RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
NDE1-206ENST00000572967 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
NDE1-206ENST00000572967 TXNRD1Q16881 649 aa16.24■□□□□ 0.19
NDE1-206ENST00000572967 EMILIN1Q9Y6C2 1016 aa16.24■□□□□ 0.19
NDE1-206ENST00000572967 INSRP06213 1382 aa16.24■□□□□ 0.19
NDE1-206ENST00000572967 QSER1Q2KHR3 1735 aa16.23■□□□□ 0.19
NDE1-206ENST00000572967 PROM2Q8N271 834 aa16.23■□□□□ 0.19
NDE1-206ENST00000572967 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
NDE1-206ENST00000572967 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
NDE1-206ENST00000572967 HSP90AB2PQ58FF8 381 aa16.22■□□□□ 0.19
NDE1-206ENST00000572967 NBPF6Q5VWK0 638 aa16.22■□□□□ 0.19
NDE1-206ENST00000572967 NBPF4Q96M43 638 aa16.22■□□□□ 0.19
NDE1-206ENST00000572967 KIF24Q5T7B8 1368 aa16.22■□□□□ 0.19
NDE1-206ENST00000572967 ITGB4P16144 1822 aa16.22■□□□□ 0.19
NDE1-206ENST00000572967 NSD2O96028 1365 aa16.21■□□□□ 0.19
NDE1-206ENST00000572967 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
NDE1-206ENST00000572967 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
NDE1-206ENST00000572967 PDGFDQ9GZP0 370 aaPredicted RBP16.2■□□□□ 0.18
NDE1-206ENST00000572967 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
NDE1-206ENST00000572967 C5P01031 1676 aa16.2■□□□□ 0.18
NDE1-206ENST00000572967 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
NDE1-206ENST00000572967 SPON1Q9HCB6 807 aa16.19■□□□□ 0.18
NDE1-206ENST00000572967 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
NDE1-206ENST00000572967 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
NDE1-206ENST00000572967 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
NDE1-206ENST00000572967 PPP1R1BQ9UD71 204 aaPredicted RBP16.18■□□□□ 0.18
NDE1-206ENST00000572967 ZBTB7AO95365 584 aa16.17■□□□□ 0.18
NDE1-206ENST00000572967 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
NDE1-206ENST00000572967 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
NDE1-206ENST00000572967 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
NDE1-206ENST00000572967 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
NDE1-206ENST00000572967 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
NDE1-206ENST00000572967 SLC15A2Q16348 729 aa16.16■□□□□ 0.18
NDE1-206ENST00000572967 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
NDE1-206ENST00000572967 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
NDE1-206ENST00000572967 LRRC4BQ9NT99 713 aa16.14■□□□□ 0.17
NDE1-206ENST00000572967 KCNQ4P56696 695 aa16.13■□□□□ 0.17
NDE1-206ENST00000572967 PANK3Q9H999 370 aa16.13■□□□□ 0.17
NDE1-206ENST00000572967 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
NDE1-206ENST00000572967 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
NDE1-206ENST00000572967 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
NDE1-206ENST00000572967 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
NDE1-206ENST00000572967 CYP27B1O15528 508 aa16.09■□□□□ 0.17
NDE1-206ENST00000572967 PTGER2P43116 358 aa16.09■□□□□ 0.17
NDE1-206ENST00000572967 SLC27A3Q5K4L6 730 aa16.09■□□□□ 0.17
NDE1-206ENST00000572967 EYA1Q99502 592 aa16.09■□□□□ 0.17
NDE1-206ENST00000572967 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
NDE1-206ENST00000572967 EIF4A2Q14240 407 aaKnown RBP16.08■□□□□ 0.16
NDE1-206ENST00000572967 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
NDE1-206ENST00000572967 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
NDE1-206ENST00000572967 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
NDE1-206ENST00000572967 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
NDE1-206ENST00000572967 KNSTRNQ9Y448 316 aa16.07■□□□□ 0.16
NDE1-206ENST00000572967 UBR3Q6ZT12 1888 aa16.06■□□□□ 0.16
NDE1-206ENST00000572967 VIRMAQ69YN4 1812 aaKnown RBP16.06■□□□□ 0.16
NDE1-206ENST00000572967 PNPLA7Q6ZV29 1317 aa16.06■□□□□ 0.16
NDE1-206ENST00000572967 IGSF1Q8N6C5 1336 aa16.05■□□□□ 0.16
NDE1-206ENST00000572967 MPRIPQ6WCQ1 1025 aa16.05■□□□□ 0.16
NDE1-206ENST00000572967 MORC1Q86VD1 984 aa16.04■□□□□ 0.16
NDE1-206ENST00000572967 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
NDE1-206ENST00000572967 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
NDE1-206ENST00000572967 SGIP1Q9BQI5 828 aa16.03■□□□□ 0.16
NDE1-206ENST00000572967 FHDC1Q9C0D6 1143 aaPredicted RBP16.03■□□□□ 0.16
NDE1-206ENST00000572967 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
NDE1-206ENST00000572967 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
NDE1-206ENST00000572967 SCN11AQ9UI33 1791 aa16■□□□□ 0.15
NDE1-206ENST00000572967 PHKG2P15735 406 aa16■□□□□ 0.15
NDE1-206ENST00000572967 KLHL34Q8N239 644 aa16■□□□□ 0.15
NDE1-206ENST00000572967 KDM6AO15550 1401 aaPredicted RBP16■□□□□ 0.15
NDE1-206ENST00000572967 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
NDE1-206ENST00000572967 MSH5O43196 834 aa15.99■□□□□ 0.15
NDE1-206ENST00000572967 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
NDE1-206ENST00000572967 DIEXFQ68CQ4 756 aaKnown RBP15.99■□□□□ 0.15
NDE1-206ENST00000572967 AEBP1Q8IUX7 1158 aa15.99■□□□□ 0.15
NDE1-206ENST00000572967 PIGBQ92521 554 aa15.99■□□□□ 0.15
NDE1-206ENST00000572967 NKX1-1Q15270 411 aaPredicted RBP15.98■□□□□ 0.15
NDE1-206ENST00000572967 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
NDE1-206ENST00000572967 ARXQ96QS3 562 aa15.98■□□□□ 0.15
NDE1-206ENST00000572967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
NDE1-206ENST00000572967 TMOD3Q9NYL9 352 aa15.98■□□□□ 0.15
NDE1-206ENST00000572967 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
NDE1-206ENST00000572967 ANP32CO43423 234 aa15.97■□□□□ 0.15
NDE1-206ENST00000572967 MSL1Q68DK7 614 aa15.97■□□□□ 0.15
NDE1-206ENST00000572967 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
NDE1-206ENST00000572967 SYT17Q9BSW7 474 aa15.97■□□□□ 0.15
NDE1-206ENST00000572967 ZNF831Q5JPB2 1677 aa15.97■□□□□ 0.15
NDE1-206ENST00000572967 C4AP0C0L4 1744 aa15.97■□□□□ 0.15
NDE1-206ENST00000572967 CHD4Q14839 1912 aa15.96■□□□□ 0.15
NDE1-206ENST00000572967 POLD1P28340 1107 aa15.96■□□□□ 0.15
NDE1-206ENST00000572967 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.15
NDE1-206ENST00000572967 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
NDE1-206ENST00000572967 ZNF530Q6P9A1 599 aaPredicted RBP15.96■□□□□ 0.15
NDE1-206ENST00000572967 MAP3K5Q99683 1374 aa15.96■□□□□ 0.15
NDE1-206ENST00000572967 TJP1Q07157 1748 aa15.96■□□□□ 0.15
NDE1-206ENST00000572967 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
NDE1-206ENST00000572967 YY1P25490 414 aa15.95■□□□□ 0.14
NDE1-206ENST00000572967 COL23A1Q86Y22 540 aaPredicted RBP15.95■□□□□ 0.14
NDE1-206ENST00000572967 SLC16A10Q8TF71 515 aa15.95■□□□□ 0.14
NDE1-206ENST00000572967 AK7Q96M32 723 aa15.95■□□□□ 0.14
NDE1-206ENST00000572967 KDRP35968 1356 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms