RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
PRPF8-207ENST00000573681 VAMP4O75379 141 aa16.56■□□□□ 0.24
PRPF8-207ENST00000573681 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
PRPF8-207ENST00000573681 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
PRPF8-207ENST00000573681 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
PRPF8-207ENST00000573681 CRBNQ96SW2 442 aa16.56■□□□□ 0.24
PRPF8-207ENST00000573681 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
PRPF8-207ENST00000573681 CRB1P82279 1406 aa16.55■□□□□ 0.24
PRPF8-207ENST00000573681 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
PRPF8-207ENST00000573681 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
PRPF8-207ENST00000573681 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
PRPF8-207ENST00000573681 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
PRPF8-207ENST00000573681 PRDM11Q9NQV5 511 aa16.55■□□□□ 0.24
PRPF8-207ENST00000573681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■□□□□ 8.1
PRPF8-207ENST00000573681 AAMPQ13685 434 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
PRPF8-207ENST00000573681 CHRNA2Q15822 529 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 IL17REQ8NFR9 667 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
PRPF8-207ENST00000573681 SMC4Q9NTJ3 1288 aa16.54■□□□□ 0.24
PRPF8-207ENST00000573681 TATP17735 454 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-207ENST00000573681 TWISTNBQ3B726 338 aaPredicted RBP16.53■□□□□ 0.24
PRPF8-207ENST00000573681 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
PRPF8-207ENST00000573681 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.24
PRPF8-207ENST00000573681 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
PRPF8-207ENST00000573681 SPG7Q9UQ90 795 aa16.52■□□□□ 0.24
PRPF8-207ENST00000573681 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
PRPF8-207ENST00000573681 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
PRPF8-207ENST00000573681 NHSL1Q5SYE7 1610 aa16.51■□□□□ 0.23
PRPF8-207ENST00000573681 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
PRPF8-207ENST00000573681 KIF16BQ96L93 1317 aa16.5■□□□□ 0.23
PRPF8-207ENST00000573681 EVA1CP58658 441 aa16.5■□□□□ 0.23
PRPF8-207ENST00000573681 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
PRPF8-207ENST00000573681 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
PRPF8-207ENST00000573681 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
PRPF8-207ENST00000573681 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
PRPF8-207ENST00000573681 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
PRPF8-207ENST00000573681 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
PRPF8-207ENST00000573681 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
PRPF8-207ENST00000573681 ATF7IPQ6VMQ6 1270 aa16.48■□□□□ 0.23
PRPF8-207ENST00000573681 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
PRPF8-207ENST00000573681 COL18A1P39060 1754 aa16.48■□□□□ 0.23
PRPF8-207ENST00000573681 CEMIPQ8WUJ3 1361 aa16.48■□□□□ 0.23
PRPF8-207ENST00000573681 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
PRPF8-207ENST00000573681 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
PRPF8-207ENST00000573681 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
PRPF8-207ENST00000573681 PANK1Q8TE04 598 aa16.47■□□□□ 0.23
PRPF8-207ENST00000573681 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
PRPF8-207ENST00000573681 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
PRPF8-207ENST00000573681 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
PRPF8-207ENST00000573681 CRYBG1Q9Y4K1 1723 aa16.46■□□□□ 0.23
PRPF8-207ENST00000573681 TEFQ10587 303 aa16.46■□□□□ 0.23
PRPF8-207ENST00000573681 FTSJ3Q8IY81 847 aaKnown RBP16.46■□□□□ 0.23
PRPF8-207ENST00000573681 LGR6Q9HBX8 967 aa16.46■□□□□ 0.23
PRPF8-207ENST00000573681 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
PRPF8-207ENST00000573681 IFNL2Q8IZJ0 200 aa16.45■□□□□ 0.22
PRPF8-207ENST00000573681 CAMTA1Q9Y6Y1 1673 aa16.45■□□□□ 0.22
PRPF8-207ENST00000573681 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
PRPF8-207ENST00000573681 LMO7Q8WWI1 1683 aa16.44■□□□□ 0.22
PRPF8-207ENST00000573681 MPRIPQ6WCQ1 1025 aa16.44■□□□□ 0.22
PRPF8-207ENST00000573681 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
PRPF8-207ENST00000573681 CHMP4BQ9H444 224 aaKnown RBP16.44■□□□□ 0.22
PRPF8-207ENST00000573681 COG6Q9Y2V7 657 aa16.44■□□□□ 0.22
PRPF8-207ENST00000573681 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
PRPF8-207ENST00000573681 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
PRPF8-207ENST00000573681 TRIM27P14373 513 aa16.43■□□□□ 0.22
PRPF8-207ENST00000573681 PHKG2P15735 406 aa16.42■□□□□ 0.22
PRPF8-207ENST00000573681 PIP4K2BP78356 416 aa16.42■□□□□ 0.22
PRPF8-207ENST00000573681 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
PRPF8-207ENST00000573681 DDX19BQ9UMR2 479 aa16.42■□□□□ 0.22
PRPF8-207ENST00000573681 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
PRPF8-207ENST00000573681 RLBP1P12271 317 aa16.41■□□□□ 0.22
PRPF8-207ENST00000573681 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
PRPF8-207ENST00000573681 CLUAP1Q96AJ1 413 aa16.41■□□□□ 0.22
PRPF8-207ENST00000573681 COL5A2P05997 1499 aaPredicted RBP16.41■□□□□ 0.22
PRPF8-207ENST00000573681 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
PRPF8-207ENST00000573681 HOXB7P09629 217 aa16.4■□□□□ 0.22
PRPF8-207ENST00000573681 IL2RBP14784 551 aa16.4■□□□□ 0.22
PRPF8-207ENST00000573681 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
PRPF8-207ENST00000573681 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
PRPF8-207ENST00000573681 LARP1Q6PKG0 1096 aaKnown RBP16.4■□□□□ 0.22
PRPF8-207ENST00000573681 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
PRPF8-207ENST00000573681 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
PRPF8-207ENST00000573681 BTG4Q9NY30 223 aa16.4■□□□□ 0.22
PRPF8-207ENST00000573681 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
PRPF8-207ENST00000573681 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
PRPF8-207ENST00000573681 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
PRPF8-207ENST00000573681 TNNQ9UQP3 1299 aa16.39■□□□□ 0.21
PRPF8-207ENST00000573681 PTPRCP08575 1304 aa16.39■□□□□ 0.21
PRPF8-207ENST00000573681 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
PRPF8-207ENST00000573681 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
PRPF8-207ENST00000573681 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
PRPF8-207ENST00000573681 MEGF6O75095 1541 aa16.37■□□□□ 0.21
PRPF8-207ENST00000573681 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
PRPF8-207ENST00000573681 TMEM57Q8N5G2 664 aa16.37■□□□□ 0.21
PRPF8-207ENST00000573681 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms