RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
GDE1-205ENST00000569899 NME9Q86XW9 330 aa13.49□□□□□ -0.25
GDE1-205ENST00000569899 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
GDE1-205ENST00000569899 LHX8Q68G74 356 aa13.48□□□□□ -0.25
GDE1-205ENST00000569899 OVOS2A0A0J9YW53 1432 aa13.48□□□□□ -0.25
GDE1-205ENST00000569899 OVOS2Q6IE36 1432 aa13.48□□□□□ -0.25
GDE1-205ENST00000569899 ATF3P18847 181 aa13.47□□□□□ -0.25
GDE1-205ENST00000569899 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
GDE1-205ENST00000569899 ORAI2Q96SN7 254 aa13.46□□□□□ -0.25
GDE1-205ENST00000569899 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.26
GDE1-205ENST00000569899 OTUD5Q96G74 571 aa13.46□□□□□ -0.26
GDE1-205ENST00000569899 ALS2Q96Q42 1657 aa13.46□□□□□ -0.26
GDE1-205ENST00000569899 DPYSL4O14531 572 aa13.45□□□□□ -0.26
GDE1-205ENST00000569899 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
GDE1-205ENST00000569899 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
GDE1-205ENST00000569899 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
GDE1-205ENST00000569899 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
GDE1-205ENST00000569899 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
GDE1-205ENST00000569899 PEAK1Q9H792 1746 aa13.43□□□□□ -0.26
GDE1-205ENST00000569899 LTN1O94822 1766 aa13.42□□□□□ -0.26
GDE1-205ENST00000569899 OXER1Q8TDS5 423 aa13.42□□□□□ -0.26
GDE1-205ENST00000569899 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
GDE1-205ENST00000569899 COG3Q96JB2 828 aa13.42□□□□□ -0.26
GDE1-205ENST00000569899 SLC34A2O95436 690 aa13.41□□□□□ -0.26
GDE1-205ENST00000569899 XPCQ01831 940 aaPredicted RBP13.41□□□□□ -0.26
GDE1-205ENST00000569899 USP31Q70CQ4 1352 aa13.41□□□□□ -0.26
GDE1-205ENST00000569899 CRYBG1Q9Y4K1 1723 aa13.4□□□□□ -0.26
GDE1-205ENST00000569899 PXDNQ92626 1479 aa13.4□□□□□ -0.26
GDE1-205ENST00000569899 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
GDE1-205ENST00000569899 FOXO3O43524 673 aa13.4□□□□□ -0.26
GDE1-205ENST00000569899 MTHFSP49914 203 aa13.4□□□□□ -0.26
GDE1-205ENST00000569899 PHRF1Q9P1Y6 1649 aaKnown RBP13.4□□□□□ -0.26
GDE1-205ENST00000569899 FBLN1P23142 703 aa13.39□□□□□ -0.27
GDE1-205ENST00000569899 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
GDE1-205ENST00000569899 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
GDE1-205ENST00000569899 AATKQ6ZMQ8 1374 aa13.39□□□□□ -0.27
GDE1-205ENST00000569899 PSME1Q06323 249 aa13.39□□□□□ -0.27
GDE1-205ENST00000569899 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
GDE1-205ENST00000569899 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
GDE1-205ENST00000569899 SEMA3EO15041 775 aa13.38□□□□□ -0.27
GDE1-205ENST00000569899 MAP3K9P80192 1104 aa13.38□□□□□ -0.27
GDE1-205ENST00000569899 NUTM2GQ5VZR2 741 aa13.38□□□□□ -0.27
GDE1-205ENST00000569899 SLIT3O75094 1523 aa13.38□□□□□ -0.27
GDE1-205ENST00000569899 NFAT5O94916 1531 aa13.38□□□□□ -0.27
GDE1-205ENST00000569899 HOXB3P14651 431 aaPredicted RBP13.37□□□□□ -0.27
GDE1-205ENST00000569899 HNRNPUQ00839 825 aaKnown RBP eCLIP13.37□□□□□ -0.27
GDE1-205ENST00000569899 BRINP3Q76B58 766 aa13.37□□□□□ -0.27
GDE1-205ENST00000569899 EMILIN1Q9Y6C2 1016 aa13.37□□□□□ -0.27
GDE1-205ENST00000569899 ABCA3Q99758 1704 aa13.37□□□□□ -0.27
GDE1-205ENST00000569899 RRS1Q15050 365 aaKnown RBP13.36□□□□□ -0.27
GDE1-205ENST00000569899 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
GDE1-205ENST00000569899 ABTB2Q8N961 1025 aa13.36□□□□□ -0.27
GDE1-205ENST00000569899 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
GDE1-205ENST00000569899 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
GDE1-205ENST00000569899 NPHP3Q7Z494 1330 aa13.36□□□□□ -0.27
GDE1-205ENST00000569899 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
GDE1-205ENST00000569899 PDIA6Q15084 440 aa13.35□□□□□ -0.27
GDE1-205ENST00000569899 CFAP53Q96M91 514 aa13.35□□□□□ -0.27
GDE1-205ENST00000569899 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
GDE1-205ENST00000569899 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
GDE1-205ENST00000569899 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
GDE1-205ENST00000569899 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
GDE1-205ENST00000569899 INSRP06213 1382 aa13.34□□□□□ -0.27
GDE1-205ENST00000569899 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
GDE1-205ENST00000569899 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
GDE1-205ENST00000569899 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
GDE1-205ENST00000569899 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
GDE1-205ENST00000569899 ADAMTS8Q9UP79 889 aa13.33□□□□□ -0.28
GDE1-205ENST00000569899 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
GDE1-205ENST00000569899 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
GDE1-205ENST00000569899 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
GDE1-205ENST00000569899 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
GDE1-205ENST00000569899 AHDC1Q5TGY3 1603 aaPredicted RBP13.32□□□□□ -0.28
GDE1-205ENST00000569899 TBC1D12O60347 775 aa13.31□□□□□ -0.28
GDE1-205ENST00000569899 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
GDE1-205ENST00000569899 RGPD5Q99666 1765 aa13.31□□□□□ -0.28
GDE1-205ENST00000569899 USP19O94966 1318 aa13.31□□□□□ -0.28
GDE1-205ENST00000569899 MAP3K19Q56UN5 1328 aa13.31□□□□□ -0.28
GDE1-205ENST00000569899 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
GDE1-205ENST00000569899 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
GDE1-205ENST00000569899 ZBED9Q6R2W3 1325 aa13.3□□□□□ -0.28
GDE1-205ENST00000569899 FLT4P35916 1363 aa13.29□□□□□ -0.28
GDE1-205ENST00000569899 DIAPH1O60610 1272 aaKnown RBP13.29□□□□□ -0.28
GDE1-205ENST00000569899 CCDC146Q8IYE0 955 aa13.29□□□□□ -0.28
GDE1-205ENST00000569899 RGPD2P0DJD1 1756 aa13.29□□□□□ -0.28
GDE1-205ENST00000569899 SOS2Q07890 1332 aaPredicted RBP13.29□□□□□ -0.28
GDE1-205ENST00000569899 SPATA31A3Q5VYP0 1347 aa13.29□□□□□ -0.28
GDE1-205ENST00000569899 EVI5O60447 810 aa13.28□□□□□ -0.28
GDE1-205ENST00000569899 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
GDE1-205ENST00000569899 ARHGEF10O15013 1369 aa13.28□□□□□ -0.28
GDE1-205ENST00000569899 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
GDE1-205ENST00000569899 MLLT3P42568 568 aaPredicted RBP13.28□□□□□ -0.28
GDE1-205ENST00000569899 RTL1A6NKG5 1358 aa13.27□□□□□ -0.29
GDE1-205ENST00000569899 U2AF1L5P0DN76 240 aaPredicted RBP13.27□□□□□ -0.29
GDE1-205ENST00000569899 U2AF1Q01081 240 aaKnown RBP eCLIP13.27□□□□□ -0.29
GDE1-205ENST00000569899 COL18A1P39060 1754 aa13.27□□□□□ -0.29
GDE1-205ENST00000569899 KIF24Q5T7B8 1368 aa13.26□□□□□ -0.29
GDE1-205ENST00000569899 IL13P35225 146 aa13.26□□□□□ -0.29
GDE1-205ENST00000569899 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
GDE1-205ENST00000569899 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms