RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 MAP3K5Q99683 1374 aa29.45■■■□□ 2.31
PKD1-240ENST00000570253 CGNL1Q0VF96 1302 aa29.45■■■□□ 2.3
PKD1-240ENST00000570253 RAPGEF4Q8WZA2 1011 aa29.44■■■□□ 2.3
PKD1-240ENST00000570253 AKT1S1Q96B36 256 aa29.44■■■□□ 2.3
PKD1-240ENST00000570253 KLHL34Q8N239 644 aa29.43■■■□□ 2.3
PKD1-240ENST00000570253 HMGB2P26583 209 aaKnown RBP29.42■■■□□ 2.3
PKD1-240ENST00000570253 RGPD2P0DJD1 1756 aa29.41■■■□□ 2.3
PKD1-240ENST00000570253 CHD4Q14839 1912 aa29.41■■■□□ 2.3
PKD1-240ENST00000570253 RRS1Q15050 365 aaKnown RBP29.41■■■□□ 2.3
PKD1-240ENST00000570253 GGNBP2Q9H3C7 697 aa29.41■■■□□ 2.3
PKD1-240ENST00000570253 USP47Q96K76 1375 aa29.4■■■□□ 2.3
PKD1-240ENST00000570253 FBLN1P23142 703 aa29.4■■■□□ 2.3
PKD1-240ENST00000570253 MEGF6O75095 1541 aa29.4■■■□□ 2.3
PKD1-240ENST00000570253 TATP17735 454 aaPredicted RBP29.39■■■□□ 2.3
PKD1-240ENST00000570253 GPR162Q16538 588 aa29.39■■■□□ 2.3
PKD1-240ENST00000570253 CCNL1Q9UK58 526 aaPredicted RBP29.39■■■□□ 2.3
PKD1-240ENST00000570253 FYB1O15117 783 aa29.38■■■□□ 2.29
PKD1-240ENST00000570253 PNPLA7Q6ZV29 1317 aa29.38■■■□□ 2.29
PKD1-240ENST00000570253 LY75O60449 1722 aa29.37■■■□□ 2.29
PKD1-240ENST00000570253 ZNF784Q8NCA9 323 aaPredicted RBP29.37■■■□□ 2.29
PKD1-240ENST00000570253 SHANK3Q9BYB0 1731 aa29.37■■■□□ 2.29
PKD1-240ENST00000570253 NBPF6Q5VWK0 638 aa29.36■■■□□ 2.29
PKD1-240ENST00000570253 NBPF4Q96M43 638 aa29.36■■■□□ 2.29
PKD1-240ENST00000570253 MSH5O43196 834 aa29.35■■■□□ 2.29
PKD1-240ENST00000570253 KIF20BQ96Q89 1820 aa29.35■■■□□ 2.29
PKD1-240ENST00000570253 USHBP1Q8N6Y0 703 aa29.34■■■□□ 2.29
PKD1-240ENST00000570253 PCDH11XQ9BZA7 1347 aa29.34■■■□□ 2.29
PKD1-240ENST00000570253 PCDH11YQ9BZA8 1340 aa29.34■■■□□ 2.29
PKD1-240ENST00000570253 FLT4P35916 1363 aa29.34■■■□□ 2.29
PKD1-240ENST00000570253 KIF24Q5T7B8 1368 aa29.34■■■□□ 2.29
PKD1-240ENST00000570253 KCNQ4P56696 695 aa29.33■■■□□ 2.29
PKD1-240ENST00000570253 NSD2O96028 1365 aa29.33■■■□□ 2.29
PKD1-240ENST00000570253 INSRP06213 1382 aa29.32■■■□□ 2.28
PKD1-240ENST00000570253 PELP1Q8IZL8 1130 aaKnown RBP29.32■■■□□ 2.28
PKD1-240ENST00000570253 TUBGCP6Q96RT7 1819 aa29.31■■■□□ 2.28
PKD1-240ENST00000570253 COL24A1Q17RW2 1714 aa29.28■■■□□ 2.28
PKD1-240ENST00000570253 HSP90AB2PQ58FF8 381 aa29.28■■■□□ 2.28
PKD1-240ENST00000570253 TRIM26Q12899 539 aaPredicted RBP29.27■■■□□ 2.28
PKD1-240ENST00000570253 FLAD1Q8NFF5 587 aa29.25■■■□□ 2.27
PKD1-240ENST00000570253 UTRNP46939 3433 aa29.25■■■□□ 2.27
PKD1-240ENST00000570253 MPRIPQ6WCQ1 1025 aa29.22■■■□□ 2.27
PKD1-240ENST00000570253 SMARCC1Q92922 1105 aaPredicted RBP29.22■■■□□ 2.27
PKD1-240ENST00000570253 PALLDQ8WX93 1383 aa29.22■■■□□ 2.27
PKD1-240ENST00000570253 C5P01031 1676 aa29.21■■■□□ 2.27
PKD1-240ENST00000570253 NSD3Q9BZ95 1437 aa29.21■■■□□ 2.27
PKD1-240ENST00000570253 COL23A1Q86Y22 540 aaPredicted RBP29.21■■■□□ 2.27
PKD1-240ENST00000570253 PPM1GO15355 546 aaPredicted RBP29.2■■■□□ 2.26
PKD1-240ENST00000570253 GRIN3BO60391 1043 aa29.2■■■□□ 2.26
PKD1-240ENST00000570253 SPG7Q9UQ90 795 aa29.19■■■□□ 2.26
PKD1-240ENST00000570253 EMILIN1Q9Y6C2 1016 aa29.18■■■□□ 2.26
PKD1-240ENST00000570253 NLGN2Q8NFZ4 835 aa29.17■■■□□ 2.26
PKD1-240ENST00000570253 AK7Q96M32 723 aa29.17■■■□□ 2.26
PKD1-240ENST00000570253 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
PKD1-240ENST00000570253 CYP27B1O15528 508 aa29.15■■■□□ 2.26
PKD1-240ENST00000570253 MSL1Q68DK7 614 aa29.15■■■□□ 2.26
PKD1-240ENST00000570253 PKD1L3Q7Z443 1732 aa29.14■■■□□ 2.26
PKD1-240ENST00000570253 C1QTNF8P60827 252 aa29.14■■■□□ 2.26
PKD1-240ENST00000570253 TAF1LQ8IZX4 1826 aa29.13■■■□□ 2.25
PKD1-240ENST00000570253 SENP3-EIF4A1A0A087X0R7 540 aa29.13■■■□□ 2.25
PKD1-240ENST00000570253 CARD14Q9BXL6 1004 aa29.13■■■□□ 2.25
PKD1-240ENST00000570253 ITGB4P16144 1822 aa29.13■■■□□ 2.25
PKD1-240ENST00000570253 GIGYF1O75420 1035 aaPredicted RBP29.12■■■□□ 2.25
PKD1-240ENST00000570253 CD2APQ9Y5K6 639 aa29.1■■■□□ 2.25
PKD1-240ENST00000570253 C4BP0C0L5 1744 aa29.1■■■□□ 2.25
PKD1-240ENST00000570253 WASHC2AQ641Q2 1341 aa29.1■■■□□ 2.25
PKD1-240ENST00000570253 POLR3GLQ9BT43 218 aa29.09■■■□□ 2.25
PKD1-240ENST00000570253 ANKRD26Q9UPS8 1709 aa29.08■■■□□ 2.25
PKD1-240ENST00000570253 TOGARAM1Q9Y4F4 1720 aa29.08■■■□□ 2.25
PKD1-240ENST00000570253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.08■■■□□ 2.25
PKD1-240ENST00000570253 TMOD3Q9NYL9 352 aa29.08■■■□□ 2.25
PKD1-240ENST00000570253 MAP2P11137 1827 aaKnown RBP29.08■■■□□ 2.25
PKD1-240ENST00000570253 NCAPD2Q15021 1401 aa29.07■■■□□ 2.24
PKD1-240ENST00000570253 NKX1-1Q15270 411 aaPredicted RBP29.07■■■□□ 2.24
PKD1-240ENST00000570253 PIGBQ92521 554 aa29.06■■■□□ 2.24
PKD1-240ENST00000570253 PHF14O94880 888 aa29.05■■■□□ 2.24
PKD1-240ENST00000570253 IFNL2Q8IZJ0 200 aa29.05■■■□□ 2.24
PKD1-240ENST00000570253 YBX3P16989 372 aaKnown RBP eCLIP29.04■■■□□ 2.24
PKD1-240ENST00000570253 EYA1Q99502 592 aa29.04■■■□□ 2.24
PKD1-240ENST00000570253 CLSPNQ9HAW4 1339 aa29.03■■■□□ 2.24
PKD1-240ENST00000570253 SSFA2P28290 1259 aa29.03■■■□□ 2.24
PKD1-240ENST00000570253 LOC102724428A0A0B4J2F2 783 aa29.02■■■□□ 2.24
PKD1-240ENST00000570253 SIK1P57059 783 aa29.02■■■□□ 2.24
PKD1-240ENST00000570253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.01■■■□□ 2.23
PKD1-240ENST00000570253 GOLGB1Q14789 3259 aaKnown RBP29.01■■■□□ 2.23
PKD1-240ENST00000570253 UBR3Q6ZT12 1888 aa29■■■□□ 2.23
PKD1-240ENST00000570253 POLKQ9UBT6 870 aa29■■■□□ 2.23
PKD1-240ENST00000570253 PLEKHG2Q9H7P9 1386 aa29■■■□□ 2.23
PKD1-240ENST00000570253 PHKG2P15735 406 aa28.98■■■□□ 2.23
PKD1-240ENST00000570253 ATP6V1AP38606 617 aa28.98■■■□□ 2.23
PKD1-240ENST00000570253 TNNT2P45379 298 aaPredicted RBP28.97■■■□□ 2.23
PKD1-240ENST00000570253 GNPATO15228 680 aa28.95■■■□□ 2.22
PKD1-240ENST00000570253 HSP90AB1P08238 724 aaKnown RBP28.95■■■□□ 2.22
PKD1-240ENST00000570253 EIF4A2Q14240 407 aaKnown RBP28.95■■■□□ 2.22
PKD1-240ENST00000570253 LINC00116Q8NCU8 138 aa28.95■■■□□ 2.22
PKD1-240ENST00000570253 PCGF6Q9BYE7 350 aa28.94■■■□□ 2.22
PKD1-240ENST00000570253 ASAP1Q9ULH1 1129 aa28.94■■■□□ 2.22
PKD1-240ENST00000570253 EIF4G2P78344 907 aaKnown RBP eCLIP28.92■■■□□ 2.22
PKD1-240ENST00000570253 IGSF1Q8N6C5 1336 aa28.92■■■□□ 2.22
PKD1-240ENST00000570253 ATP10DQ9P241 1426 aa28.91■■■□□ 2.22
PKD1-240ENST00000570253 PLEKHO1Q53GL0 409 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms