RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 SLC12A5Q9H2X9 1139 aa15.93■□□□□ 0.14
CHRFAM7A-206ENST00000569278 LRRC4BQ9NT99 713 aa15.93■□□□□ 0.14
CHRFAM7A-206ENST00000569278 NSD2O96028 1365 aa15.92■□□□□ 0.14
CHRFAM7A-206ENST00000569278 LY75O60449 1722 aa15.92■□□□□ 0.14
CHRFAM7A-206ENST00000569278 FHDC1Q9C0D6 1143 aaPredicted RBP15.92■□□□□ 0.14
CHRFAM7A-206ENST00000569278 STK32BQ9NY57 414 aa15.92■□□□□ 0.14
CHRFAM7A-206ENST00000569278 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
CHRFAM7A-206ENST00000569278 IL2RBP14784 551 aa15.9■□□□□ 0.14
CHRFAM7A-206ENST00000569278 SYT17Q9BSW7 474 aa15.9■□□□□ 0.14
CHRFAM7A-206ENST00000569278 MTFR1LQ9H019 292 aa15.9■□□□□ 0.14
CHRFAM7A-206ENST00000569278 NLRP2Q9NX02 1062 aa15.9■□□□□ 0.14
CHRFAM7A-206ENST00000569278 MEGF6O75095 1541 aa15.89■□□□□ 0.13
CHRFAM7A-206ENST00000569278 MAP3K5Q99683 1374 aa15.89■□□□□ 0.13
CHRFAM7A-206ENST00000569278 TESK2Q96S53 571 aa15.89■□□□□ 0.13
CHRFAM7A-206ENST00000569278 CHD4Q14839 1912 aa15.89■□□□□ 0.13
CHRFAM7A-206ENST00000569278 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
CHRFAM7A-206ENST00000569278 CARD11Q9BXL7 1154 aa15.88■□□□□ 0.13
CHRFAM7A-206ENST00000569278 SPDYE2BA6NHP3 402 aa15.87■□□□□ 0.13
CHRFAM7A-206ENST00000569278 SPDYE6P0CI01 402 aa15.87■□□□□ 0.13
CHRFAM7A-206ENST00000569278 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
CHRFAM7A-206ENST00000569278 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
CHRFAM7A-206ENST00000569278 ZNF784Q8NCA9 323 aaPredicted RBP15.86■□□□□ 0.13
CHRFAM7A-206ENST00000569278 FBLN1P23142 703 aa15.85■□□□□ 0.13
CHRFAM7A-206ENST00000569278 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
CHRFAM7A-206ENST00000569278 MAP3K19Q56UN5 1328 aa15.85■□□□□ 0.13
CHRFAM7A-206ENST00000569278 SPDYE4A6NLX3 237 aa15.84■□□□□ 0.13
CHRFAM7A-206ENST00000569278 IP6K1Q92551 441 aa15.84■□□□□ 0.13
CHRFAM7A-206ENST00000569278 PNPLA7Q6ZV29 1317 aa15.84■□□□□ 0.13
CHRFAM7A-206ENST00000569278 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
CHRFAM7A-206ENST00000569278 KCNQ4P56696 695 aa15.83■□□□□ 0.12
CHRFAM7A-206ENST00000569278 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
CHRFAM7A-206ENST00000569278 ANKRD36BQ8N2N9 1353 aa15.83■□□□□ 0.12
CHRFAM7A-206ENST00000569278 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.12
CHRFAM7A-206ENST00000569278 CEP350Q5VT06 3117 aa15.82■□□□□ 0.12
CHRFAM7A-206ENST00000569278 HOXC9P31274 260 aa15.82■□□□□ 0.12
CHRFAM7A-206ENST00000569278 FKBP8Q14318 412 aa15.82■□□□□ 0.12
CHRFAM7A-206ENST00000569278 PUS7Q96PZ0 661 aaKnown RBP15.82■□□□□ 0.12
CHRFAM7A-206ENST00000569278 ARXQ96QS3 562 aa15.82■□□□□ 0.12
CHRFAM7A-206ENST00000569278 LTV1Q96GA3 475 aaPredicted RBP15.8■□□□□ 0.12
CHRFAM7A-206ENST00000569278 TERF2IPQ9NYB0 399 aa15.8■□□□□ 0.12
CHRFAM7A-206ENST00000569278 KIF20BQ96Q89 1820 aa15.8■□□□□ 0.12
CHRFAM7A-206ENST00000569278 C5P01031 1676 aa15.79■□□□□ 0.12
CHRFAM7A-206ENST00000569278 RTL1A6NKG5 1358 aa15.79■□□□□ 0.12
CHRFAM7A-206ENST00000569278 DDX54Q8TDD1 881 aaKnown RBP15.79■□□□□ 0.12
CHRFAM7A-206ENST00000569278 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
CHRFAM7A-206ENST00000569278 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
CHRFAM7A-206ENST00000569278 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
CHRFAM7A-206ENST00000569278 SLC27A3Q5K4L6 730 aa15.78■□□□□ 0.12
CHRFAM7A-206ENST00000569278 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-206ENST00000569278 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.12
CHRFAM7A-206ENST00000569278 ANKRD26Q9UPS8 1709 aa15.77■□□□□ 0.12
CHRFAM7A-206ENST00000569278 CLSPNQ9HAW4 1339 aa15.77■□□□□ 0.12
CHRFAM7A-206ENST00000569278 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.12
CHRFAM7A-206ENST00000569278 NLGN2Q8NFZ4 835 aa15.77■□□□□ 0.12
CHRFAM7A-206ENST00000569278 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
CHRFAM7A-206ENST00000569278 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
CHRFAM7A-206ENST00000569278 SSUH2Q9Y2M2 353 aa15.76■□□□□ 0.11
CHRFAM7A-206ENST00000569278 RRS1Q15050 365 aaKnown RBP15.75■□□□□ 0.11
CHRFAM7A-206ENST00000569278 USHBP1Q8N6Y0 703 aa15.74■□□□□ 0.11
CHRFAM7A-206ENST00000569278 COG3Q96JB2 828 aa15.74■□□□□ 0.11
CHRFAM7A-206ENST00000569278 NCAPD2Q15021 1401 aa15.74■□□□□ 0.11
CHRFAM7A-206ENST00000569278 ITGB4P16144 1822 aa15.73■□□□□ 0.11
CHRFAM7A-206ENST00000569278 FYB1O15117 783 aa15.73■□□□□ 0.11
CHRFAM7A-206ENST00000569278 SLC16A10Q8TF71 515 aa15.73■□□□□ 0.11
CHRFAM7A-206ENST00000569278 MAP2P11137 1827 aaKnown RBP15.73■□□□□ 0.11
CHRFAM7A-206ENST00000569278 AMIGO3Q86WK7 504 aa15.72■□□□□ 0.11
CHRFAM7A-206ENST00000569278 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
CHRFAM7A-206ENST00000569278 SYTL4Q96C24 671 aaPredicted RBP15.72■□□□□ 0.11
CHRFAM7A-206ENST00000569278 C4BP0C0L5 1744 aa15.71■□□□□ 0.11
CHRFAM7A-206ENST00000569278 YBX3P16989 372 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHRFAM7A-206ENST00000569278 AMPHP49418 695 aa15.71■□□□□ 0.11
CHRFAM7A-206ENST00000569278 COL23A1Q86Y22 540 aaPredicted RBP15.71■□□□□ 0.11
CHRFAM7A-206ENST00000569278 GGNBP2Q9H3C7 697 aa15.71■□□□□ 0.11
CHRFAM7A-206ENST00000569278 UBR3Q6ZT12 1888 aa15.71■□□□□ 0.11
CHRFAM7A-206ENST00000569278 USP47Q96K76 1375 aa15.71■□□□□ 0.11
CHRFAM7A-206ENST00000569278 TFCP2L1Q9NZI6 479 aa15.7■□□□□ 0.1
CHRFAM7A-206ENST00000569278 CCNL1Q9UK58 526 aaPredicted RBP15.7■□□□□ 0.1
CHRFAM7A-206ENST00000569278 INSRP06213 1382 aa15.7■□□□□ 0.1
CHRFAM7A-206ENST00000569278 HSP90AB2PQ58FF8 381 aa15.69■□□□□ 0.1
CHRFAM7A-206ENST00000569278 C1QTNF8P60827 252 aa15.68■□□□□ 0.1
CHRFAM7A-206ENST00000569278 FLT4P35916 1363 aa15.67■□□□□ 0.1
CHRFAM7A-206ENST00000569278 CYP27B1O15528 508 aa15.67■□□□□ 0.1
CHRFAM7A-206ENST00000569278 GPR162Q16538 588 aa15.67■□□□□ 0.1
CHRFAM7A-206ENST00000569278 KLHL34Q8N239 644 aa15.67■□□□□ 0.1
CHRFAM7A-206ENST00000569278 PALLDQ8WX93 1383 aa15.66■□□□□ 0.1
CHRFAM7A-206ENST00000569278 POLD1P28340 1107 aa15.66■□□□□ 0.1
CHRFAM7A-206ENST00000569278 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
CHRFAM7A-206ENST00000569278 CARD14Q9BXL6 1004 aa15.66■□□□□ 0.1
CHRFAM7A-206ENST00000569278 SMG6Q86US8 1419 aaKnown RBP15.66■□□□□ 0.1
CHRFAM7A-206ENST00000569278 CGNL1Q0VF96 1302 aa15.66■□□□□ 0.1
CHRFAM7A-206ENST00000569278 KIF24Q5T7B8 1368 aa15.65■□□□□ 0.1
CHRFAM7A-206ENST00000569278 KIAA1551Q9HCM1 1747 aa15.65■□□□□ 0.1
CHRFAM7A-206ENST00000569278 PCDH11XQ9BZA7 1347 aa15.65■□□□□ 0.1
CHRFAM7A-206ENST00000569278 PCDH11YQ9BZA8 1340 aa15.65■□□□□ 0.1
CHRFAM7A-206ENST00000569278 ADCY9O60503 1353 aa15.64■□□□□ 0.09
CHRFAM7A-206ENST00000569278 NSD3Q9BZ95 1437 aa15.64■□□□□ 0.09
CHRFAM7A-206ENST00000569278 EMILIN1Q9Y6C2 1016 aa15.64■□□□□ 0.09
CHRFAM7A-206ENST00000569278 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
CHRFAM7A-206ENST00000569278 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
CHRFAM7A-206ENST00000569278 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms