RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 OVOS2A0A0G2JMS6 1433 aa22.33■■□□□ 1.17
CNEP1R1-210ENST00000568890 DDX54Q8TDD1 881 aaKnown RBP22.33■■□□□ 1.17
CNEP1R1-210ENST00000568890 PARP4Q9UKK3 1724 aaKnown RBP22.31■■□□□ 1.16
CNEP1R1-210ENST00000568890 CYP27B1O15528 508 aa22.3■■□□□ 1.16
CNEP1R1-210ENST00000568890 U2AF1L5P0DN76 240 aaPredicted RBP22.3■■□□□ 1.16
CNEP1R1-210ENST00000568890 U2AF1Q01081 240 aaKnown RBP eCLIP22.3■■□□□ 1.16
CNEP1R1-210ENST00000568890 LRRC37A3O60309 1634 aa22.3■■□□□ 1.16
CNEP1R1-210ENST00000568890 DIEXFQ68CQ4 756 aaKnown RBP22.3■■□□□ 1.16
CNEP1R1-210ENST00000568890 NUDCQ9Y266 331 aa22.29■■□□□ 1.16
CNEP1R1-210ENST00000568890 PTF1AQ7RTS3 328 aa22.29■■□□□ 1.16
CNEP1R1-210ENST00000568890 PHACTR3Q96KR7 559 aa22.29■■□□□ 1.16
CNEP1R1-210ENST00000568890 RSPH6AQ9H0K4 717 aa22.29■■□□□ 1.16
CNEP1R1-210ENST00000568890 TNS2Q63HR2 1409 aa22.28■■□□□ 1.16
CNEP1R1-210ENST00000568890 WNK3Q9BYP7 1800 aa22.27■■□□□ 1.16
CNEP1R1-210ENST00000568890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.27■■□□□ 1.157e-6■■□□□ 12.8
CNEP1R1-210ENST00000568890 PRKAR2BP31323 418 aa22.25■■□□□ 1.15
CNEP1R1-210ENST00000568890 FAM196AQ6ZSG2 479 aa22.25■■□□□ 1.15
CNEP1R1-210ENST00000568890 FCHSD2O94868 740 aa22.25■■□□□ 1.15
CNEP1R1-210ENST00000568890 UPF1Q92900 1129 aaKnown RBP eCLIP22.24■■□□□ 1.15
CNEP1R1-210ENST00000568890 ADAMTS8Q9UP79 889 aa22.24■■□□□ 1.15
CNEP1R1-210ENST00000568890 KCNQ2O43526 872 aa22.23■■□□□ 1.15
CNEP1R1-210ENST00000568890 MTHFSDQ2M296 383 aaKnown RBP22.23■■□□□ 1.15
CNEP1R1-210ENST00000568890 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
CNEP1R1-210ENST00000568890 PLEKHO1Q53GL0 409 aaPredicted RBP22.23■■□□□ 1.15
CNEP1R1-210ENST00000568890 PLEKHF1Q96S99 279 aa22.23■■□□□ 1.15
CNEP1R1-210ENST00000568890 TRIM37O94972 964 aa22.21■■□□□ 1.15
CNEP1R1-210ENST00000568890 PHKG2P15735 406 aa22.21■■□□□ 1.15
CNEP1R1-210ENST00000568890 ACSBG1Q96GR2 724 aa22.21■■□□□ 1.15
CNEP1R1-210ENST00000568890 PCDH11XQ9BZA7 1347 aa22.21■■□□□ 1.15
CNEP1R1-210ENST00000568890 PCDH11YQ9BZA8 1340 aa22.21■■□□□ 1.15
CNEP1R1-210ENST00000568890 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
CNEP1R1-210ENST00000568890 SHANK3Q9BYB0 1731 aa22.2■■□□□ 1.14
CNEP1R1-210ENST00000568890 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
CNEP1R1-210ENST00000568890 NKX1-1Q15270 411 aaPredicted RBP22.19■■□□□ 1.14
CNEP1R1-210ENST00000568890 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
CNEP1R1-210ENST00000568890 MIER1Q8N108 512 aa22.19■■□□□ 1.14
CNEP1R1-210ENST00000568890 MRS2Q9HD23 443 aa22.19■■□□□ 1.14
CNEP1R1-210ENST00000568890 SOCS7O14512 581 aa22.19■■□□□ 1.14
CNEP1R1-210ENST00000568890 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
CNEP1R1-210ENST00000568890 BCL9O00512 1426 aa22.19■■□□□ 1.14
CNEP1R1-210ENST00000568890 PKD1L3Q7Z443 1732 aa22.16■■□□□ 1.14
CNEP1R1-210ENST00000568890 PRIM1P49642 420 aaKnown RBP22.16■■□□□ 1.14
CNEP1R1-210ENST00000568890 PLEKHG2Q9H7P9 1386 aa22.16■■□□□ 1.14
CNEP1R1-210ENST00000568890 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
CNEP1R1-210ENST00000568890 MPRIPQ6WCQ1 1025 aa22.15■■□□□ 1.14
CNEP1R1-210ENST00000568890 CCDC146Q8IYE0 955 aa22.15■■□□□ 1.14
CNEP1R1-210ENST00000568890 LGR6Q9HBX8 967 aa22.15■■□□□ 1.14
CNEP1R1-210ENST00000568890 AKAP4Q5JQC9 854 aa22.13■■□□□ 1.13
CNEP1R1-210ENST00000568890 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
CNEP1R1-210ENST00000568890 DEFB132Q7Z7B7 95 aa22.12■■□□□ 1.13
CNEP1R1-210ENST00000568890 SYTL4Q96C24 671 aaPredicted RBP22.12■■□□□ 1.13
CNEP1R1-210ENST00000568890 KDM6AO15550 1401 aaPredicted RBP22.11■■□□□ 1.13
CNEP1R1-210ENST00000568890 C1orf141Q5JVX7 400 aa22.11■■□□□ 1.13
CNEP1R1-210ENST00000568890 IL17REQ8NFR9 667 aa22.1■■□□□ 1.13
CNEP1R1-210ENST00000568890 DCAF5Q96JK2 942 aa22.1■■□□□ 1.13
CNEP1R1-210ENST00000568890 APBA3O96018 575 aa22.09■■□□□ 1.13
CNEP1R1-210ENST00000568890 GAS2L2Q8NHY3 880 aa22.09■■□□□ 1.13
CNEP1R1-210ENST00000568890 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
CNEP1R1-210ENST00000568890 CCDC125Q86Z20 511 aa22.08■■□□□ 1.13
CNEP1R1-210ENST00000568890 PIGBQ92521 554 aa22.08■■□□□ 1.13
CNEP1R1-210ENST00000568890 RNMTO43148 476 aaKnown RBP22.08■■□□□ 1.12
CNEP1R1-210ENST00000568890 GNAT3A8MTJ3 354 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 EN1Q05925 392 aaPredicted RBP22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 DCTN1Q14203 1278 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 SBF2Q86WG5 1849 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 KAT6BQ8WYB5 2073 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 PROM2Q8N271 834 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 NFATC2IPQ8NCF5 419 aa22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 RRP7AQ9Y3A4 280 aaKnown RBP22.07■■□□□ 1.12
CNEP1R1-210ENST00000568890 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
CNEP1R1-210ENST00000568890 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
CNEP1R1-210ENST00000568890 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
CNEP1R1-210ENST00000568890 TMPOP42166 694 aaKnown RBP22.05■■□□□ 1.12
CNEP1R1-210ENST00000568890 NFE2L2Q16236 605 aa22.05■■□□□ 1.12
CNEP1R1-210ENST00000568890 ERVV-2B6SEH9 535 aa22.05■■□□□ 1.12
CNEP1R1-210ENST00000568890 MCM10Q7L590 875 aa22.05■■□□□ 1.12
CNEP1R1-210ENST00000568890 CAMKK2Q96RR4 588 aa22.05■■□□□ 1.12
CNEP1R1-210ENST00000568890 TOGARAM1Q9Y4F4 1720 aa22.04■■□□□ 1.12
CNEP1R1-210ENST00000568890 MAP3K5Q99683 1374 aa22.04■■□□□ 1.12
CNEP1R1-210ENST00000568890 APAF1O14727 1248 aa22.03■■□□□ 1.12
CNEP1R1-210ENST00000568890 NEUROD2Q15784 382 aa22.03■■□□□ 1.12
CNEP1R1-210ENST00000568890 EZH2Q15910 746 aaKnown RBP22.03■■□□□ 1.12
CNEP1R1-210ENST00000568890 MAPK8IP3Q9UPT6 1336 aa22.03■■□□□ 1.12
CNEP1R1-210ENST00000568890 SF3B2Q13435 895 aaKnown RBP22.03■■□□□ 1.12
CNEP1R1-210ENST00000568890 ASAP1Q9ULH1 1129 aa22.03■■□□□ 1.12
CNEP1R1-210ENST00000568890 RIPK4P57078 832 aa22.02■■□□□ 1.12
CNEP1R1-210ENST00000568890 PLSCR1O15162 318 aa22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 CABP4P57796 275 aa22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 THUMPD2Q9BTF0 503 aaKnown RBP22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 TMOD3Q9NYL9 352 aa22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 DOT1LQ8TEK3 1739 aa22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 NEFMP07197 916 aa22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 SLC52A2Q9HAB3 445 aa22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
CNEP1R1-210ENST00000568890 TRIM35Q9UPQ4 493 aa22■■□□□ 1.11
CNEP1R1-210ENST00000568890 TNS1Q9HBL0 1735 aaKnown RBP22■■□□□ 1.11
CNEP1R1-210ENST00000568890 NHSQ6T4R5 1651 aa22■■□□□ 1.11
CNEP1R1-210ENST00000568890 BAG6P46379 1132 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms