RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ZKSCAN2Q63HK3 967 aa24.96■■□□□ 1.59
RPAIN-210ENST00000571613 MCM10Q7L590 875 aa24.96■■□□□ 1.59
RPAIN-210ENST00000571613 MAP3K5Q99683 1374 aa24.96■■□□□ 1.59
RPAIN-210ENST00000571613 PLEKHO1Q53GL0 409 aaPredicted RBP24.95■■□□□ 1.58
RPAIN-210ENST00000571613 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.58
RPAIN-210ENST00000571613 AXIN2Q9Y2T1 843 aa24.95■■□□□ 1.58
RPAIN-210ENST00000571613 CRB1P82279 1406 aa24.95■■□□□ 1.58
RPAIN-210ENST00000571613 SSH1Q8WYL5 1049 aa24.94■■□□□ 1.58
RPAIN-210ENST00000571613 PLEKHG2Q9H7P9 1386 aa24.94■■□□□ 1.58
RPAIN-210ENST00000571613 USHBP1Q8N6Y0 703 aa24.94■■□□□ 1.58
RPAIN-210ENST00000571613 CAMTA1Q9Y6Y1 1673 aa24.93■■□□□ 1.58
RPAIN-210ENST00000571613 KIAA0232Q92628 1395 aa24.93■■□□□ 1.58
RPAIN-210ENST00000571613 CRYBG1Q9Y4K1 1723 aa24.93■■□□□ 1.58
RPAIN-210ENST00000571613 VAMP4O75379 141 aa24.93■■□□□ 1.58
RPAIN-210ENST00000571613 LRRC59Q96AG4 307 aaKnown RBP24.93■■□□□ 1.58
RPAIN-210ENST00000571613 NHSL1Q5SYE7 1610 aa24.93■■□□□ 1.58
RPAIN-210ENST00000571613 TWISTNBQ3B726 338 aaPredicted RBP24.92■■□□□ 1.58
RPAIN-210ENST00000571613 CABLES1Q8TDN4 633 aa24.91■■□□□ 1.58
RPAIN-210ENST00000571613 BCL2L13Q9BXK5 485 aa24.91■■□□□ 1.58
RPAIN-210ENST00000571613 LTBP4Q8N2S1 1624 aa24.9■■□□□ 1.58
RPAIN-210ENST00000571613 COL18A1P39060 1754 aa24.89■■□□□ 1.57
RPAIN-210ENST00000571613 AKAP4Q5JQC9 854 aa24.88■■□□□ 1.57
RPAIN-210ENST00000571613 FTSJ3Q8IY81 847 aaKnown RBP24.88■■□□□ 1.57
RPAIN-210ENST00000571613 FAM208AQ9UK61 1670 aaKnown RBP24.88■■□□□ 1.57
RPAIN-210ENST00000571613 ATF7IPQ6VMQ6 1270 aa24.88■■□□□ 1.57
RPAIN-210ENST00000571613 DZIP1LQ8IYY4 767 aaKnown RBP24.88■■□□□ 1.57
RPAIN-210ENST00000571613 TSPYL4Q9UJ04 414 aa24.88■■□□□ 1.57
RPAIN-210ENST00000571613 ARHGAP45Q92619 1136 aa24.87■■□□□ 1.57
RPAIN-210ENST00000571613 SOS1Q07889 1333 aaPredicted RBP24.87■■□□□ 1.57
RPAIN-210ENST00000571613 LMO7Q8WWI1 1683 aa24.86■■□□□ 1.57
RPAIN-210ENST00000571613 CSB-PGBD3P0DP91 1061 aa24.86■■□□□ 1.57
RPAIN-210ENST00000571613 PANK1Q8TE04 598 aa24.86■■□□□ 1.57
RPAIN-210ENST00000571613 LRRC37A3O60309 1634 aa24.86■■□□□ 1.57
RPAIN-210ENST00000571613 TAF7Q15545 349 aaPredicted RBP24.85■■□□□ 1.57
RPAIN-210ENST00000571613 C1orf141Q5JVX7 400 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 TSPYL6Q8N831 410 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 C8orf58Q8NAV2 365 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 RAPGEF4Q8WZA2 1011 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 PRDM11Q9NQV5 511 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 NLRP2Q9NX02 1062 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 RGPD2P0DJD1 1756 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
RPAIN-210ENST00000571613 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.85■■□□□ 1.572e-8■□□□□ 9.4
RPAIN-210ENST00000571613 NOB1Q9ULX3 412 aaKnown RBP24.85■■□□□ 1.57
RPAIN-210ENST00000571613 CEMIPQ8WUJ3 1361 aa24.84■■□□□ 1.57
RPAIN-210ENST00000571613 ZNF530Q6P9A1 599 aaPredicted RBP24.84■■□□□ 1.57
RPAIN-210ENST00000571613 COG6Q9Y2V7 657 aa24.84■■□□□ 1.57
RPAIN-210ENST00000571613 RGPD5Q99666 1765 aa24.83■■□□□ 1.57
RPAIN-210ENST00000571613 MRPL50Q8N5N7 158 aaKnown RBP24.83■■□□□ 1.57
RPAIN-210ENST00000571613 OVOS2A0A0G2JMS6 1433 aa24.82■■□□□ 1.56
RPAIN-210ENST00000571613 TRIM27P14373 513 aa24.82■■□□□ 1.56
RPAIN-210ENST00000571613 TATP17735 454 aaPredicted RBP24.82■■□□□ 1.56
RPAIN-210ENST00000571613 CHRNA2Q15822 529 aa24.82■■□□□ 1.56
RPAIN-210ENST00000571613 MVPQ14764 893 aaKnown RBP24.81■■□□□ 1.56
RPAIN-210ENST00000571613 CLUAP1Q96AJ1 413 aa24.81■■□□□ 1.56
RPAIN-210ENST00000571613 ELL2O00472 640 aaPredicted RBP24.81■■□□□ 1.56
RPAIN-210ENST00000571613 CENPQQ7L2Z9 268 aaPredicted RBP24.81■■□□□ 1.56
RPAIN-210ENST00000571613 AHDC1Q5TGY3 1603 aaPredicted RBP24.8■■□□□ 1.56
RPAIN-210ENST00000571613 CHMP4AQ9BY43 222 aa24.8■■□□□ 1.56
RPAIN-210ENST00000571613 CHMP4BQ9H444 224 aaKnown RBP24.8■■□□□ 1.56
RPAIN-210ENST00000571613 SPG7Q9UQ90 795 aa24.8■■□□□ 1.56
RPAIN-210ENST00000571613 DDX19BQ9UMR2 479 aa24.79■■□□□ 1.56
RPAIN-210ENST00000571613 RLBP1P12271 317 aa24.78■■□□□ 1.56
RPAIN-210ENST00000571613 ROBO1Q9Y6N7 1651 aa24.78■■□□□ 1.56
RPAIN-210ENST00000571613 WDR17Q8IZU2 1322 aa24.77■■□□□ 1.56
RPAIN-210ENST00000571613 TEFQ10587 303 aa24.77■■□□□ 1.56
RPAIN-210ENST00000571613 API5Q9BZZ5 524 aaKnown RBP24.77■■□□□ 1.56
RPAIN-210ENST00000571613 ABCA3Q99758 1704 aa24.76■■□□□ 1.55
RPAIN-210ENST00000571613 TOM1O60784 492 aa24.75■■□□□ 1.55
RPAIN-210ENST00000571613 MIS18AQ9NYP9 233 aa24.75■■□□□ 1.55
RPAIN-210ENST00000571613 RNMTO43148 476 aaKnown RBP24.74■■□□□ 1.55
RPAIN-210ENST00000571613 KDM2BQ8NHM5 1336 aa24.74■■□□□ 1.55
RPAIN-210ENST00000571613 TNNQ9UQP3 1299 aa24.72■■□□□ 1.55
RPAIN-210ENST00000571613 COL5A2P05997 1499 aaPredicted RBP24.72■■□□□ 1.55
RPAIN-210ENST00000571613 HSP90AB1P08238 724 aaKnown RBP24.72■■□□□ 1.55
RPAIN-210ENST00000571613 ITPRIPQ8IWB1 547 aa24.72■■□□□ 1.55
RPAIN-210ENST00000571613 LGR6Q9HBX8 967 aa24.72■■□□□ 1.55
RPAIN-210ENST00000571613 PTPRCP08575 1304 aa24.71■■□□□ 1.55
RPAIN-210ENST00000571613 HOXB7P09629 217 aa24.71■■□□□ 1.55
RPAIN-210ENST00000571613 MPRIPQ6WCQ1 1025 aa24.71■■□□□ 1.55
RPAIN-210ENST00000571613 TOM1L2Q6ZVM7 507 aa24.71■■□□□ 1.55
RPAIN-210ENST00000571613 IFNL2Q8IZJ0 200 aa24.71■■□□□ 1.55
RPAIN-210ENST00000571613 KRT24Q2M2I5 525 aa24.7■■□□□ 1.54
RPAIN-210ENST00000571613 CCDC30Q5VVM6 783 aa24.7■■□□□ 1.54
RPAIN-210ENST00000571613 TMEM57Q8N5G2 664 aa24.7■■□□□ 1.54
RPAIN-210ENST00000571613 CARD10Q9BWT7 1032 aa24.7■■□□□ 1.54
RPAIN-210ENST00000571613 EVA1CP58658 441 aa24.69■■□□□ 1.54
RPAIN-210ENST00000571613 STK31Q9BXU1 1019 aa24.69■■□□□ 1.54
RPAIN-210ENST00000571613 MEGF6O75095 1541 aa24.68■■□□□ 1.54
RPAIN-210ENST00000571613 COL22A1Q8NFW1 1626 aaPredicted RBP24.68■■□□□ 1.54
RPAIN-210ENST00000571613 BTBD11A6QL63 1104 aa24.68■■□□□ 1.54
RPAIN-210ENST00000571613 ABCC4O15439 1325 aa24.68■■□□□ 1.54
RPAIN-210ENST00000571613 PHKG2P15735 406 aa24.67■■□□□ 1.54
RPAIN-210ENST00000571613 TSHZ2Q9NRE2 1034 aa24.67■■□□□ 1.54
RPAIN-210ENST00000571613 ADAMTS7Q9UKP4 1686 aa24.67■■□□□ 1.54
RPAIN-210ENST00000571613 RWDD1Q9H446 243 aaPredicted RBP24.66■■□□□ 1.54
RPAIN-210ENST00000571613 TCERG1O14776 1098 aaKnown RBP24.65■■□□□ 1.54
RPAIN-210ENST00000571613 SLC4A2P04920 1241 aa24.65■■□□□ 1.54
RPAIN-210ENST00000571613 EIF4A1P60842 406 aaKnown RBP24.64■■□□□ 1.53
RPAIN-210ENST00000571613 DCAF5Q96JK2 942 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms