000577396 CCDC146Q8IYE0 955 aa26.51■■□□□ 1.83
SUPT4H1-202ENST00000577396 RUNDC1Q96C34 613 aa26.51■■□□□ 1.83
SUPT4H1-202ENST00000577396 ITGB4P16144 1822 aa26.5■■□□□ 1.83
SUPT4H1-202ENST00000577396 BTAF1O14981 1849 aa26.5■■□□□ 1.83
SUPT4H1-202ENST00000577396 EZH2Q15910 746 aaKnown RBP26.5■■□□□ 1.83
SUPT4H1-202ENST00000577396 NFE2L2Q16236 605 aa26.5■■□□□ 1.83
SUPT4H1-202ENST00000577396 MAPK8IP3Q9UPT6 1336 aa26.49■■□□□ 1.83
SUPT4H1-202ENST00000577396 MIER1Q8N108 512 aa26.49■■□□□ 1.83
SUPT4H1-202ENST00000577396 PROM2Q8N271 834 aa26.49■■□□□ 1.83
SUPT4H1-202ENST00000577396 TMOD3Q9NYL9 352 aa26.49■■□□□ 1.83
SUPT4H1-202ENST00000577396 ADAMTS7Q9UKP4 1686 aa26.49■■□□□ 1.83
SUPT4H1-202ENST00000577396 CCER2I3L3R5 266 aa26.48■■□□□ 1.83
SUPT4H1-202ENST00000577396 HTATSF1O43719 755 aaKnown RBP26.48■■□□□ 1.83
SUPT4H1-202ENST00000577396 NFATC2IPQ8NCF5 419 aa26.48■■□□□ 1.83
SUPT4H1-202ENST00000577396 SCN11AQ9UI33 1791 aa26.48■■□□□ 1.83
SUPT4H1-202ENST00000577396 CABP4P57796 275 aa26.47■■□□□ 1.83
SUPT4H1-202ENST00000577396 SLC52A2Q9HAB3 445 aa26.47■■□□□ 1.83
SUPT4H1-202ENST00000577396 CEMIPQ8WUJ3 1361 aa26.46■■□□□ 1.83
SUPT4H1-202ENST00000577396 TMPOP42166 694 aaKnown RBP26.46■■□□□ 1.83
SUPT4H1-202ENST00000577396 ASAP1Q9ULH1 1129 aa26.44■■□□□ 1.82
SUPT4H1-202ENST00000577396 MCM10Q7L590 875 aa26.43■■□□□ 1.82
SUPT4H1-202ENST00000577396 ATG3Q9NT62 314 aa26.43■■□□□ 1.82
SUPT4H1-202ENST00000577396 RIPK4P57078 832 aa26.43■■□□□ 1.82
SUPT4H1-202ENST00000577396 DCTN1Q14203 1278 aa26.43■■□□□ 1.82
SUPT4H1-202ENST00000577396 RTF1Q92541 710 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms