RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 GLI3P10071 1580 aa31.09■■■□□ 2.57
RAB40C-212ENST00000569575 PRKAR2BP31323 418 aa31.09■■■□□ 2.57
RAB40C-212ENST00000569575 RUNDC1Q96C34 613 aa31.09■■■□□ 2.57
RAB40C-212ENST00000569575 SPG7Q9UQ90 795 aa31.09■■■□□ 2.57
RAB40C-212ENST00000569575 WNK3Q9BYP7 1800 aa31.09■■■□□ 2.57
RAB40C-212ENST00000569575 OVOS2A0A0G2JMS6 1433 aa31.08■■■□□ 2.57
RAB40C-212ENST00000569575 PLEKHF1Q96S99 279 aa31.08■■■□□ 2.57
RAB40C-212ENST00000569575 FAM9BQ8IZU0 186 aa31.07■■■□□ 2.56
RAB40C-212ENST00000569575 MAPK8IP3Q9UPT6 1336 aa31.06■■■□□ 2.56
RAB40C-212ENST00000569575 EXOC5O00471 708 aa31.05■■■□□ 2.56
RAB40C-212ENST00000569575 FAM98CQ17RN3 349 aaKnown RBP31.05■■■□□ 2.56
RAB40C-212ENST00000569575 NCBP3Q53F19 620 aaKnown RBP31.05■■■□□ 2.56
RAB40C-212ENST00000569575 NGEFQ8N5V2 710 aa31.05■■■□□ 2.56
RAB40C-212ENST00000569575 GAS2L2Q8NHY3 880 aa31.04■■■□□ 2.56
RAB40C-212ENST00000569575 ZCRB1Q8TBF4 217 aaKnown RBP31.04■■■□□ 2.56
RAB40C-212ENST00000569575 MEGF6O75095 1541 aa31.03■■■□□ 2.56
RAB40C-212ENST00000569575 THSD7AQ9UPZ6 1657 aa31.03■■■□□ 2.56
RAB40C-212ENST00000569575 DDB1Q16531 1140 aa31.02■■■□□ 2.56
RAB40C-212ENST00000569575 PKD1L3Q7Z443 1732 aa31.01■■■□□ 2.56
RAB40C-212ENST00000569575 PCDH11XQ9BZA7 1347 aa31■■■□□ 2.55
RAB40C-212ENST00000569575 PCDH11YQ9BZA8 1340 aa31■■■□□ 2.55
RAB40C-212ENST00000569575 POTEAQ6S8J7 498 aa31■■■□□ 2.55
RAB40C-212ENST00000569575 TNS2Q63HR2 1409 aa30.98■■■□□ 2.55
RAB40C-212ENST00000569575 HSP90AB1P08238 724 aaKnown RBP30.97■■■□□ 2.55
RAB40C-212ENST00000569575 HTATSF1O43719 755 aaKnown RBP30.96■■■□□ 2.55
RAB40C-212ENST00000569575 SEPT12Q8IYM1 358 aa30.96■■■□□ 2.55
RAB40C-212ENST00000569575 IFNL2Q8IZJ0 200 aa30.96■■■□□ 2.55
RAB40C-212ENST00000569575 PHACTR3Q96KR7 559 aa30.96■■■□□ 2.55
RAB40C-212ENST00000569575 C1orf141Q5JVX7 400 aa30.95■■■□□ 2.55
RAB40C-212ENST00000569575 PDE3BQ13370 1112 aa30.94■■■□□ 2.54
RAB40C-212ENST00000569575 NFE2L2Q16236 605 aa30.94■■■□□ 2.54
RAB40C-212ENST00000569575 MTHFSDQ2M296 383 aaKnown RBP30.94■■■□□ 2.54
RAB40C-212ENST00000569575 AKAP4Q5JQC9 854 aa30.94■■■□□ 2.54
RAB40C-212ENST00000569575 A0A0G2JS52 829 aa30.93■■■□□ 2.54
RAB40C-212ENST00000569575 MYT1Q01538 1121 aa30.93■■■□□ 2.54
RAB40C-212ENST00000569575 LMOD3Q0VAK6 560 aa30.93■■■□□ 2.54
RAB40C-212ENST00000569575 LRRC37A3O60309 1634 aa30.93■■■□□ 2.54
RAB40C-212ENST00000569575 ZNF530Q6P9A1 599 aaPredicted RBP30.92■■■□□ 2.54
RAB40C-212ENST00000569575 TMPOP42166 694 aaKnown RBP30.91■■■□□ 2.54
RAB40C-212ENST00000569575 NKX1-1Q15270 411 aaPredicted RBP30.91■■■□□ 2.54
RAB40C-212ENST00000569575 CCDC146Q8IYE0 955 aa30.91■■■□□ 2.54
RAB40C-212ENST00000569575 GNAT3A8MTJ3 354 aa30.89■■■□□ 2.54
RAB40C-212ENST00000569575 PHKG2P15735 406 aa30.89■■■□□ 2.54
RAB40C-212ENST00000569575 BCL9O00512 1426 aa30.89■■■□□ 2.53
RAB40C-212ENST00000569575 APAF1O14727 1248 aa30.88■■■□□ 2.53
RAB40C-212ENST00000569575 CCDC27Q2M243 656 aa30.88■■■□□ 2.53
RAB40C-212ENST00000569575 CYP27B1O15528 508 aa30.87■■■□□ 2.53
RAB40C-212ENST00000569575 DCAF5Q96JK2 942 aa30.87■■■□□ 2.53
RAB40C-212ENST00000569575 SHANK3Q9BYB0 1731 aa30.87■■■□□ 2.53
RAB40C-212ENST00000569575 DDX54Q8TDD1 881 aaKnown RBP30.86■■■□□ 2.53
RAB40C-212ENST00000569575 RTF1Q92541 710 aaKnown RBP30.86■■■□□ 2.53
RAB40C-212ENST00000569575 MAP3K5Q99683 1374 aa30.86■■■□□ 2.53
RAB40C-212ENST00000569575 RIPK4P57078 832 aa30.85■■■□□ 2.53
RAB40C-212ENST00000569575 KRT27Q7Z3Y8 459 aa30.85■■■□□ 2.53
RAB40C-212ENST00000569575 RGS12O14924 1447 aa30.83■■■□□ 2.53
RAB40C-212ENST00000569575 MARCH10Q8NA82 808 aaPredicted RBP30.82■■■□□ 2.52
RAB40C-212ENST00000569575 CALD1Q05682 793 aaKnown RBP30.8■■■□□ 2.52
RAB40C-212ENST00000569575 DLG5Q8TDM6 1919 aa30.8■■■□□ 2.52
RAB40C-212ENST00000569575 ERVV-2B6SEH9 535 aa30.79■■■□□ 2.52
RAB40C-212ENST00000569575 FAM196AQ6ZSG2 479 aa30.79■■■□□ 2.52
RAB40C-212ENST00000569575 BRWD3Q6RI45 1802 aa30.78■■■□□ 2.52
RAB40C-212ENST00000569575 ADAMTS7Q9UKP4 1686 aa30.78■■■□□ 2.52
RAB40C-212ENST00000569575 CEMIPQ8WUJ3 1361 aa30.76■■■□□ 2.51
RAB40C-212ENST00000569575 RNMTO43148 476 aaKnown RBP30.75■■■□□ 2.51
RAB40C-212ENST00000569575 NEUROD2Q15784 382 aa30.75■■■□□ 2.51
RAB40C-212ENST00000569575 SCN11AQ9UI33 1791 aa30.74■■■□□ 2.51
RAB40C-212ENST00000569575 TRIM35Q9UPQ4 493 aa30.74■■■□□ 2.51
RAB40C-212ENST00000569575 MPRIPQ6WCQ1 1025 aa30.73■■■□□ 2.51
RAB40C-212ENST00000569575 RRP7AQ9Y3A4 280 aaKnown RBP30.73■■■□□ 2.51
RAB40C-212ENST00000569575 WDR63Q8IWG1 891 aa30.72■■■□□ 2.51
RAB40C-212ENST00000569575 IL17REQ8NFR9 667 aa30.72■■■□□ 2.51
RAB40C-212ENST00000569575 BABAM1Q9NWV8 329 aa30.72■■■□□ 2.51
RAB40C-212ENST00000569575 WWC1Q8IX03 1113 aa30.71■■■□□ 2.51
RAB40C-212ENST00000569575 KDM6AO15550 1401 aaPredicted RBP30.71■■■□□ 2.51
RAB40C-212ENST00000569575 TEFQ10587 303 aa30.7■■■□□ 2.51
RAB40C-212ENST00000569575 HNRNPUQ00839 825 aaKnown RBP eCLIP30.69■■■□□ 2.5
RAB40C-212ENST00000569575 IL16Q14005 1332 aa30.69■■■□□ 2.5
RAB40C-212ENST00000569575 VIRMAQ69YN4 1812 aaKnown RBP30.68■■■□□ 2.5
RAB40C-212ENST00000569575 CABP4P57796 275 aa30.68■■■□□ 2.5
RAB40C-212ENST00000569575 SLC52A2Q9HAB3 445 aa30.68■■■□□ 2.5
RAB40C-212ENST00000569575 MRC1P22897 1456 aa30.68■■■□□ 2.5
RAB40C-212ENST00000569575 LGR6Q9HBX8 967 aa30.67■■■□□ 2.5
RAB40C-212ENST00000569575 MCM10Q7L590 875 aa30.66■■■□□ 2.5
RAB40C-212ENST00000569575 TAF7Q15545 349 aaPredicted RBP30.65■■■□□ 2.5
RAB40C-212ENST00000569575 ZNF521Q96K83 1311 aa30.65■■■□□ 2.5
RAB40C-212ENST00000569575 TMOD3Q9NYL9 352 aa30.64■■■□□ 2.5
RAB40C-212ENST00000569575 ZBED9Q6R2W3 1325 aa30.64■■■□□ 2.5
RAB40C-212ENST00000569575 KAT6BQ8WYB5 2073 aa30.63■■■□□ 2.49
RAB40C-212ENST00000569575 BCL11BQ9C0K0 894 aaPredicted RBP30.63■■■□□ 2.49
RAB40C-212ENST00000569575 SBF2Q86WG5 1849 aa30.62■■■□□ 2.49
RAB40C-212ENST00000569575 PRIM1P49642 420 aaKnown RBP30.61■■■□□ 2.49
RAB40C-212ENST00000569575 GNAI1P63096 354 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 DCTN1Q14203 1278 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 NFATC2IPQ8NCF5 419 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 CFAP44Q96MT7 982 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 IFT57Q9NWB7 429 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 NHSQ6T4R5 1651 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 DOT1LQ8TEK3 1739 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 ITGB4P16144 1822 aa30.61■■■□□ 2.49
RAB40C-212ENST00000569575 TOGARAM1Q9Y4F4 1720 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms