RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PARP4Q9UKK3 1724 aaKnown RBP18.68■□□□□ 0.58
RPAIN-217ENST00000575711 OVOS2A0A0G2JMS6 1433 aa18.67■□□□□ 0.58
RPAIN-217ENST00000575711 TNS2Q63HR2 1409 aa18.67■□□□□ 0.58
RPAIN-217ENST00000575711 PDE3BQ13370 1112 aa18.67■□□□□ 0.58
RPAIN-217ENST00000575711 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
RPAIN-217ENST00000575711 LRRC37A3O60309 1634 aa18.66■□□□□ 0.58
RPAIN-217ENST00000575711 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
RPAIN-217ENST00000575711 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
RPAIN-217ENST00000575711 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
RPAIN-217ENST00000575711 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
RPAIN-217ENST00000575711 ILDR2Q71H61 639 aa18.64■□□□□ 0.57
RPAIN-217ENST00000575711 SPG7Q9UQ90 795 aa18.64■□□□□ 0.57
RPAIN-217ENST00000575711 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
RPAIN-217ENST00000575711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.572e-8■□□□□ 9.4
RPAIN-217ENST00000575711 FCHSD2O94868 740 aa18.62■□□□□ 0.57
RPAIN-217ENST00000575711 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
RPAIN-217ENST00000575711 PLEKHO1Q53GL0 409 aaPredicted RBP18.62■□□□□ 0.57
RPAIN-217ENST00000575711 RSPH6AQ9H0K4 717 aa18.62■□□□□ 0.57
RPAIN-217ENST00000575711 PCDH11XQ9BZA7 1347 aa18.61■□□□□ 0.57
RPAIN-217ENST00000575711 PCDH11YQ9BZA8 1340 aa18.61■□□□□ 0.57
RPAIN-217ENST00000575711 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
RPAIN-217ENST00000575711 DDX54Q8TDD1 881 aaKnown RBP18.61■□□□□ 0.57
RPAIN-217ENST00000575711 PNNQ9H307 717 aaKnown RBP18.61■□□□□ 0.57
RPAIN-217ENST00000575711 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
RPAIN-217ENST00000575711 MARCH10Q8NA82 808 aaPredicted RBP18.6■□□□□ 0.57
RPAIN-217ENST00000575711 NEFMP07197 916 aa18.59■□□□□ 0.57
RPAIN-217ENST00000575711 PKD1L3Q7Z443 1732 aa18.58■□□□□ 0.57
RPAIN-217ENST00000575711 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
RPAIN-217ENST00000575711 FAM182BQ5T319 152 aa18.58■□□□□ 0.56
RPAIN-217ENST00000575711 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
RPAIN-217ENST00000575711 FAM196AQ6ZSG2 479 aa18.57■□□□□ 0.56
RPAIN-217ENST00000575711 IFNL2Q8IZJ0 200 aa18.57■□□□□ 0.56
RPAIN-217ENST00000575711 MIER1Q8N108 512 aa18.57■□□□□ 0.56
RPAIN-217ENST00000575711 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
RPAIN-217ENST00000575711 CYP27B1O15528 508 aa18.56■□□□□ 0.56
RPAIN-217ENST00000575711 C1orf141Q5JVX7 400 aa18.56■□□□□ 0.56
RPAIN-217ENST00000575711 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
RPAIN-217ENST00000575711 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
RPAIN-217ENST00000575711 SHANK3Q9BYB0 1731 aa18.55■□□□□ 0.56
RPAIN-217ENST00000575711 PHKG2P15735 406 aa18.55■□□□□ 0.56
RPAIN-217ENST00000575711 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
RPAIN-217ENST00000575711 GAS2L2Q8NHY3 880 aa18.55■□□□□ 0.56
RPAIN-217ENST00000575711 PHACTR3Q96KR7 559 aa18.54■□□□□ 0.56
RPAIN-217ENST00000575711 PLEKHF1Q96S99 279 aa18.54■□□□□ 0.56
RPAIN-217ENST00000575711 BCL9O00512 1426 aa18.54■□□□□ 0.56
RPAIN-217ENST00000575711 HSP90AB1P08238 724 aaKnown RBP18.53■□□□□ 0.56
RPAIN-217ENST00000575711 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
RPAIN-217ENST00000575711 NKX1-1Q15270 411 aaPredicted RBP18.51■□□□□ 0.55
RPAIN-217ENST00000575711 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
RPAIN-217ENST00000575711 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
RPAIN-217ENST00000575711 FAM9BQ8IZU0 186 aa18.5■□□□□ 0.55
RPAIN-217ENST00000575711 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
RPAIN-217ENST00000575711 DCAF5Q96JK2 942 aa18.49■□□□□ 0.55
RPAIN-217ENST00000575711 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
RPAIN-217ENST00000575711 GNAT3A8MTJ3 354 aa18.48■□□□□ 0.55
RPAIN-217ENST00000575711 TRIM37O94972 964 aa18.48■□□□□ 0.55
RPAIN-217ENST00000575711 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
RPAIN-217ENST00000575711 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
RPAIN-217ENST00000575711 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
RPAIN-217ENST00000575711 RTF1Q92541 710 aaKnown RBP18.46■□□□□ 0.55
RPAIN-217ENST00000575711 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
RPAIN-217ENST00000575711 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
RPAIN-217ENST00000575711 SF3B2Q13435 895 aaKnown RBP18.45■□□□□ 0.54
RPAIN-217ENST00000575711 CCDC125Q86Z20 511 aa18.45■□□□□ 0.54
RPAIN-217ENST00000575711 BCL11BQ9C0K0 894 aaPredicted RBP18.45■□□□□ 0.54
RPAIN-217ENST00000575711 DOT1LQ8TEK3 1739 aa18.44■□□□□ 0.54
RPAIN-217ENST00000575711 EP400Q96L91 3159 aa18.44■□□□□ 0.54
RPAIN-217ENST00000575711 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
RPAIN-217ENST00000575711 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
RPAIN-217ENST00000575711 KCNQ2O43526 872 aa18.44■□□□□ 0.54
RPAIN-217ENST00000575711 TMPOP42166 694 aaKnown RBP18.44■□□□□ 0.54
RPAIN-217ENST00000575711 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
RPAIN-217ENST00000575711 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
RPAIN-217ENST00000575711 NHSQ6T4R5 1651 aa18.43■□□□□ 0.54
RPAIN-217ENST00000575711 APAF1O14727 1248 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 RIPK4P57078 832 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 CABP4P57796 275 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 LMOD3Q0VAK6 560 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 TMOD3Q9NYL9 352 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
RPAIN-217ENST00000575711 SBF2Q86WG5 1849 aa18.42■□□□□ 0.54
RPAIN-217ENST00000575711 TOGARAM1Q9Y4F4 1720 aa18.41■□□□□ 0.54
RPAIN-217ENST00000575711 PTF1AQ7RTS3 328 aa18.41■□□□□ 0.54
RPAIN-217ENST00000575711 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
RPAIN-217ENST00000575711 APBA3O96018 575 aa18.4■□□□□ 0.54
RPAIN-217ENST00000575711 ADAMTS7Q9UKP4 1686 aa18.39■□□□□ 0.53
RPAIN-217ENST00000575711 TEFQ10587 303 aa18.39■□□□□ 0.53
RPAIN-217ENST00000575711 MCM10Q7L590 875 aa18.39■□□□□ 0.53
RPAIN-217ENST00000575711 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
RPAIN-217ENST00000575711 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
RPAIN-217ENST00000575711 SCN11AQ9UI33 1791 aa18.38■□□□□ 0.53
RPAIN-217ENST00000575711 SOCS7O14512 581 aa18.38■□□□□ 0.53
RPAIN-217ENST00000575711 BAG6P46379 1132 aa18.38■□□□□ 0.53
RPAIN-217ENST00000575711 DCTN1Q14203 1278 aa18.38■□□□□ 0.53
RPAIN-217ENST00000575711 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
RPAIN-217ENST00000575711 PIGBQ92521 554 aa18.38■□□□□ 0.53
RPAIN-217ENST00000575711 MRC1P22897 1456 aa18.38■□□□□ 0.53
RPAIN-217ENST00000575711 TNS1Q9HBL0 1735 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms