RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 AEBP1Q8IUX7 1158 aa13.56□□□□□ -0.24
HERPUD1-216ENST00000568814 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
HERPUD1-216ENST00000568814 GLI3P10071 1580 aa13.56□□□□□ -0.24
HERPUD1-216ENST00000568814 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
HERPUD1-216ENST00000568814 MEGF6O75095 1541 aa13.55□□□□□ -0.24
HERPUD1-216ENST00000568814 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
HERPUD1-216ENST00000568814 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
HERPUD1-216ENST00000568814 RBM6P78332 1123 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-216ENST00000568814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.24
HERPUD1-216ENST00000568814 MAPK8IP3Q9UPT6 1336 aa13.54□□□□□ -0.24
HERPUD1-216ENST00000568814 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
HERPUD1-216ENST00000568814 PKD1L3Q7Z443 1732 aa13.53□□□□□ -0.24
HERPUD1-216ENST00000568814 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
HERPUD1-216ENST00000568814 RUNDC1Q96C34 613 aa13.53□□□□□ -0.24
HERPUD1-216ENST00000568814 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
HERPUD1-216ENST00000568814 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-216ENST00000568814 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.25
HERPUD1-216ENST00000568814 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
HERPUD1-216ENST00000568814 TNS2Q63HR2 1409 aa13.52□□□□□ -0.25
HERPUD1-216ENST00000568814 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
HERPUD1-216ENST00000568814 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-216ENST00000568814 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
HERPUD1-216ENST00000568814 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
HERPUD1-216ENST00000568814 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
HERPUD1-216ENST00000568814 A0A0G2JS52 829 aa13.5□□□□□ -0.25
HERPUD1-216ENST00000568814 MYT1Q01538 1121 aa13.5□□□□□ -0.25
HERPUD1-216ENST00000568814 ZCRB1Q8TBF4 217 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-216ENST00000568814 EXOC5O00471 708 aa13.49□□□□□ -0.25
HERPUD1-216ENST00000568814 DDB1Q16531 1140 aa13.49□□□□□ -0.25
HERPUD1-216ENST00000568814 CCDC146Q8IYE0 955 aa13.49□□□□□ -0.25
HERPUD1-216ENST00000568814 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
HERPUD1-216ENST00000568814 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
HERPUD1-216ENST00000568814 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-216ENST00000568814 PHACTR3Q96KR7 559 aa13.48□□□□□ -0.25
HERPUD1-216ENST00000568814 SHANK3Q9BYB0 1731 aa13.47□□□□□ -0.25
HERPUD1-216ENST00000568814 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-216ENST00000568814 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
HERPUD1-216ENST00000568814 MTHFSDQ2M296 383 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-216ENST00000568814 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-216ENST00000568814 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
HERPUD1-216ENST00000568814 MAP3K5Q99683 1374 aa13.46□□□□□ -0.25
HERPUD1-216ENST00000568814 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
HERPUD1-216ENST00000568814 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.25
HERPUD1-216ENST00000568814 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
HERPUD1-216ENST00000568814 APAF1O14727 1248 aa13.45□□□□□ -0.26
HERPUD1-216ENST00000568814 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-216ENST00000568814 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-216ENST00000568814 PDE3BQ13370 1112 aa13.45□□□□□ -0.26
HERPUD1-216ENST00000568814 GNAT3A8MTJ3 354 aa13.44□□□□□ -0.26
HERPUD1-216ENST00000568814 CYP27B1O15528 508 aa13.44□□□□□ -0.26
HERPUD1-216ENST00000568814 PHKG2P15735 406 aa13.44□□□□□ -0.26
HERPUD1-216ENST00000568814 RIPK4P57078 832 aa13.43□□□□□ -0.26
HERPUD1-216ENST00000568814 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-216ENST00000568814 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-216ENST00000568814 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-216ENST00000568814 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
HERPUD1-216ENST00000568814 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
HERPUD1-216ENST00000568814 LRP5O75197 1615 aa13.42□□□□□ -0.26
HERPUD1-216ENST00000568814 BCL9O00512 1426 aa13.42□□□□□ -0.26
HERPUD1-216ENST00000568814 CCDC27Q2M243 656 aa13.42□□□□□ -0.26
HERPUD1-216ENST00000568814 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
HERPUD1-216ENST00000568814 ADAMTS7Q9UKP4 1686 aa13.42□□□□□ -0.26
HERPUD1-216ENST00000568814 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
HERPUD1-216ENST00000568814 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
HERPUD1-216ENST00000568814 MARCH10Q8NA82 808 aaPredicted RBP13.41□□□□□ -0.26
HERPUD1-216ENST00000568814 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-216ENST00000568814 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
HERPUD1-216ENST00000568814 HNRNPUQ00839 825 aaKnown RBP eCLIP13.4□□□□□ -0.26
HERPUD1-216ENST00000568814 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-216ENST00000568814 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
HERPUD1-216ENST00000568814 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
HERPUD1-216ENST00000568814 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
HERPUD1-216ENST00000568814 MRC1P22897 1456 aa13.39□□□□□ -0.27
HERPUD1-216ENST00000568814 EP400Q96L91 3159 aa13.38□□□□□ -0.27
HERPUD1-216ENST00000568814 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
HERPUD1-216ENST00000568814 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
HERPUD1-216ENST00000568814 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
HERPUD1-216ENST00000568814 TRIM35Q9UPQ4 493 aa13.38□□□□□ -0.27
HERPUD1-216ENST00000568814 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-216ENST00000568814 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
HERPUD1-216ENST00000568814 TEFQ10587 303 aa13.37□□□□□ -0.27
HERPUD1-216ENST00000568814 WWC1Q8IX03 1113 aa13.37□□□□□ -0.27
HERPUD1-216ENST00000568814 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
HERPUD1-216ENST00000568814 MCM10Q7L590 875 aa13.36□□□□□ -0.27
HERPUD1-216ENST00000568814 WDR63Q8IWG1 891 aa13.36□□□□□ -0.27
HERPUD1-216ENST00000568814 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
HERPUD1-216ENST00000568814 IL16Q14005 1332 aa13.36□□□□□ -0.27
HERPUD1-216ENST00000568814 ZBED9Q6R2W3 1325 aa13.36□□□□□ -0.27
HERPUD1-216ENST00000568814 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
HERPUD1-216ENST00000568814 CABP4P57796 275 aa13.35□□□□□ -0.27
HERPUD1-216ENST00000568814 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
HERPUD1-216ENST00000568814 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
HERPUD1-216ENST00000568814 ZNF521Q96K83 1311 aa13.35□□□□□ -0.27
HERPUD1-216ENST00000568814 DCTN1Q14203 1278 aa13.34□□□□□ -0.27
HERPUD1-216ENST00000568814 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
HERPUD1-216ENST00000568814 TMOD3Q9NYL9 352 aa13.34□□□□□ -0.27
HERPUD1-216ENST00000568814 SALL2Q9Y467 1007 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-216ENST00000568814 SIPA1L3O60292 1781 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-216ENST00000568814 ITGB4P16144 1822 aa13.34□□□□□ -0.27
HERPUD1-216ENST00000568814 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms