RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 USP54Q70EL1 1684 aa21.97■■□□□ 1.11
SLC12A4-216ENST00000576377 CCDC7Q96M83 1385 aa21.97■■□□□ 1.11
SLC12A4-216ENST00000576377 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.1
SLC12A4-216ENST00000576377 PLEKHG2Q9H7P9 1386 aa21.95■■□□□ 1.1
SLC12A4-216ENST00000576377 C9orf131Q5VYM1 1079 aa21.94■■□□□ 1.1
SLC12A4-216ENST00000576377 ARHGAP27Q6ZUM4 889 aa21.93■■□□□ 1.1
SLC12A4-216ENST00000576377 N4BP2Q86UW6 1770 aaPredicted RBP21.93■■□□□ 1.1
SLC12A4-216ENST00000576377 KDM2BQ8NHM5 1336 aa21.92■■□□□ 1.1
SLC12A4-216ENST00000576377 CCNL1Q9UK58 526 aaPredicted RBP21.92■■□□□ 1.1
SLC12A4-216ENST00000576377 PLEKHG3A1L390 1219 aa21.91■■□□□ 1.1
SLC12A4-216ENST00000576377 MKRN1Q9UHC7 482 aaKnown RBP21.91■■□□□ 1.1
SLC12A4-216ENST00000576377 BCS1LQ9Y276 419 aa21.91■■□□□ 1.1
SLC12A4-216ENST00000576377 NSD2O96028 1365 aa21.9■■□□□ 1.1
SLC12A4-216ENST00000576377 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
SLC12A4-216ENST00000576377 CCDC85CA6NKD9 419 aa21.9■■□□□ 1.1
SLC12A4-216ENST00000576377 CTCFP49711 727 aaPredicted RBP21.9■■□□□ 1.1
SLC12A4-216ENST00000576377 C5P01031 1676 aa21.9■■□□□ 1.1
SLC12A4-216ENST00000576377 LBX1P52954 281 aa21.88■■□□□ 1.09
SLC12A4-216ENST00000576377 NLRP6P59044 892 aa21.88■■□□□ 1.09
SLC12A4-216ENST00000576377 TOGARAM1Q9Y4F4 1720 aa21.87■■□□□ 1.09
SLC12A4-216ENST00000576377 SMIM5Q71RC9 77 aa21.87■■□□□ 1.09
SLC12A4-216ENST00000576377 ARHGEF25Q86VW2 580 aa21.87■■□□□ 1.09
SLC12A4-216ENST00000576377 CDK19Q9BWU1 502 aa21.87■■□□□ 1.09
SLC12A4-216ENST00000576377 CCDC61Q9Y6R9 512 aa21.87■■□□□ 1.09
SLC12A4-216ENST00000576377 ERBB3P21860 1342 aa21.86■■□□□ 1.09
SLC12A4-216ENST00000576377 KIF13BQ9NQT8 1826 aa21.85■■□□□ 1.09
SLC12A4-216ENST00000576377 SYTL4Q96C24 671 aaPredicted RBP21.85■■□□□ 1.09
SLC12A4-216ENST00000576377 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
SLC12A4-216ENST00000576377 IL2RBP14784 551 aa21.84■■□□□ 1.09
SLC12A4-216ENST00000576377 AMIGO3Q86WK7 504 aa21.84■■□□□ 1.09
SLC12A4-216ENST00000576377 BRCA1P38398 1863 aaKnown RBP21.82■■□□□ 1.08
SLC12A4-216ENST00000576377 PRIM1P49642 420 aaKnown RBP21.82■■□□□ 1.08
SLC12A4-216ENST00000576377 AIDAQ96BJ3 306 aa21.82■■□□□ 1.08
SLC12A4-216ENST00000576377 TAF1LQ8IZX4 1826 aa21.81■■□□□ 1.08
SLC12A4-216ENST00000576377 ANKRD36BQ8N2N9 1353 aa21.8■■□□□ 1.08
SLC12A4-216ENST00000576377 SOX12O15370 315 aa21.8■■□□□ 1.08
SLC12A4-216ENST00000576377 A0A0G2JLW4 131 aa21.79■■□□□ 1.08
SLC12A4-216ENST00000576377 RNF181Q9P0P0 153 aa21.79■■□□□ 1.08
SLC12A4-216ENST00000576377 FLAD1Q8NFF5 587 aa21.78■■□□□ 1.08
SLC12A4-216ENST00000576377 ARFGEF1Q9Y6D6 1849 aa21.78■■□□□ 1.08
SLC12A4-216ENST00000576377 HSPA8P11142 646 aaKnown RBP21.77■■□□□ 1.08
SLC12A4-216ENST00000576377 DDX54Q8TDD1 881 aaKnown RBP21.77■■□□□ 1.08
SLC12A4-216ENST00000576377 CNTNAP1P78357 1384 aa21.76■■□□□ 1.07
SLC12A4-216ENST00000576377 NFAT5O94916 1531 aa21.76■■□□□ 1.07
SLC12A4-216ENST00000576377 FCHSD2O94868 740 aa21.76■■□□□ 1.07
SLC12A4-216ENST00000576377 UBR3Q6ZT12 1888 aa21.76■■□□□ 1.07
SLC12A4-216ENST00000576377 CREBZFQ9NS37 354 aa21.76■■□□□ 1.07
SLC12A4-216ENST00000576377 NLRP2Q9NX02 1062 aa21.76■■□□□ 1.07
SLC12A4-216ENST00000576377 SBF1O95248 1867 aa21.75■■□□□ 1.07
SLC12A4-216ENST00000576377 C4BP0C0L5 1744 aa21.75■■□□□ 1.07
SLC12A4-216ENST00000576377 VIRMAQ69YN4 1812 aaKnown RBP21.74■■□□□ 1.07
SLC12A4-216ENST00000576377 WBP1LQ9NX94 342 aa21.74■■□□□ 1.07
SLC12A4-216ENST00000576377 PHF14O94880 888 aa21.73■■□□□ 1.07
SLC12A4-216ENST00000576377 USP47Q96K76 1375 aa21.71■■□□□ 1.07
SLC12A4-216ENST00000576377 DPEP1P16444 411 aa21.7■■□□□ 1.06
SLC12A4-216ENST00000576377 TGFB2P61812 414 aa21.7■■□□□ 1.06
SLC12A4-216ENST00000576377 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
SLC12A4-216ENST00000576377 VEGFAP15692 232 aaPredicted RBP21.69■■□□□ 1.06
SLC12A4-216ENST00000576377 VEGFBP49765 207 aa21.68■■□□□ 1.06
SLC12A4-216ENST00000576377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.67■■□□□ 1.06
SLC12A4-216ENST00000576377 KCNH5Q8NCM2 988 aa21.67■■□□□ 1.06
SLC12A4-216ENST00000576377 MMP10P09238 476 aa21.66■■□□□ 1.06
SLC12A4-216ENST00000576377 AK7Q96M32 723 aa21.65■■□□□ 1.06
SLC12A4-216ENST00000576377 DCAF5Q96JK2 942 aa21.63■■□□□ 1.05
SLC12A4-216ENST00000576377 KCNA3P22001 575 aa21.62■■□□□ 1.05
SLC12A4-216ENST00000576377 GLTPD2A6NH11 291 aa21.61■■□□□ 1.05
SLC12A4-216ENST00000576377 POTECB2RU33 542 aa21.61■■□□□ 1.05
SLC12A4-216ENST00000576377 TIAM2Q8IVF5 1701 aa21.6■■□□□ 1.05
SLC12A4-216ENST00000576377 ANKRD24Q8TF21 1146 aa21.59■■□□□ 1.05
SLC12A4-216ENST00000576377 CABP2Q9NPB3 220 aa21.59■■□□□ 1.05
SLC12A4-216ENST00000576377 PALLDQ8WX93 1383 aa21.59■■□□□ 1.05
SLC12A4-216ENST00000576377 LTN1O94822 1766 aa21.59■■□□□ 1.05
SLC12A4-216ENST00000576377 SRPK2P78362 688 aaKnown RBP21.58■■□□□ 1.05
SLC12A4-216ENST00000576377 RASSF7Q02833 373 aa21.58■■□□□ 1.05
SLC12A4-216ENST00000576377 PRPF38BQ5VTL8 546 aaKnown RBP21.58■■□□□ 1.05
SLC12A4-216ENST00000576377 ZC3H4Q9UPT8 1303 aaKnown RBP21.57■■□□□ 1.04
SLC12A4-216ENST00000576377 KDM6AO15550 1401 aaPredicted RBP21.57■■□□□ 1.04
SLC12A4-216ENST00000576377 NSD3Q9BZ95 1437 aa21.57■■□□□ 1.04
SLC12A4-216ENST00000576377 CABP1Q9NZU7 370 aa21.57■■□□□ 1.04
SLC12A4-216ENST00000576377 SSFA2P28290 1259 aa21.56■■□□□ 1.04
SLC12A4-216ENST00000576377 POTEIP0CG38 1075 aa21.55■■□□□ 1.04
SLC12A4-216ENST00000576377 POTEJP0CG39 1038 aa21.55■■□□□ 1.04
SLC12A4-216ENST00000576377 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
SLC12A4-216ENST00000576377 CHADLQ6NUI6 762 aa21.54■■□□□ 1.04
SLC12A4-216ENST00000576377 TTC21BQ7Z4L5 1316 aa21.54■■□□□ 1.04
SLC12A4-216ENST00000576377 DALRD3Q5D0E6 543 aaKnown RBP21.52■■□□□ 1.04
SLC12A4-216ENST00000576377 MPHOSPH9Q99550 1183 aa21.52■■□□□ 1.04
SLC12A4-216ENST00000576377 MCOLN1Q9GZU1 580 aa21.52■■□□□ 1.04
SLC12A4-216ENST00000576377 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
SLC12A4-216ENST00000576377 PASKQ96RG2 1323 aa21.51■■□□□ 1.03
SLC12A4-216ENST00000576377 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
SLC12A4-216ENST00000576377 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
SLC12A4-216ENST00000576377 FAM208AQ9UK61 1670 aaKnown RBP21.5■■□□□ 1.03
SLC12A4-216ENST00000576377 MEGF6O75095 1541 aa21.49■■□□□ 1.03
SLC12A4-216ENST00000576377 LINC00116Q8NCU8 138 aa21.48■■□□□ 1.03
SLC12A4-216ENST00000576377 CCDC88AQ3V6T2 1871 aa21.47■■□□□ 1.03
SLC12A4-216ENST00000576377 MAP2K1Q02750 393 aaPredicted RBP21.47■■□□□ 1.03
SLC12A4-216ENST00000576377 MAP2P11137 1827 aaKnown RBP21.46■■□□□ 1.03
SLC12A4-216ENST00000576377 ZCRB1Q8TBF4 217 aaKnown RBP21.46■■□□□ 1.03
SLC12A4-216ENST00000576377 THSD7BQ9C0I4 1608 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms