RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 VAC14Q08AM6 782 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 SCARF1Q14162 830 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 SEPT12Q8IYM1 358 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 MEIOBQ8N635 442 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 KIFC2Q96AC6 838 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 TRIM47Q96LD4 638 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 TMPRSS4Q9NRS4 437 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 COG6Q9Y2V7 657 aa5.9□□□□□ -1.46
CFDP1-210ENST00000570279 TTBK1Q5TCY1 1321 aaPredicted RBP5.9□□□□□ -1.47
CFDP1-210ENST00000570279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.9□□□□□ -1.47
CFDP1-210ENST00000570279 ERVH48-1M5A8F1 160 aa5.89□□□□□ -1.47
CFDP1-210ENST00000570279 UPP2O95045 317 aa5.89□□□□□ -1.47
CFDP1-210ENST00000570279 EIF4G2P78344 907 aaKnown RBP eCLIP5.89□□□□□ -1.47
CFDP1-210ENST00000570279 LINC00528Q8N1L1 170 aa5.89□□□□□ -1.47
CFDP1-210ENST00000570279 ZNF784Q8NCA9 323 aaPredicted RBP5.89□□□□□ -1.47
CFDP1-210ENST00000570279 POM121Q96HA1 1249 aa5.89□□□□□ -1.47
CFDP1-210ENST00000570279 ZFP42Q96MM3 310 aa5.89□□□□□ -1.47
CFDP1-210ENST00000570279 PURBQ96QR8 312 aaKnown RBP5.89□□□□□ -1.47
CFDP1-210ENST00000570279 SNRPBP14678 240 aaKnown RBP5.88□□□□□ -1.47
CFDP1-210ENST00000570279 CBLBQ13191 982 aa5.88□□□□□ -1.47
CFDP1-210ENST00000570279 WASHC4Q2M389 1173 aa5.88□□□□□ -1.47
CFDP1-210ENST00000570279 C6orf118Q5T5N4 469 aa5.88□□□□□ -1.47
CFDP1-210ENST00000570279 RNF20Q5VTR2 975 aa5.88□□□□□ -1.47
CFDP1-210ENST00000570279 FHAD1B1AJZ9 1412 aa5.88□□□□□ -1.47
CFDP1-210ENST00000570279 RAD21O60216 631 aa5.87□□□□□ -1.47
CFDP1-210ENST00000570279 BMP2P12643 396 aa5.87□□□□□ -1.47
CFDP1-210ENST00000570279 Q6ZVU0 165 aa5.87□□□□□ -1.47
CFDP1-210ENST00000570279 TSEN34Q9BSV6 310 aaKnown RBP5.87□□□□□ -1.47
CFDP1-210ENST00000570279 CUX1P39880 1505 aa5.87□□□□□ -1.47
CFDP1-210ENST00000570279 ARHGAP35Q9NRY4 1499 aa5.86□□□□□ -1.47
CFDP1-210ENST00000570279 IGF1RP08069 1367 aa5.86□□□□□ -1.47
CFDP1-210ENST00000570279 CCDC125Q86Z20 511 aa5.86□□□□□ -1.47
CFDP1-210ENST00000570279 WWC1Q8IX03 1113 aa5.86□□□□□ -1.47
CFDP1-210ENST00000570279 TRIM52Q96A61 297 aa5.86□□□□□ -1.47
CFDP1-210ENST00000570279 CYLDQ9NQC7 956 aa5.86□□□□□ -1.47
CFDP1-210ENST00000570279 CEP126Q9P2H0 1117 aa5.86□□□□□ -1.47
CFDP1-210ENST00000570279 LILRA1O75019 489 aa5.85□□□□□ -1.47
CFDP1-210ENST00000570279 KANK4Q5T7N3 995 aaPredicted RBP5.85□□□□□ -1.47
CFDP1-210ENST00000570279 PCDHB11Q9Y5F2 797 aa5.85□□□□□ -1.47
CFDP1-210ENST00000570279 AQRO60306 1485 aaKnown RBP eCLIP5.84□□□□□ -1.47
CFDP1-210ENST00000570279 SETD5Q9C0A6 1442 aa5.84□□□□□ -1.47
CFDP1-210ENST00000570279 CADPSQ9ULU8 1353 aa5.84□□□□□ -1.47
CFDP1-210ENST00000570279 ADH1AP07327 375 aa5.84□□□□□ -1.47
CFDP1-210ENST00000570279 ADD1P35611 737 aaKnown RBP5.84□□□□□ -1.47
CFDP1-210ENST00000570279 RELBQ01201 579 aa5.84□□□□□ -1.47
CFDP1-210ENST00000570279 SEMA3FQ13275 785 aa5.84□□□□□ -1.47
CFDP1-210ENST00000570279 ZNF775Q96BV0 537 aaPredicted RBP5.84□□□□□ -1.47
CFDP1-210ENST00000570279 AGBL1Q96MI9 1066 aa5.84□□□□□ -1.47
CFDP1-210ENST00000570279 YTHDC1Q96MU7 727 aaKnown RBP5.84□□□□□ -1.47
CFDP1-210ENST00000570279 CARMIL1Q5VZK9 1371 aa5.83□□□□□ -1.48
CFDP1-210ENST00000570279 SOX11P35716 441 aa5.83□□□□□ -1.48
CFDP1-210ENST00000570279 ERVK-9P63128 1117 aa5.83□□□□□ -1.48
CFDP1-210ENST00000570279 SLFNL1Q499Z3 407 aa5.83□□□□□ -1.48
CFDP1-210ENST00000570279 CC2D2BQ6DHV5 1058 aa5.83□□□□□ -1.48
CFDP1-210ENST00000570279 CLUAP1Q96AJ1 413 aa5.83□□□□□ -1.48
CFDP1-210ENST00000570279 SOS2Q07890 1332 aaPredicted RBP5.82□□□□□ -1.48
CFDP1-210ENST00000570279 SOBPA7XYQ1 873 aa5.82□□□□□ -1.48
CFDP1-210ENST00000570279 SPINT1O43278 529 aa5.82□□□□□ -1.48
CFDP1-210ENST00000570279 MAN1A2O60476 641 aa5.82□□□□□ -1.48
CFDP1-210ENST00000570279 SCTRP47872 440 aa5.82□□□□□ -1.48
CFDP1-210ENST00000570279 RNF135Q8IUD6 432 aa5.82□□□□□ -1.48
CFDP1-210ENST00000570279 CCDC85AQ96PX6 553 aaPredicted RBP5.82□□□□□ -1.48
CFDP1-210ENST00000570279 ZNF395Q9H8N7 513 aaPredicted RBP5.82□□□□□ -1.48
CFDP1-210ENST00000570279 LRRC9Q6ZRR7 1453 aa5.82□□□□□ -1.48
CFDP1-210ENST00000570279 RAB3GAP2Q9H2M9 1393 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 TIAM1Q13009 1591 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 TTLL8A6PVC2 850 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 ATP5J2-PTCD1G3V325 749 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 CCER2I3L3R5 266 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 PHTF2Q8N3S3 785 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 KDF1Q8NAX2 398 aaPredicted RBP5.81□□□□□ -1.48
CFDP1-210ENST00000570279 INSM2Q96T92 566 aaPredicted RBP5.81□□□□□ -1.48
CFDP1-210ENST00000570279 ESF1Q9H501 851 aaKnown RBP5.81□□□□□ -1.48
CFDP1-210ENST00000570279 DNMT3LQ9UJW3 386 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 DOLKQ9UPQ8 538 aa5.81□□□□□ -1.48
CFDP1-210ENST00000570279 EFCAB5A4FU69 1503 aa5.8□□□□□ -1.48
CFDP1-210ENST00000570279 PTGIRP43119 386 aa5.8□□□□□ -1.48
CFDP1-210ENST00000570279 CDCA7Q9BWT1 371 aaPredicted RBP5.8□□□□□ -1.48
CFDP1-210ENST00000570279 ALG2Q9H553 416 aa5.8□□□□□ -1.48
CFDP1-210ENST00000570279 POLMQ9NP87 494 aaPredicted RBP5.8□□□□□ -1.48
CFDP1-210ENST00000570279 SUPT16HQ9Y5B9 1047 aaKnown RBP5.8□□□□□ -1.48
CFDP1-210ENST00000570279 FGD5Q6ZNL6 1462 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 FYCO1Q9BQS8 1478 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 POM121CA8CG34 1229 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 MYCP01106 439 aaPredicted RBP5.79□□□□□ -1.48
CFDP1-210ENST00000570279 CTSOP43234 321 aaPredicted RBP5.79□□□□□ -1.48
CFDP1-210ENST00000570279 TSGA10IPQ3SY00 556 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 OXLD1Q5BKU9 147 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 CYP2U1Q7Z449 544 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 PROSER2Q86WR7 435 aaPredicted RBP5.79□□□□□ -1.48
CFDP1-210ENST00000570279 OSBPL3Q9H4L5 887 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 FMN1Q68DA7 1419 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 CASKIN1Q8WXD9 1431 aa5.79□□□□□ -1.48
CFDP1-210ENST00000570279 FIGNL2A6NMB9 653 aa5.78□□□□□ -1.48
CFDP1-210ENST00000570279 TERTO14746 1132 aaKnown RBP5.78□□□□□ -1.48
CFDP1-210ENST00000570279 TRAK2O60296 914 aa5.78□□□□□ -1.48
CFDP1-210ENST00000570279 RANGAP1P46060 587 aaPredicted RBP5.78□□□□□ -1.48
CFDP1-210ENST00000570279 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.78□□□□□ -1.48
CFDP1-210ENST00000570279 RNF217Q8TC41 542 aa5.78□□□□□ -1.48
CFDP1-210ENST00000570279 NXF1Q9UBU9 619 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms