RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 HMOX1P09601 288 aa17.47■□□□□ 0.39
CNOT1-217ENST00000569263 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
CNOT1-217ENST00000569263 KDRP35968 1356 aa17.47■□□□□ 0.39
CNOT1-217ENST00000569263 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
CNOT1-217ENST00000569263 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
CNOT1-217ENST00000569263 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
CNOT1-217ENST00000569263 ZCRB1Q8TBF4 217 aaKnown RBP17.45■□□□□ 0.38
CNOT1-217ENST00000569263 DIEXFQ68CQ4 756 aaKnown RBP17.44■□□□□ 0.38
CNOT1-217ENST00000569263 SPG7Q9UQ90 795 aa17.43■□□□□ 0.38
CNOT1-217ENST00000569263 PCDH11XQ9BZA7 1347 aa17.43■□□□□ 0.38
CNOT1-217ENST00000569263 PCDH11YQ9BZA8 1340 aa17.43■□□□□ 0.38
CNOT1-217ENST00000569263 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
CNOT1-217ENST00000569263 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
CNOT1-217ENST00000569263 WDR43Q15061 677 aaKnown RBP eCLIP17.41■□□□□ 0.38
CNOT1-217ENST00000569263 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
CNOT1-217ENST00000569263 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
CNOT1-217ENST00000569263 SBF2Q86WG5 1849 aa17.4■□□□□ 0.38
CNOT1-217ENST00000569263 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
CNOT1-217ENST00000569263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.381e-12■□□□□ 9.1
CNOT1-217ENST00000569263 DOT1LQ8TEK3 1739 aa17.4■□□□□ 0.38
CNOT1-217ENST00000569263 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
CNOT1-217ENST00000569263 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
CNOT1-217ENST00000569263 RSPH6AQ9H0K4 717 aa17.39■□□□□ 0.37
CNOT1-217ENST00000569263 MRS2Q9HD23 443 aa17.39■□□□□ 0.37
CNOT1-217ENST00000569263 FCHSD2O94868 740 aa17.38■□□□□ 0.37
CNOT1-217ENST00000569263 NEFMP07197 916 aa17.38■□□□□ 0.37
CNOT1-217ENST00000569263 KAT6BQ8WYB5 2073 aa17.37■□□□□ 0.37
CNOT1-217ENST00000569263 NHSQ6T4R5 1651 aa17.37■□□□□ 0.37
CNOT1-217ENST00000569263 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
CNOT1-217ENST00000569263 VIRMAQ69YN4 1812 aaKnown RBP17.36■□□□□ 0.37
CNOT1-217ENST00000569263 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
CNOT1-217ENST00000569263 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
CNOT1-217ENST00000569263 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
CNOT1-217ENST00000569263 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
CNOT1-217ENST00000569263 BCL9O00512 1426 aa17.36■□□□□ 0.37
CNOT1-217ENST00000569263 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
CNOT1-217ENST00000569263 CYP27B1O15528 508 aa17.35■□□□□ 0.37
CNOT1-217ENST00000569263 PHKG2P15735 406 aa17.34■□□□□ 0.37
CNOT1-217ENST00000569263 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
CNOT1-217ENST00000569263 TOGARAM1Q9Y4F4 1720 aa17.34■□□□□ 0.37
CNOT1-217ENST00000569263 MTHFSDQ2M296 383 aaKnown RBP17.33■□□□□ 0.36
CNOT1-217ENST00000569263 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
CNOT1-217ENST00000569263 ITGB4P16144 1822 aa17.33■□□□□ 0.36
CNOT1-217ENST00000569263 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.36
CNOT1-217ENST00000569263 TRIM37O94972 964 aa17.32■□□□□ 0.36
CNOT1-217ENST00000569263 HSP90AB1P08238 724 aaKnown RBP17.32■□□□□ 0.36
CNOT1-217ENST00000569263 SF3B2Q13435 895 aaKnown RBP17.32■□□□□ 0.36
CNOT1-217ENST00000569263 ACSBG1Q96GR2 724 aa17.32■□□□□ 0.36
CNOT1-217ENST00000569263 EP400Q96L91 3159 aa17.32■□□□□ 0.36
CNOT1-217ENST00000569263 DLG5Q8TDM6 1919 aa17.31■□□□□ 0.36
CNOT1-217ENST00000569263 BTAF1O14981 1849 aa17.31■□□□□ 0.36
CNOT1-217ENST00000569263 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
CNOT1-217ENST00000569263 ADAMTS8Q9UP79 889 aa17.31■□□□□ 0.36
CNOT1-217ENST00000569263 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
CNOT1-217ENST00000569263 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
CNOT1-217ENST00000569263 SYTL4Q96C24 671 aaPredicted RBP17.3■□□□□ 0.36
CNOT1-217ENST00000569263 MAP3K5Q99683 1374 aa17.29■□□□□ 0.36
CNOT1-217ENST00000569263 SOCS7O14512 581 aa17.29■□□□□ 0.36
CNOT1-217ENST00000569263 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
CNOT1-217ENST00000569263 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
CNOT1-217ENST00000569263 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
CNOT1-217ENST00000569263 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
CNOT1-217ENST00000569263 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
CNOT1-217ENST00000569263 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
CNOT1-217ENST00000569263 PNISRQ8TF01 805 aaKnown RBP17.28■□□□□ 0.36
CNOT1-217ENST00000569263 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
CNOT1-217ENST00000569263 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
CNOT1-217ENST00000569263 ADAMTS7Q9UKP4 1686 aa17.27■□□□□ 0.36
CNOT1-217ENST00000569263 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.36
CNOT1-217ENST00000569263 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
CNOT1-217ENST00000569263 MIER1Q8N108 512 aa17.27■□□□□ 0.36
CNOT1-217ENST00000569263 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
CNOT1-217ENST00000569263 KCNQ2O43526 872 aa17.26■□□□□ 0.35
CNOT1-217ENST00000569263 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
CNOT1-217ENST00000569263 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
CNOT1-217ENST00000569263 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
CNOT1-217ENST00000569263 APBA3O96018 575 aa17.25■□□□□ 0.35
CNOT1-217ENST00000569263 BAG6P46379 1132 aa17.25■□□□□ 0.35
CNOT1-217ENST00000569263 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
CNOT1-217ENST00000569263 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
CNOT1-217ENST00000569263 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
CNOT1-217ENST00000569263 TMOD3Q9NYL9 352 aa17.24■□□□□ 0.35
CNOT1-217ENST00000569263 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
CNOT1-217ENST00000569263 RNMTO43148 476 aaKnown RBP17.23■□□□□ 0.35
CNOT1-217ENST00000569263 CABP4P57796 275 aa17.23■□□□□ 0.35
CNOT1-217ENST00000569263 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
CNOT1-217ENST00000569263 MRC1P22897 1456 aa17.23■□□□□ 0.35
CNOT1-217ENST00000569263 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
CNOT1-217ENST00000569263 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
CNOT1-217ENST00000569263 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
CNOT1-217ENST00000569263 RRP7AQ9Y3A4 280 aaKnown RBP17.21■□□□□ 0.35
CNOT1-217ENST00000569263 LY75O60449 1722 aa17.21■□□□□ 0.35
CNOT1-217ENST00000569263 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
CNOT1-217ENST00000569263 RIPK4P57078 832 aa17.2■□□□□ 0.34
CNOT1-217ENST00000569263 LMOD3Q0VAK6 560 aa17.2■□□□□ 0.34
CNOT1-217ENST00000569263 TEFQ10587 303 aa17.2■□□□□ 0.34
CNOT1-217ENST00000569263 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
CNOT1-217ENST00000569263 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
CNOT1-217ENST00000569263 RREB1Q92766 1687 aa17.2■□□□□ 0.34
CNOT1-217ENST00000569263 PAPPAQ13219 1627 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms