RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 FBLN1P23142 703 aa14.61□□□□□ -0.07
TVP23B-208ENST00000575261 RRS1Q15050 365 aaKnown RBP14.61□□□□□ -0.07
TVP23B-208ENST00000575261 SYT17Q9BSW7 474 aa14.61□□□□□ -0.07
TVP23B-208ENST00000575261 TUBGCP6Q96RT7 1819 aa14.61□□□□□ -0.07
TVP23B-208ENST00000575261 NSD2O96028 1365 aa14.6□□□□□ -0.07
TVP23B-208ENST00000575261 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
TVP23B-208ENST00000575261 FYB1O15117 783 aa14.6□□□□□ -0.07
TVP23B-208ENST00000575261 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
TVP23B-208ENST00000575261 CDCA8Q53HL2 280 aa14.6□□□□□ -0.07
TVP23B-208ENST00000575261 ZCRB1Q8TBF4 217 aaKnown RBP14.6□□□□□ -0.07
TVP23B-208ENST00000575261 ARXQ96QS3 562 aa14.6□□□□□ -0.07
TVP23B-208ENST00000575261 GGNBP2Q9H3C7 697 aa14.6□□□□□ -0.07
TVP23B-208ENST00000575261 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
TVP23B-208ENST00000575261 PRIM1P49642 420 aaKnown RBP14.59□□□□□ -0.07
TVP23B-208ENST00000575261 AKT1S1Q96B36 256 aa14.59□□□□□ -0.07
TVP23B-208ENST00000575261 FLT4P35916 1363 aa14.59□□□□□ -0.07
TVP23B-208ENST00000575261 KIF24Q5T7B8 1368 aa14.59□□□□□ -0.07
TVP23B-208ENST00000575261 COL24A1Q17RW2 1714 aa14.58□□□□□ -0.07
TVP23B-208ENST00000575261 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
TVP23B-208ENST00000575261 SLC16A10Q8TF71 515 aa14.58□□□□□ -0.08
TVP23B-208ENST00000575261 RAPGEF4Q8WZA2 1011 aa14.58□□□□□ -0.08
TVP23B-208ENST00000575261 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
TVP23B-208ENST00000575261 INSRP06213 1382 aa14.58□□□□□ -0.08
TVP23B-208ENST00000575261 PNPLA7Q6ZV29 1317 aa14.57□□□□□ -0.08
TVP23B-208ENST00000575261 POLD1P28340 1107 aa14.56□□□□□ -0.08
TVP23B-208ENST00000575261 USHBP1Q8N6Y0 703 aa14.56□□□□□ -0.08
TVP23B-208ENST00000575261 TFCP2L1Q9NZI6 479 aa14.56□□□□□ -0.08
TVP23B-208ENST00000575261 CHD4Q14839 1912 aa14.56□□□□□ -0.08
TVP23B-208ENST00000575261 NSD3Q9BZ95 1437 aa14.56□□□□□ -0.08
TVP23B-208ENST00000575261 ANKRD26Q9UPS8 1709 aa14.55□□□□□ -0.08
TVP23B-208ENST00000575261 TATP17735 454 aaPredicted RBP14.55□□□□□ -0.08
TVP23B-208ENST00000575261 CCNL1Q9UK58 526 aaPredicted RBP14.55□□□□□ -0.08
TVP23B-208ENST00000575261 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
TVP23B-208ENST00000575261 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
TVP23B-208ENST00000575261 C5P01031 1676 aa14.55□□□□□ -0.08
TVP23B-208ENST00000575261 KCNQ4P56696 695 aa14.54□□□□□ -0.08
TVP23B-208ENST00000575261 HSP90AB2PQ58FF8 381 aa14.54□□□□□ -0.08
TVP23B-208ENST00000575261 PKD1L3Q7Z443 1732 aa14.54□□□□□ -0.08
TVP23B-208ENST00000575261 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.08
TVP23B-208ENST00000575261 KLHL34Q8N239 644 aa14.52□□□□□ -0.09
TVP23B-208ENST00000575261 NCAPD2Q15021 1401 aa14.51□□□□□ -0.09
TVP23B-208ENST00000575261 TIMELESSQ9UNS1 1208 aa14.51□□□□□ -0.09
TVP23B-208ENST00000575261 HMGB2P26583 209 aaKnown RBP14.5□□□□□ -0.09
TVP23B-208ENST00000575261 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
TVP23B-208ENST00000575261 CARD14Q9BXL6 1004 aa14.5□□□□□ -0.09
TVP23B-208ENST00000575261 EMILIN1Q9Y6C2 1016 aa14.5□□□□□ -0.09
TVP23B-208ENST00000575261 TAF1LQ8IZX4 1826 aa14.5□□□□□ -0.09
TVP23B-208ENST00000575261 PALLDQ8WX93 1383 aa14.49□□□□□ -0.09
TVP23B-208ENST00000575261 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
TVP23B-208ENST00000575261 ITGB4P16144 1822 aa14.49□□□□□ -0.09
TVP23B-208ENST00000575261 CYP27B1O15528 508 aa14.48□□□□□ -0.09
TVP23B-208ENST00000575261 MSH5O43196 834 aa14.48□□□□□ -0.09
TVP23B-208ENST00000575261 GPR162Q16538 588 aa14.48□□□□□ -0.09
TVP23B-208ENST00000575261 C4BP0C0L5 1744 aa14.47□□□□□ -0.09
TVP23B-208ENST00000575261 PPM1GO15355 546 aaPredicted RBP14.47□□□□□ -0.09
TVP23B-208ENST00000575261 MPRIPQ6WCQ1 1025 aa14.47□□□□□ -0.09
TVP23B-208ENST00000575261 MAP2P11137 1827 aaKnown RBP14.47□□□□□ -0.09
TVP23B-208ENST00000575261 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
TVP23B-208ENST00000575261 WASHC2AQ641Q2 1341 aa14.45□□□□□ -0.1
TVP23B-208ENST00000575261 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
TVP23B-208ENST00000575261 FLAD1Q8NFF5 587 aa14.45□□□□□ -0.1
TVP23B-208ENST00000575261 NLGN2Q8NFZ4 835 aa14.45□□□□□ -0.1
TVP23B-208ENST00000575261 SMARCC1Q92922 1105 aaPredicted RBP14.45□□□□□ -0.1
TVP23B-208ENST00000575261 SPG7Q9UQ90 795 aa14.45□□□□□ -0.1
TVP23B-208ENST00000575261 UBR3Q6ZT12 1888 aa14.44□□□□□ -0.1
TVP23B-208ENST00000575261 NKX1-1Q15270 411 aaPredicted RBP14.43□□□□□ -0.1
TVP23B-208ENST00000575261 MSL1Q68DK7 614 aa14.43□□□□□ -0.1
TVP23B-208ENST00000575261 AK7Q96M32 723 aa14.43□□□□□ -0.1
TVP23B-208ENST00000575261 POLR3GLQ9BT43 218 aa14.43□□□□□ -0.1
TVP23B-208ENST00000575261 PLEKHG2Q9H7P9 1386 aa14.43□□□□□ -0.1
TVP23B-208ENST00000575261 EYA1Q99502 592 aa14.42□□□□□ -0.1
TVP23B-208ENST00000575261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
TVP23B-208ENST00000575261 PIGBQ92521 554 aa14.41□□□□□ -0.1
TVP23B-208ENST00000575261 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
TVP23B-208ENST00000575261 TMOD3Q9NYL9 352 aa14.4□□□□□ -0.1
TVP23B-208ENST00000575261 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
TVP23B-208ENST00000575261 GRIN3BO60391 1043 aa14.39□□□□□ -0.11
TVP23B-208ENST00000575261 SIK1P57059 783 aa14.39□□□□□ -0.11
TVP23B-208ENST00000575261 EIF4A2Q14240 407 aaKnown RBP14.39□□□□□ -0.11
TVP23B-208ENST00000575261 IFNL2Q8IZJ0 200 aa14.39□□□□□ -0.11
TVP23B-208ENST00000575261 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
TVP23B-208ENST00000575261 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
TVP23B-208ENST00000575261 PHF14O94880 888 aa14.38□□□□□ -0.11
TVP23B-208ENST00000575261 PHKG2P15735 406 aa14.38□□□□□ -0.11
TVP23B-208ENST00000575261 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
TVP23B-208ENST00000575261 SSFA2P28290 1259 aa14.38□□□□□ -0.11
TVP23B-208ENST00000575261 TNNT2P45379 298 aaPredicted RBP14.38□□□□□ -0.11
TVP23B-208ENST00000575261 EIF4G2P78344 907 aaKnown RBP eCLIP14.38□□□□□ -0.11
TVP23B-208ENST00000575261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.37□□□□□ -0.11
TVP23B-208ENST00000575261 C1QTNF8P60827 252 aa14.37□□□□□ -0.11
TVP23B-208ENST00000575261 AMIGO3Q86WK7 504 aa14.37□□□□□ -0.11
TVP23B-208ENST00000575261 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
TVP23B-208ENST00000575261 IGSF1Q8N6C5 1336 aa14.37□□□□□ -0.11
TVP23B-208ENST00000575261 CEP350Q5VT06 3117 aa14.37□□□□□ -0.11
TVP23B-208ENST00000575261 GIGYF1O75420 1035 aaPredicted RBP14.36□□□□□ -0.11
TVP23B-208ENST00000575261 ZNF831Q5JPB2 1677 aa14.36□□□□□ -0.11
TVP23B-208ENST00000575261 HSPA5P11021 654 aaKnown RBP14.35□□□□□ -0.11
TVP23B-208ENST00000575261 ASAP1Q9ULH1 1129 aa14.35□□□□□ -0.11
TVP23B-208ENST00000575261 KDRP35968 1356 aa14.34□□□□□ -0.11
TVP23B-208ENST00000575261 SENP3-EIF4A1A0A087X0R7 540 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms