RNA–Protein interactions for RNA: ENST00000573377.1

ITGB3-203, Transcript of integrin subunit beta 3, humanhuman

TSL 1 (best)

Gene ITGB3, Length 408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-203ENST00000573377 LY75O60449 1722 aa18.49■□□□□ 0.55
ITGB3-203ENST00000573377 ZNF827Q17R98 1081 aa18.49■□□□□ 0.55
ITGB3-203ENST00000573377 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
ITGB3-203ENST00000573377 SHANK3Q9BYB0 1731 aa18.49■□□□□ 0.55
ITGB3-203ENST00000573377 FYB1O15117 783 aa18.48■□□□□ 0.55
ITGB3-203ENST00000573377 USP47Q96K76 1375 aa18.47■□□□□ 0.55
ITGB3-203ENST00000573377 MEGF6O75095 1541 aa18.47■□□□□ 0.55
ITGB3-203ENST00000573377 RGPD2P0DJD1 1756 aa18.47■□□□□ 0.55
ITGB3-203ENST00000573377 NSD2O96028 1365 aa18.46■□□□□ 0.55
ITGB3-203ENST00000573377 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
ITGB3-203ENST00000573377 CHD4Q14839 1912 aa18.46■□□□□ 0.55
ITGB3-203ENST00000573377 UTRNP46939 3433 aa18.45■□□□□ 0.54
ITGB3-203ENST00000573377 INSRP06213 1382 aa18.45■□□□□ 0.54
ITGB3-203ENST00000573377 POLD1P28340 1107 aa18.45■□□□□ 0.54
ITGB3-203ENST00000573377 KIF20BQ96Q89 1820 aa18.44■□□□□ 0.54
ITGB3-203ENST00000573377 FLT4P35916 1363 aa18.44■□□□□ 0.54
ITGB3-203ENST00000573377 NBPF6Q5VWK0 638 aa18.44■□□□□ 0.54
ITGB3-203ENST00000573377 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
ITGB3-203ENST00000573377 SYTL4Q96C24 671 aaPredicted RBP18.44■□□□□ 0.54
ITGB3-203ENST00000573377 NBPF4Q96M43 638 aa18.44■□□□□ 0.54
ITGB3-203ENST00000573377 TIMELESSQ9UNS1 1208 aa18.44■□□□□ 0.54
ITGB3-203ENST00000573377 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
ITGB3-203ENST00000573377 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
ITGB3-203ENST00000573377 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
ITGB3-203ENST00000573377 PNPLA7Q6ZV29 1317 aa18.43■□□□□ 0.54
ITGB3-203ENST00000573377 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
ITGB3-203ENST00000573377 TATP17735 454 aaPredicted RBP18.41■□□□□ 0.54
ITGB3-203ENST00000573377 FBLN1P23142 703 aa18.41■□□□□ 0.54
ITGB3-203ENST00000573377 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
ITGB3-203ENST00000573377 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
ITGB3-203ENST00000573377 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
ITGB3-203ENST00000573377 CCNL1Q9UK58 526 aaPredicted RBP18.4■□□□□ 0.54
ITGB3-203ENST00000573377 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
ITGB3-203ENST00000573377 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
ITGB3-203ENST00000573377 HSP90AB2PQ58FF8 381 aa18.37■□□□□ 0.53
ITGB3-203ENST00000573377 FLAD1Q8NFF5 587 aa18.36■□□□□ 0.53
ITGB3-203ENST00000573377 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
ITGB3-203ENST00000573377 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
ITGB3-203ENST00000573377 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
ITGB3-203ENST00000573377 PLEKHG2Q9H7P9 1386 aa18.35■□□□□ 0.53
ITGB3-203ENST00000573377 GPR162Q16538 588 aa18.35■□□□□ 0.53
ITGB3-203ENST00000573377 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
ITGB3-203ENST00000573377 C5P01031 1676 aa18.34■□□□□ 0.53
ITGB3-203ENST00000573377 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
ITGB3-203ENST00000573377 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
ITGB3-203ENST00000573377 NSD3Q9BZ95 1437 aa18.33■□□□□ 0.53
ITGB3-203ENST00000573377 KCNQ4P56696 695 aa18.33■□□□□ 0.52
ITGB3-203ENST00000573377 NKX1-1Q15270 411 aaPredicted RBP18.33■□□□□ 0.52
ITGB3-203ENST00000573377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.33■□□□□ 0.52
ITGB3-203ENST00000573377 TAF1LQ8IZX4 1826 aa18.33■□□□□ 0.52
ITGB3-203ENST00000573377 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
ITGB3-203ENST00000573377 WASHC2AQ641Q2 1341 aa18.32■□□□□ 0.52
ITGB3-203ENST00000573377 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
ITGB3-203ENST00000573377 CYP27B1O15528 508 aa18.31■□□□□ 0.52
ITGB3-203ENST00000573377 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
ITGB3-203ENST00000573377 GOLGB1Q14789 3259 aaKnown RBP18.31■□□□□ 0.52
ITGB3-203ENST00000573377 ITGB4P16144 1822 aa18.3■□□□□ 0.52
ITGB3-203ENST00000573377 GRIN3BO60391 1043 aa18.3■□□□□ 0.52
ITGB3-203ENST00000573377 EMILIN1Q9Y6C2 1016 aa18.3■□□□□ 0.52
ITGB3-203ENST00000573377 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
ITGB3-203ENST00000573377 MAP2P11137 1827 aaKnown RBP18.28■□□□□ 0.52
ITGB3-203ENST00000573377 MSH5O43196 834 aa18.28■□□□□ 0.52
ITGB3-203ENST00000573377 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
ITGB3-203ENST00000573377 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
ITGB3-203ENST00000573377 CD2APQ9Y5K6 639 aa18.28■□□□□ 0.52
ITGB3-203ENST00000573377 C4BP0C0L5 1744 aa18.27■□□□□ 0.52
ITGB3-203ENST00000573377 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
ITGB3-203ENST00000573377 AK7Q96M32 723 aa18.25■□□□□ 0.51
ITGB3-203ENST00000573377 EYA1Q99502 592 aa18.25■□□□□ 0.51
ITGB3-203ENST00000573377 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
ITGB3-203ENST00000573377 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
ITGB3-203ENST00000573377 PIGBQ92521 554 aa18.24■□□□□ 0.51
ITGB3-203ENST00000573377 POLKQ9UBT6 870 aa18.24■□□□□ 0.51
ITGB3-203ENST00000573377 UBR3Q6ZT12 1888 aa18.24■□□□□ 0.51
ITGB3-203ENST00000573377 SSFA2P28290 1259 aa18.23■□□□□ 0.51
ITGB3-203ENST00000573377 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
ITGB3-203ENST00000573377 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
ITGB3-203ENST00000573377 TMOD3Q9NYL9 352 aa18.22■□□□□ 0.51
ITGB3-203ENST00000573377 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
ITGB3-203ENST00000573377 SIK1P57059 783 aa18.21■□□□□ 0.51
ITGB3-203ENST00000573377 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
ITGB3-203ENST00000573377 PHKG2P15735 406 aa18.2■□□□□ 0.5
ITGB3-203ENST00000573377 YBX3P16989 372 aaKnown RBP eCLIP18.2■□□□□ 0.5
ITGB3-203ENST00000573377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
ITGB3-203ENST00000573377 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
ITGB3-203ENST00000573377 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
ITGB3-203ENST00000573377 HSP90AB1P08238 724 aaKnown RBP18.18■□□□□ 0.5
ITGB3-203ENST00000573377 EIF4A2Q14240 407 aaKnown RBP18.18■□□□□ 0.5
ITGB3-203ENST00000573377 IGSF1Q8N6C5 1336 aa18.18■□□□□ 0.5
ITGB3-203ENST00000573377 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
ITGB3-203ENST00000573377 EIF4G2P78344 907 aaKnown RBP eCLIP18.17■□□□□ 0.5
ITGB3-203ENST00000573377 LINC00116Q8NCU8 138 aa18.16■□□□□ 0.5
ITGB3-203ENST00000573377 ASAP1Q9ULH1 1129 aa18.15■□□□□ 0.5
ITGB3-203ENST00000573377 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
ITGB3-203ENST00000573377 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
ITGB3-203ENST00000573377 AMOTQ4VCS5 1084 aa18.14■□□□□ 0.49
ITGB3-203ENST00000573377 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.49
ITGB3-203ENST00000573377 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
ITGB3-203ENST00000573377 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
ITGB3-203ENST00000573377 KDRP35968 1356 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms