RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 CAMTA1Q9Y6Y1 1673 aa26.47■■□□□ 1.83
CHRNE-202ENST00000572438 CERKQ8TCT0 537 aa26.47■■□□□ 1.83
CHRNE-202ENST00000572438 GNAT3A8MTJ3 354 aa26.46■■□□□ 1.83
CHRNE-202ENST00000572438 CHL1O00533 1208 aa26.46■■□□□ 1.83
CHRNE-202ENST00000572438 SMC4Q9NTJ3 1288 aa26.46■■□□□ 1.83
CHRNE-202ENST00000572438 SSH1Q8WYL5 1049 aa26.46■■□□□ 1.83
CHRNE-202ENST00000572438 MAP3K5Q99683 1374 aa26.46■■□□□ 1.83
CHRNE-202ENST00000572438 RGPD2P0DJD1 1756 aa26.46■■□□□ 1.83
CHRNE-202ENST00000572438 COL18A1P39060 1754 aa26.45■■□□□ 1.83
CHRNE-202ENST00000572438 KIAA0232Q92628 1395 aa26.45■■□□□ 1.82
CHRNE-202ENST00000572438 ALDH1L2Q3SY69 923 aa26.45■■□□□ 1.82
CHRNE-202ENST00000572438 VAMP4O75379 141 aa26.43■■□□□ 1.82
CHRNE-202ENST00000572438 RGPD5Q99666 1765 aa26.42■■□□□ 1.82
CHRNE-202ENST00000572438 LMO7Q8WWI1 1683 aa26.42■■□□□ 1.82
CHRNE-202ENST00000572438 TSPYL6Q8N831 410 aa26.42■■□□□ 1.82
CHRNE-202ENST00000572438 CHRNA2Q15822 529 aa26.41■■□□□ 1.82
CHRNE-202ENST00000572438 ZKSCAN2Q63HK3 967 aa26.41■■□□□ 1.82
CHRNE-202ENST00000572438 LRRC37A3O60309 1634 aa26.4■■□□□ 1.82
CHRNE-202ENST00000572438 AMOTQ4VCS5 1084 aa26.4■■□□□ 1.82
CHRNE-202ENST00000572438 PLEKHO1Q53GL0 409 aaPredicted RBP26.4■■□□□ 1.82
CHRNE-202ENST00000572438 TWISTNBQ3B726 338 aaPredicted RBP26.39■■□□□ 1.82
CHRNE-202ENST00000572438 C8orf58Q8NAV2 365 aa26.39■■□□□ 1.82
CHRNE-202ENST00000572438 PANK1Q8TE04 598 aa26.39■■□□□ 1.82
CHRNE-202ENST00000572438 BRPF1P55201 1214 aaPredicted RBP26.37■■□□□ 1.81
CHRNE-202ENST00000572438 IL17REQ8NFR9 667 aa26.37■■□□□ 1.81
CHRNE-202ENST00000572438 NLRP2Q9NX02 1062 aa26.37■■□□□ 1.81
CHRNE-202ENST00000572438 KIF16BQ96L93 1317 aa26.37■■□□□ 1.81
CHRNE-202ENST00000572438 MS4A1P11836 297 aa26.37■■□□□ 1.81
CHRNE-202ENST00000572438 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
CHRNE-202ENST00000572438 HAP1P54257 671 aaPredicted RBP26.36■■□□□ 1.81
CHRNE-202ENST00000572438 PRDM11Q9NQV5 511 aa26.36■■□□□ 1.81
CHRNE-202ENST00000572438 ROBO1Q9Y6N7 1651 aa26.36■■□□□ 1.81
CHRNE-202ENST00000572438 CSB-PGBD3P0DP91 1061 aa26.35■■□□□ 1.81
CHRNE-202ENST00000572438 ZNF530Q6P9A1 599 aaPredicted RBP26.35■■□□□ 1.81
CHRNE-202ENST00000572438 TSPYL4Q9UJ04 414 aa26.35■■□□□ 1.81
CHRNE-202ENST00000572438 TNNQ9UQP3 1299 aa26.35■■□□□ 1.81
CHRNE-202ENST00000572438 COG6Q9Y2V7 657 aa26.35■■□□□ 1.81
CHRNE-202ENST00000572438 ABCA3Q99758 1704 aa26.35■■□□□ 1.81
CHRNE-202ENST00000572438 RLBP1P12271 317 aa26.35■■□□□ 1.81
CHRNE-202ENST00000572438 AKAP4Q5JQC9 854 aa26.35■■□□□ 1.81
CHRNE-202ENST00000572438 NOB1Q9ULX3 412 aaKnown RBP26.35■■□□□ 1.81
CHRNE-202ENST00000572438 FAM208AQ9UK61 1670 aaKnown RBP26.35■■□□□ 1.81
CHRNE-202ENST00000572438 CEMIPQ8WUJ3 1361 aa26.33■■□□□ 1.81
CHRNE-202ENST00000572438 IPO8O15397 1037 aaKnown RBP26.33■■□□□ 1.81
CHRNE-202ENST00000572438 ATF7IPQ6VMQ6 1270 aa26.33■■□□□ 1.81
CHRNE-202ENST00000572438 BABAM1Q9NWV8 329 aa26.33■■□□□ 1.81
CHRNE-202ENST00000572438 MIS18AQ9NYP9 233 aa26.33■■□□□ 1.81
CHRNE-202ENST00000572438 AHDC1Q5TGY3 1603 aaPredicted RBP26.33■■□□□ 1.81
CHRNE-202ENST00000572438 DZIP1LQ8IYY4 767 aaKnown RBP26.32■■□□□ 1.8
CHRNE-202ENST00000572438 MRPL50Q8N5N7 158 aaKnown RBP26.32■■□□□ 1.8
CHRNE-202ENST00000572438 TRIM27P14373 513 aa26.32■■□□□ 1.8
CHRNE-202ENST00000572438 FTSJ3Q8IY81 847 aaKnown RBP26.32■■□□□ 1.8
CHRNE-202ENST00000572438 RAPGEF4Q8WZA2 1011 aa26.32■■□□□ 1.8
CHRNE-202ENST00000572438 CLUAP1Q96AJ1 413 aa26.32■■□□□ 1.8
CHRNE-202ENST00000572438 UBAP1LF5GYI3 381 aa26.3■■□□□ 1.8
CHRNE-202ENST00000572438 TAF7Q15545 349 aaPredicted RBP26.3■■□□□ 1.8
CHRNE-202ENST00000572438 C1orf141Q5JVX7 400 aa26.3■■□□□ 1.8
CHRNE-202ENST00000572438 KRT24Q2M2I5 525 aa26.3■■□□□ 1.8
CHRNE-202ENST00000572438 PLEKHG2Q9H7P9 1386 aa26.3■■□□□ 1.8
CHRNE-202ENST00000572438 TOM1O60784 492 aa26.29■■□□□ 1.8
CHRNE-202ENST00000572438 AAMPQ13685 434 aa26.29■■□□□ 1.8
CHRNE-202ENST00000572438 TATP17735 454 aaPredicted RBP26.28■■□□□ 1.8
CHRNE-202ENST00000572438 MVPQ14764 893 aaKnown RBP26.28■■□□□ 1.8
CHRNE-202ENST00000572438 ARHGAP45Q92619 1136 aa26.27■■□□□ 1.8
CHRNE-202ENST00000572438 LGR6Q9HBX8 967 aa26.27■■□□□ 1.8
CHRNE-202ENST00000572438 WDR17Q8IZU2 1322 aa26.27■■□□□ 1.8
CHRNE-202ENST00000572438 PIP4K2BP78356 416 aa26.26■■□□□ 1.79
CHRNE-202ENST00000572438 OVOS2A0A0G2JMS6 1433 aa26.26■■□□□ 1.79
CHRNE-202ENST00000572438 MEGF6O75095 1541 aa26.26■■□□□ 1.79
CHRNE-202ENST00000572438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.25■■□□□ 1.79
CHRNE-202ENST00000572438 COL5A2P05997 1499 aaPredicted RBP26.25■■□□□ 1.79
CHRNE-202ENST00000572438 TCERG1O14776 1098 aaKnown RBP26.24■■□□□ 1.79
CHRNE-202ENST00000572438 MPRIPQ6WCQ1 1025 aa26.24■■□□□ 1.79
CHRNE-202ENST00000572438 RNMTO43148 476 aaKnown RBP26.23■■□□□ 1.79
CHRNE-202ENST00000572438 SPG7Q9UQ90 795 aa26.23■■□□□ 1.79
CHRNE-202ENST00000572438 KDM2BQ8NHM5 1336 aa26.23■■□□□ 1.79
CHRNE-202ENST00000572438 TEFQ10587 303 aa26.21■■□□□ 1.79
CHRNE-202ENST00000572438 SOS1Q07889 1333 aaPredicted RBP26.21■■□□□ 1.79
CHRNE-202ENST00000572438 TOM1L2Q6ZVM7 507 aa26.21■■□□□ 1.79
CHRNE-202ENST00000572438 CENPQQ7L2Z9 268 aaPredicted RBP26.21■■□□□ 1.79
CHRNE-202ENST00000572438 COL22A1Q8NFW1 1626 aaPredicted RBP26.2■■□□□ 1.79
CHRNE-202ENST00000572438 TMEM57Q8N5G2 664 aa26.2■■□□□ 1.78
CHRNE-202ENST00000572438 DDX19BQ9UMR2 479 aa26.2■■□□□ 1.78
CHRNE-202ENST00000572438 ITPRIPQ8IWB1 547 aa26.19■■□□□ 1.78
CHRNE-202ENST00000572438 ADAMTS7Q9UKP4 1686 aa26.18■■□□□ 1.78
CHRNE-202ENST00000572438 API5Q9BZZ5 524 aaKnown RBP26.18■■□□□ 1.78
CHRNE-202ENST00000572438 PHKG2P15735 406 aa26.17■■□□□ 1.78
CHRNE-202ENST00000572438 TSHZ2Q9NRE2 1034 aa26.17■■□□□ 1.78
CHRNE-202ENST00000572438 CARD10Q9BWT7 1032 aa26.16■■□□□ 1.78
CHRNE-202ENST00000572438 ABCC4O15439 1325 aa26.16■■□□□ 1.78
CHRNE-202ENST00000572438 IFNL2Q8IZJ0 200 aa26.16■■□□□ 1.78
CHRNE-202ENST00000572438 BTBD11A6QL63 1104 aa26.15■■□□□ 1.78
CHRNE-202ENST00000572438 EVA1CP58658 441 aa26.15■■□□□ 1.78
CHRNE-202ENST00000572438 PKD1L3Q7Z443 1732 aa26.15■■□□□ 1.78
CHRNE-202ENST00000572438 STRN4Q9NRL3 753 aa26.14■■□□□ 1.78
CHRNE-202ENST00000572438 COL16A1Q07092 1604 aaPredicted RBP26.14■■□□□ 1.78
CHRNE-202ENST00000572438 KDM3BQ7LBC6 1761 aa26.14■■□□□ 1.78
CHRNE-202ENST00000572438 LARP1Q6PKG0 1096 aaKnown RBP26.14■■□□□ 1.77
CHRNE-202ENST00000572438 PHLPP1O60346 1717 aa26.13■■□□□ 1.77
CHRNE-202ENST00000572438 EIF4A1P60842 406 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms