RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 U2AF1L5P0DN76 240 aaPredicted RBP18.07■□□□□ 0.48
NDE1-209ENST00000574109 U2AF1Q01081 240 aaKnown RBP eCLIP18.07■□□□□ 0.48
NDE1-209ENST00000574109 MYT1Q01538 1121 aa18.07■□□□□ 0.48
NDE1-209ENST00000574109 SULT6B1Q6IMI4 303 aa18.07■□□□□ 0.48
NDE1-209ENST00000574109 USHBP1Q8N6Y0 703 aa18.07■□□□□ 0.48
NDE1-209ENST00000574109 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
NDE1-209ENST00000574109 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
NDE1-209ENST00000574109 FCHSD2O94868 740 aa18.06■□□□□ 0.48
NDE1-209ENST00000574109 NEFMP07197 916 aa18.06■□□□□ 0.48
NDE1-209ENST00000574109 DDB1Q16531 1140 aa18.06■□□□□ 0.48
NDE1-209ENST00000574109 AMOTQ4VCS5 1084 aa18.05■□□□□ 0.48
NDE1-209ENST00000574109 DLG5Q8TDM6 1919 aa18.05■□□□□ 0.48
NDE1-209ENST00000574109 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
NDE1-209ENST00000574109 DOT1LQ8TEK3 1739 aa18.04■□□□□ 0.48
NDE1-209ENST00000574109 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
NDE1-209ENST00000574109 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
NDE1-209ENST00000574109 BCL9O00512 1426 aa18.04■□□□□ 0.48
NDE1-209ENST00000574109 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
NDE1-209ENST00000574109 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
NDE1-209ENST00000574109 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
NDE1-209ENST00000574109 ADAMTS7Q9UKP4 1686 aa18.03■□□□□ 0.48
NDE1-209ENST00000574109 EXOC5O00471 708 aa18.02■□□□□ 0.48
NDE1-209ENST00000574109 HMOX1P09601 288 aa18.02■□□□□ 0.48
NDE1-209ENST00000574109 AEBP1Q8IUX7 1158 aa18.02■□□□□ 0.48
NDE1-209ENST00000574109 PDE3BQ13370 1112 aa18.01■□□□□ 0.47
NDE1-209ENST00000574109 PLEKHO1Q53GL0 409 aaPredicted RBP18.01■□□□□ 0.47
NDE1-209ENST00000574109 ZCRB1Q8TBF4 217 aaKnown RBP18.01■□□□□ 0.47
NDE1-209ENST00000574109 EP400Q96L91 3159 aa18.01■□□□□ 0.47
NDE1-209ENST00000574109 MAPK8IP3Q9UPT6 1336 aa18■□□□□ 0.47
NDE1-209ENST00000574109 PRKAR2BP31323 418 aa18■□□□□ 0.47
NDE1-209ENST00000574109 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
NDE1-209ENST00000574109 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
NDE1-209ENST00000574109 KAT6BQ8WYB5 2073 aa17.99■□□□□ 0.47
NDE1-209ENST00000574109 TOGARAM1Q9Y4F4 1720 aa17.99■□□□□ 0.47
NDE1-209ENST00000574109 ITGB4P16144 1822 aa17.98■□□□□ 0.47
NDE1-209ENST00000574109 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
NDE1-209ENST00000574109 RGPD3A6NKT7 1758 aaPredicted RBP17.97■□□□□ 0.47
NDE1-209ENST00000574109 RGPD4Q7Z3J3 1758 aa17.97■□□□□ 0.47
NDE1-209ENST00000574109 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
NDE1-209ENST00000574109 C1orf141Q5JVX7 400 aa17.97■□□□□ 0.47
NDE1-209ENST00000574109 TNS1Q9HBL0 1735 aaKnown RBP17.97■□□□□ 0.47
NDE1-209ENST00000574109 ZNF530Q6P9A1 599 aaPredicted RBP17.96■□□□□ 0.47
NDE1-209ENST00000574109 IFNL2Q8IZJ0 200 aa17.96■□□□□ 0.47
NDE1-209ENST00000574109 MIER1Q8N108 512 aa17.96■□□□□ 0.47
NDE1-209ENST00000574109 MRC1P22897 1456 aa17.95■□□□□ 0.46
NDE1-209ENST00000574109 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
NDE1-209ENST00000574109 SIPA1L3O60292 1781 aaPredicted RBP17.95■□□□□ 0.46
NDE1-209ENST00000574109 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
NDE1-209ENST00000574109 RUNDC1Q96C34 613 aa17.95■□□□□ 0.46
NDE1-209ENST00000574109 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
NDE1-209ENST00000574109 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
NDE1-209ENST00000574109 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
NDE1-209ENST00000574109 BTAF1O14981 1849 aa17.93■□□□□ 0.46
NDE1-209ENST00000574109 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
NDE1-209ENST00000574109 CYP27B1O15528 508 aa17.92■□□□□ 0.46
NDE1-209ENST00000574109 PHKG2P15735 406 aa17.92■□□□□ 0.46
NDE1-209ENST00000574109 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
NDE1-209ENST00000574109 NKX1-1Q15270 411 aaPredicted RBP17.92■□□□□ 0.46
NDE1-209ENST00000574109 MARCH10Q8NA82 808 aaPredicted RBP17.92■□□□□ 0.46
NDE1-209ENST00000574109 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
NDE1-209ENST00000574109 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
NDE1-209ENST00000574109 PAPPAQ13219 1627 aa17.9■□□□□ 0.46
NDE1-209ENST00000574109 NFE2L2Q16236 605 aa17.9■□□□□ 0.46
NDE1-209ENST00000574109 MTHFSDQ2M296 383 aaKnown RBP17.9■□□□□ 0.46
NDE1-209ENST00000574109 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.46
NDE1-209ENST00000574109 GNAT3A8MTJ3 354 aa17.89■□□□□ 0.45
NDE1-209ENST00000574109 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
NDE1-209ENST00000574109 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
NDE1-209ENST00000574109 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
NDE1-209ENST00000574109 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
NDE1-209ENST00000574109 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
NDE1-209ENST00000574109 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
NDE1-209ENST00000574109 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
NDE1-209ENST00000574109 CEMIPQ8WUJ3 1361 aa17.86■□□□□ 0.45
NDE1-209ENST00000574109 ZNF831Q5JPB2 1677 aa17.86■□□□□ 0.45
NDE1-209ENST00000574109 LY75O60449 1722 aa17.86■□□□□ 0.45
NDE1-209ENST00000574109 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
NDE1-209ENST00000574109 ERVV-2B6SEH9 535 aa17.85■□□□□ 0.45
NDE1-209ENST00000574109 TMPOP42166 694 aaKnown RBP17.85■□□□□ 0.45
NDE1-209ENST00000574109 CICQ96RK0 1608 aaPredicted RBP17.85■□□□□ 0.45
NDE1-209ENST00000574109 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
NDE1-209ENST00000574109 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
NDE1-209ENST00000574109 RNMTO43148 476 aaKnown RBP17.82■□□□□ 0.44
NDE1-209ENST00000574109 CALD1Q05682 793 aaKnown RBP17.82■□□□□ 0.44
NDE1-209ENST00000574109 BCL11BQ9C0K0 894 aaPredicted RBP17.82■□□□□ 0.44
NDE1-209ENST00000574109 RREB1Q92766 1687 aa17.82■□□□□ 0.44
NDE1-209ENST00000574109 APAF1O14727 1248 aa17.81■□□□□ 0.44
NDE1-209ENST00000574109 RIPK4P57078 832 aa17.81■□□□□ 0.44
NDE1-209ENST00000574109 TEFQ10587 303 aa17.81■□□□□ 0.44
NDE1-209ENST00000574109 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
NDE1-209ENST00000574109 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
NDE1-209ENST00000574109 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
NDE1-209ENST00000574109 FAM182BQ5T319 152 aa17.8■□□□□ 0.44
NDE1-209ENST00000574109 MPRIPQ6WCQ1 1025 aa17.8■□□□□ 0.44
NDE1-209ENST00000574109 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
NDE1-209ENST00000574109 CABP4P57796 275 aa17.79■□□□□ 0.44
NDE1-209ENST00000574109 HMGB2P26583 209 aaKnown RBP17.78■□□□□ 0.44
NDE1-209ENST00000574109 ILDR2Q71H61 639 aa17.78■□□□□ 0.44
NDE1-209ENST00000574109 SYTL4Q96C24 671 aaPredicted RBP17.78■□□□□ 0.44
NDE1-209ENST00000574109 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms