RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 ATP7BP35670 1465 aa7.9□□□□□ -1.14
TRIM25-208ENST00000574234 NUP155O75694 1391 aa7.9□□□□□ -1.14
TRIM25-208ENST00000574234 C1orf115Q9H7X2 142 aa7.9□□□□□ -1.14
TRIM25-208ENST00000574234 ADCY9O60503 1353 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 DHX57Q6P158 1386 aaKnown RBP7.89□□□□□ -1.15
TRIM25-208ENST00000574234 AATKQ6ZMQ8 1374 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 ABCC11Q96J66 1382 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 RPGRIP1LQ68CZ1 1315 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 MAP3K13O43283 966 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 APLP1P51693 650 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 MKRN3Q13064 507 aaKnown RBP7.89□□□□□ -1.15
TRIM25-208ENST00000574234 COL13A1Q5TAT6 717 aaPredicted RBP7.89□□□□□ -1.15
TRIM25-208ENST00000574234 KIF12Q96FN5 646 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 TUBGCP6Q96RT7 1819 aa7.89□□□□□ -1.15
TRIM25-208ENST00000574234 SSH2Q76I76 1423 aa7.88□□□□□ -1.15
TRIM25-208ENST00000574234 ANKARQ7Z5J8 1434 aa7.88□□□□□ -1.15
TRIM25-208ENST00000574234 ROCK1Q13464 1354 aa7.88□□□□□ -1.15
TRIM25-208ENST00000574234 SLC15A2Q16348 729 aa7.88□□□□□ -1.15
TRIM25-208ENST00000574234 DNAJC5GQ8N7S2 189 aa7.88□□□□□ -1.15
TRIM25-208ENST00000574234 PRDM11Q9NQV5 511 aa7.88□□□□□ -1.15
TRIM25-208ENST00000574234 NHSQ6T4R5 1651 aa7.88□□□□□ -1.15
TRIM25-208ENST00000574234 BCL9O00512 1426 aa7.87□□□□□ -1.15
TRIM25-208ENST00000574234 GRIN3BO60391 1043 aa7.87□□□□□ -1.15
TRIM25-208ENST00000574234 WAPLQ7Z5K2 1190 aa7.87□□□□□ -1.15
TRIM25-208ENST00000574234 FAM117AQ9C073 453 aa7.87□□□□□ -1.15
TRIM25-208ENST00000574234 STK32BQ9NY57 414 aa7.87□□□□□ -1.15
TRIM25-208ENST00000574234 THRAP3Q9Y2W1 955 aaKnown RBP7.87□□□□□ -1.15
TRIM25-208ENST00000574234 PLEKHH1Q9ULM0 1364 aa7.86□□□□□ -1.15
TRIM25-208ENST00000574234 TNS4Q8IZW8 715 aa7.86□□□□□ -1.15
TRIM25-208ENST00000574234 KIAA0232Q92628 1395 aa7.85□□□□□ -1.15
TRIM25-208ENST00000574234 GPR37O15354 613 aa7.85□□□□□ -1.15
TRIM25-208ENST00000574234 TCP11L2Q8N4U5 519 aa7.85□□□□□ -1.15
TRIM25-208ENST00000574234 SIRT1Q96EB6 747 aa7.85□□□□□ -1.15
TRIM25-208ENST00000574234 ARID3AQ99856 593 aa7.85□□□□□ -1.15
TRIM25-208ENST00000574234 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.15
TRIM25-208ENST00000574234 PLEKHG3A1L390 1219 aa7.84□□□□□ -1.15
TRIM25-208ENST00000574234 ZNF316A6NFI3 1004 aaPredicted RBP7.84□□□□□ -1.15
TRIM25-208ENST00000574234 JMYQ8N9B5 988 aa7.84□□□□□ -1.15
TRIM25-208ENST00000574234 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
TRIM25-208ENST00000574234 USP35Q9P2H5 1018 aa7.84□□□□□ -1.15
TRIM25-208ENST00000574234 BTAF1O14981 1849 aa7.84□□□□□ -1.15
TRIM25-208ENST00000574234 YTHDC2Q9H6S0 1430 aaKnown RBP7.84□□□□□ -1.15
TRIM25-208ENST00000574234 TULP4Q9NRJ4 1543 aa7.83□□□□□ -1.16
TRIM25-208ENST00000574234 SPDYE16A6NNV3 312 aaPredicted RBP7.83□□□□□ -1.16
TRIM25-208ENST00000574234 TXNRD1Q16881 649 aa7.83□□□□□ -1.16
TRIM25-208ENST00000574234 PPP1R15BQ5SWA1 713 aa7.83□□□□□ -1.16
TRIM25-208ENST00000574234 PIK3C2AO00443 1686 aa7.83□□□□□ -1.16
TRIM25-208ENST00000574234 COL5A2P05997 1499 aaPredicted RBP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 MINK1Q8N4C8 1332 aaPredicted RBP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 ACIN1Q9UKV3 1341 aaKnown RBP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 CRB1P82279 1406 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 DPYSL4O14531 572 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 KIF3CO14782 793 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 PAK3O75914 559 aaPredicted RBP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 YBX3P16989 372 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 EVA1CP58658 441 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 FLIIQ13045 1269 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 PDIA6Q15084 440 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 CHRNA2Q15822 529 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 LARP1Q6PKG0 1096 aaKnown RBP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 PELP1Q8IZL8 1130 aaKnown RBP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 PMFBP1Q8TBY8 1022 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 SLC16A10Q8TF71 515 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 DDRGK1Q96HY6 314 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 GPHNQ9NQX3 736 aaPredicted RBP7.81□□□□□ -1.16
TRIM25-208ENST00000574234 EMILIN3Q9NT22 766 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 STK26Q9P289 416 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 CPDO75976 1380 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 TRPM1Q7Z4N2 1603 aa7.81□□□□□ -1.16
TRIM25-208ENST00000574234 PIK3C2GO75747 1445 aa7.8□□□□□ -1.16
TRIM25-208ENST00000574234 RGPD5Q99666 1765 aa7.8□□□□□ -1.16
TRIM25-208ENST00000574234 APBB1O00213 710 aa7.8□□□□□ -1.16
TRIM25-208ENST00000574234 KLRG1Q96E93 195 aa7.8□□□□□ -1.16
TRIM25-208ENST00000574234 EIF3AQ14152 1382 aaKnown RBP7.8□□□□□ -1.16
TRIM25-208ENST00000574234 COL18A1P39060 1754 aa7.79□□□□□ -1.16
TRIM25-208ENST00000574234 CICQ96RK0 1608 aaPredicted RBP7.79□□□□□ -1.16
TRIM25-208ENST00000574234 KIAA1210Q9ULL0 1709 aa7.79□□□□□ -1.16
TRIM25-208ENST00000574234 PRKAR2AP13861 404 aaKnown RBP7.79□□□□□ -1.16
TRIM25-208ENST00000574234 POLD1P28340 1107 aa7.79□□□□□ -1.16
TRIM25-208ENST00000574234 PTF1AQ7RTS3 328 aa7.79□□□□□ -1.16
TRIM25-208ENST00000574234 NPM2Q86SE8 214 aaKnown RBP7.79□□□□□ -1.16
TRIM25-208ENST00000574234 NLGN2Q8NFZ4 835 aa7.79□□□□□ -1.16
TRIM25-208ENST00000574234 ANKRD30BQ9BXX2 1392 aa7.79□□□□□ -1.16
TRIM25-208ENST00000574234 LY75O60449 1722 aa7.78□□□□□ -1.16
TRIM25-208ENST00000574234 TOMM70O94826 608 aa7.78□□□□□ -1.16
TRIM25-208ENST00000574234 FAM50AQ14320 339 aaKnown RBP7.78□□□□□ -1.16
TRIM25-208ENST00000574234 DDB1Q16531 1140 aa7.78□□□□□ -1.16
TRIM25-208ENST00000574234 WWC3Q9ULE0 1092 aa7.78□□□□□ -1.16
TRIM25-208ENST00000574234 BRD4O60885 1362 aaPredicted RBP7.77□□□□□ -1.17
TRIM25-208ENST00000574234 ZC3H6P61129 1189 aaKnown RBP7.77□□□□□ -1.17
TRIM25-208ENST00000574234 AMHR2Q16671 573 aa7.77□□□□□ -1.17
TRIM25-208ENST00000574234 ZNF526Q8TF50 670 aaPredicted RBP7.77□□□□□ -1.17
TRIM25-208ENST00000574234 KAT6BQ8WYB5 2073 aa7.77□□□□□ -1.17
TRIM25-208ENST00000574234 ADGRF5Q8IZF2 1346 aa7.77□□□□□ -1.17
TRIM25-208ENST00000574234 IRF6O14896 467 aa7.76□□□□□ -1.17
TRIM25-208ENST00000574234 MAP2K5Q13163 448 aa7.76□□□□□ -1.17
TRIM25-208ENST00000574234 TMEM132EQ6IEE7 984 aa7.76□□□□□ -1.17
TRIM25-208ENST00000574234 CCDC102AQ96A19 550 aa7.76□□□□□ -1.17
TRIM25-208ENST00000574234 GOPCQ9HD26 462 aa7.76□□□□□ -1.17
TRIM25-208ENST00000574234 ABCC6O95255 1503 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms