RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
CLDN7-207ENST00000574070 TRIM37O94972 964 aa23.31■■□□□ 1.32
CLDN7-207ENST00000574070 MEGF6O75095 1541 aa23.31■■□□□ 1.32
CLDN7-207ENST00000574070 ZCRB1Q8TBF4 217 aaKnown RBP23.3■■□□□ 1.32
CLDN7-207ENST00000574070 CAMKK2Q96RR4 588 aa23.29■■□□□ 1.32
CLDN7-207ENST00000574070 YY1P25490 414 aa23.28■■□□□ 1.32
CLDN7-207ENST00000574070 DIAPH1O60610 1272 aaKnown RBP23.27■■□□□ 1.32
CLDN7-207ENST00000574070 PPP2R1AP30153 589 aa23.27■■□□□ 1.32
CLDN7-207ENST00000574070 CFAP53Q96M91 514 aa23.27■■□□□ 1.32
CLDN7-207ENST00000574070 APBA3O96018 575 aa23.26■■□□□ 1.31
CLDN7-207ENST00000574070 IL13P35225 146 aa23.26■■□□□ 1.31
CLDN7-207ENST00000574070 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
CLDN7-207ENST00000574070 NBPF14Q5TI25 921 aa23.25■■□□□ 1.31
CLDN7-207ENST00000574070 DCAF8L1A6NGE4 600 aa23.24■■□□□ 1.31
CLDN7-207ENST00000574070 ACSBG1Q96GR2 724 aa23.24■■□□□ 1.31
CLDN7-207ENST00000574070 RREB1Q92766 1687 aa23.24■■□□□ 1.31
CLDN7-207ENST00000574070 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
CLDN7-207ENST00000574070 SPG7Q9UQ90 795 aa23.23■■□□□ 1.31
CLDN7-207ENST00000574070 NCAPD2Q15021 1401 aa23.23■■□□□ 1.31
CLDN7-207ENST00000574070 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
CLDN7-207ENST00000574070 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
CLDN7-207ENST00000574070 AEBP1Q8IUX7 1158 aa23.21■■□□□ 1.31
CLDN7-207ENST00000574070 PPP1R1BQ9UD71 204 aaPredicted RBP23.21■■□□□ 1.31
CLDN7-207ENST00000574070 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
CLDN7-207ENST00000574070 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
CLDN7-207ENST00000574070 BCL9O00512 1426 aa23.2■■□□□ 1.3
CLDN7-207ENST00000574070 RALBP1Q15311 655 aa23.2■■□□□ 1.3
CLDN7-207ENST00000574070 BCL11BQ9C0K0 894 aaPredicted RBP23.19■■□□□ 1.3
CLDN7-207ENST00000574070 HMOX1P09601 288 aa23.18■■□□□ 1.3
CLDN7-207ENST00000574070 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
CLDN7-207ENST00000574070 SYTL4Q96C24 671 aaPredicted RBP23.17■■□□□ 1.3
CLDN7-207ENST00000574070 NUDCQ9Y266 331 aa23.17■■□□□ 1.3
CLDN7-207ENST00000574070 SBF2Q86WG5 1849 aa23.17■■□□□ 1.3
CLDN7-207ENST00000574070 SHANK3Q9BYB0 1731 aa23.16■■□□□ 1.3
CLDN7-207ENST00000574070 KCNQ2O43526 872 aa23.16■■□□□ 1.3
CLDN7-207ENST00000574070 SPON1Q9HCB6 807 aa23.16■■□□□ 1.3
CLDN7-207ENST00000574070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
CLDN7-207ENST00000574070 COL3A1P02461 1466 aaPredicted RBP23.16■■□□□ 1.3
CLDN7-207ENST00000574070 KAT6BQ8WYB5 2073 aa23.15■■□□□ 1.3
CLDN7-207ENST00000574070 CYP27B1O15528 508 aa23.15■■□□□ 1.3
CLDN7-207ENST00000574070 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
CLDN7-207ENST00000574070 IFNL2Q8IZJ0 200 aa23.14■■□□□ 1.29
CLDN7-207ENST00000574070 PKD1L3Q7Z443 1732 aa23.13■■□□□ 1.29
CLDN7-207ENST00000574070 AMOTQ4VCS5 1084 aa23.13■■□□□ 1.29
CLDN7-207ENST00000574070 KDRP35968 1356 aa23.13■■□□□ 1.29
CLDN7-207ENST00000574070 PRIM1P49642 420 aaKnown RBP23.11■■□□□ 1.29
CLDN7-207ENST00000574070 ZNF530Q6P9A1 599 aaPredicted RBP23.11■■□□□ 1.29
CLDN7-207ENST00000574070 NHSQ6T4R5 1651 aa23.11■■□□□ 1.29
CLDN7-207ENST00000574070 PLEKHG2Q9H7P9 1386 aa23.11■■□□□ 1.29
CLDN7-207ENST00000574070 MYBBP1AQ9BQG0 1328 aaKnown RBP23.1■■□□□ 1.29
CLDN7-207ENST00000574070 U2AF1L5P0DN76 240 aaPredicted RBP23.1■■□□□ 1.29
CLDN7-207ENST00000574070 PHKG2P15735 406 aa23.1■■□□□ 1.29
CLDN7-207ENST00000574070 U2AF1Q01081 240 aaKnown RBP eCLIP23.1■■□□□ 1.29
CLDN7-207ENST00000574070 DOT1LQ8TEK3 1739 aa23.09■■□□□ 1.29
CLDN7-207ENST00000574070 C1orf141Q5JVX7 400 aa23.09■■□□□ 1.29
CLDN7-207ENST00000574070 PLSCR1O15162 318 aa23.08■■□□□ 1.29
CLDN7-207ENST00000574070 HSP90AB1P08238 724 aaKnown RBP23.07■■□□□ 1.28
CLDN7-207ENST00000574070 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
CLDN7-207ENST00000574070 NKX1-1Q15270 411 aaPredicted RBP23.06■■□□□ 1.28
CLDN7-207ENST00000574070 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
CLDN7-207ENST00000574070 RGPD3A6NKT7 1758 aaPredicted RBP23.05■■□□□ 1.28
CLDN7-207ENST00000574070 RGPD4Q7Z3J3 1758 aa23.05■■□□□ 1.28
CLDN7-207ENST00000574070 BTAF1O14981 1849 aa23.03■■□□□ 1.28
CLDN7-207ENST00000574070 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
CLDN7-207ENST00000574070 MTHFSDQ2M296 383 aaKnown RBP23.02■■□□□ 1.28
CLDN7-207ENST00000574070 TXNRD1Q16881 649 aa23.01■■□□□ 1.27
CLDN7-207ENST00000574070 AKAP4Q5JQC9 854 aa23.01■■□□□ 1.27
CLDN7-207ENST00000574070 DCAF5Q96JK2 942 aa23.01■■□□□ 1.27
CLDN7-207ENST00000574070 RSPH6AQ9H0K4 717 aa23.01■■□□□ 1.27
CLDN7-207ENST00000574070 TMOD3Q9NYL9 352 aa23.01■■□□□ 1.27
CLDN7-207ENST00000574070 ANP32CO43423 234 aa23■■□□□ 1.27
CLDN7-207ENST00000574070 NEFMP07197 916 aa23■■□□□ 1.27
CLDN7-207ENST00000574070 FCHSD2O94868 740 aa22.99■■□□□ 1.27
CLDN7-207ENST00000574070 GAS2L2Q8NHY3 880 aa22.99■■□□□ 1.27
CLDN7-207ENST00000574070 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
CLDN7-207ENST00000574070 CABP4P57796 275 aa22.97■■□□□ 1.27
CLDN7-207ENST00000574070 PROM2Q8N271 834 aa22.97■■□□□ 1.27
CLDN7-207ENST00000574070 PIGBQ92521 554 aa22.97■■□□□ 1.27
CLDN7-207ENST00000574070 CASZ1Q86V15 1759 aa22.96■■□□□ 1.27
CLDN7-207ENST00000574070 ERVV-2B6SEH9 535 aa22.96■■□□□ 1.27
CLDN7-207ENST00000574070 ITGB4P16144 1822 aa22.96■■□□□ 1.27
CLDN7-207ENST00000574070 KDM6AO15550 1401 aaPredicted RBP22.95■■□□□ 1.26
CLDN7-207ENST00000574070 PHACTR3Q96KR7 559 aa22.95■■□□□ 1.26
CLDN7-207ENST00000574070 PNNQ9H307 717 aaKnown RBP22.95■■□□□ 1.26
CLDN7-207ENST00000574070 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
CLDN7-207ENST00000574070 SMARCC1Q92922 1105 aaPredicted RBP22.94■■□□□ 1.26
CLDN7-207ENST00000574070 CHD4Q14839 1912 aa22.93■■□□□ 1.26
CLDN7-207ENST00000574070 CCNL1Q9UK58 526 aaPredicted RBP22.93■■□□□ 1.26
CLDN7-207ENST00000574070 PALLDQ8WX93 1383 aa22.92■■□□□ 1.26
CLDN7-207ENST00000574070 GNAT3A8MTJ3 354 aa22.92■■□□□ 1.26
CLDN7-207ENST00000574070 SLC27A3Q5K4L6 730 aa22.92■■□□□ 1.26
CLDN7-207ENST00000574070 LGR6Q9HBX8 967 aa22.92■■□□□ 1.26
CLDN7-207ENST00000574070 MAP3K5Q99683 1374 aa22.91■■□□□ 1.26
CLDN7-207ENST00000574070 MAPK8IP3Q9UPT6 1336 aa22.91■■□□□ 1.26
CLDN7-207ENST00000574070 RNMTO43148 476 aaKnown RBP22.91■■□□□ 1.26
CLDN7-207ENST00000574070 ANO8Q9HCE9 1232 aaPredicted RBP22.91■■□□□ 1.26
CLDN7-207ENST00000574070 STK32BQ9NY57 414 aa22.91■■□□□ 1.26
CLDN7-207ENST00000574070 KCNQ4P56696 695 aa22.9■■□□□ 1.26
CLDN7-207ENST00000574070 NFATC2IPQ8NCF5 419 aa22.9■■□□□ 1.26
CLDN7-207ENST00000574070 RTF1Q92541 710 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms