RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
PKM-221ENST00000568743 EXOC5O00471 708 aa13.54□□□□□ -0.24
PKM-221ENST00000568743 PDE3BQ13370 1112 aa13.54□□□□□ -0.24
PKM-221ENST00000568743 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
PKM-221ENST00000568743 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
PKM-221ENST00000568743 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
PKM-221ENST00000568743 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
PKM-221ENST00000568743 KDRP35968 1356 aa13.53□□□□□ -0.24
PKM-221ENST00000568743 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
PKM-221ENST00000568743 MARCH10Q8NA82 808 aaPredicted RBP13.52□□□□□ -0.25
PKM-221ENST00000568743 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
PKM-221ENST00000568743 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
PKM-221ENST00000568743 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
PKM-221ENST00000568743 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.251e-9■□□□□ 8.7
PKM-221ENST00000568743 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
PKM-221ENST00000568743 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
PKM-221ENST00000568743 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
PKM-221ENST00000568743 CYP27B1O15528 508 aa13.48□□□□□ -0.25
PKM-221ENST00000568743 FCHSD2O94868 740 aa13.48□□□□□ -0.25
PKM-221ENST00000568743 PLEKHO1Q53GL0 409 aaPredicted RBP13.48□□□□□ -0.25
PKM-221ENST00000568743 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
PKM-221ENST00000568743 MIER1Q8N108 512 aa13.48□□□□□ -0.25
PKM-221ENST00000568743 AMOTQ4VCS5 1084 aa13.47□□□□□ -0.25
PKM-221ENST00000568743 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
PKM-221ENST00000568743 ADAMTS8Q9UP79 889 aa13.47□□□□□ -0.25
PKM-221ENST00000568743 SHANK3Q9BYB0 1731 aa13.47□□□□□ -0.25
PKM-221ENST00000568743 MTHFSDQ2M296 383 aaKnown RBP13.46□□□□□ -0.25
PKM-221ENST00000568743 FAM196AQ6ZSG2 479 aa13.46□□□□□ -0.25
PKM-221ENST00000568743 CCDC146Q8IYE0 955 aa13.46□□□□□ -0.25
PKM-221ENST00000568743 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
PKM-221ENST00000568743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
PKM-221ENST00000568743 PKD1L3Q7Z443 1732 aa13.46□□□□□ -0.25
PKM-221ENST00000568743 PHKG2P15735 406 aa13.45□□□□□ -0.26
PKM-221ENST00000568743 IFNL2Q8IZJ0 200 aa13.45□□□□□ -0.26
PKM-221ENST00000568743 EP400Q96L91 3159 aa13.45□□□□□ -0.26
PKM-221ENST00000568743 PLEKHG2Q9H7P9 1386 aa13.45□□□□□ -0.26
PKM-221ENST00000568743 TRIM37O94972 964 aa13.44□□□□□ -0.26
PKM-221ENST00000568743 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
PKM-221ENST00000568743 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
PKM-221ENST00000568743 PLEKHF1Q96S99 279 aa13.44□□□□□ -0.26
PKM-221ENST00000568743 PTF1AQ7RTS3 328 aa13.43□□□□□ -0.26
PKM-221ENST00000568743 MAPK8IP3Q9UPT6 1336 aa13.42□□□□□ -0.26
PKM-221ENST00000568743 KCNQ2O43526 872 aa13.42□□□□□ -0.26
PKM-221ENST00000568743 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
PKM-221ENST00000568743 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
PKM-221ENST00000568743 GAS2L2Q8NHY3 880 aa13.42□□□□□ -0.26
PKM-221ENST00000568743 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
PKM-221ENST00000568743 BCL9O00512 1426 aa13.41□□□□□ -0.26
PKM-221ENST00000568743 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
PKM-221ENST00000568743 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
PKM-221ENST00000568743 NEFMP07197 916 aa13.41□□□□□ -0.26
PKM-221ENST00000568743 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
PKM-221ENST00000568743 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
PKM-221ENST00000568743 AKAP4Q5JQC9 854 aa13.41□□□□□ -0.26
PKM-221ENST00000568743 UPF1Q92900 1129 aaKnown RBP eCLIP13.41□□□□□ -0.26
PKM-221ENST00000568743 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
PKM-221ENST00000568743 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
PKM-221ENST00000568743 RUNDC1Q96C34 613 aa13.4□□□□□ -0.26
PKM-221ENST00000568743 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
PKM-221ENST00000568743 RRP7AQ9Y3A4 280 aaKnown RBP13.4□□□□□ -0.26
PKM-221ENST00000568743 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
PKM-221ENST00000568743 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
PKM-221ENST00000568743 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
PKM-221ENST00000568743 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
PKM-221ENST00000568743 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
PKM-221ENST00000568743 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
PKM-221ENST00000568743 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
PKM-221ENST00000568743 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
PKM-221ENST00000568743 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
PKM-221ENST00000568743 TOGARAM1Q9Y4F4 1720 aa13.38□□□□□ -0.27
PKM-221ENST00000568743 APAF1O14727 1248 aa13.37□□□□□ -0.27
PKM-221ENST00000568743 SF3B2Q13435 895 aaKnown RBP13.37□□□□□ -0.27
PKM-221ENST00000568743 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
PKM-221ENST00000568743 MCM10Q7L590 875 aa13.37□□□□□ -0.27
PKM-221ENST00000568743 APBA3O96018 575 aa13.36□□□□□ -0.27
PKM-221ENST00000568743 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
PKM-221ENST00000568743 RIPK4P57078 832 aa13.36□□□□□ -0.27
PKM-221ENST00000568743 DEFB132Q7Z7B7 95 aa13.36□□□□□ -0.27
PKM-221ENST00000568743 IL17REQ8NFR9 667 aa13.36□□□□□ -0.27
PKM-221ENST00000568743 NHSQ6T4R5 1651 aa13.36□□□□□ -0.27
PKM-221ENST00000568743 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
PKM-221ENST00000568743 ERVV-2B6SEH9 535 aa13.35□□□□□ -0.27
PKM-221ENST00000568743 CABP4P57796 275 aa13.35□□□□□ -0.27
PKM-221ENST00000568743 PIGBQ92521 554 aa13.35□□□□□ -0.27
PKM-221ENST00000568743 RTF1Q92541 710 aaKnown RBP13.35□□□□□ -0.27
PKM-221ENST00000568743 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
PKM-221ENST00000568743 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
PKM-221ENST00000568743 TNS1Q9HBL0 1735 aaKnown RBP13.34□□□□□ -0.27
PKM-221ENST00000568743 EN1Q05925 392 aaPredicted RBP13.34□□□□□ -0.27
PKM-221ENST00000568743 CCDC125Q86Z20 511 aa13.34□□□□□ -0.27
PKM-221ENST00000568743 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
PKM-221ENST00000568743 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
PKM-221ENST00000568743 BAG6P46379 1132 aa13.33□□□□□ -0.28
PKM-221ENST00000568743 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
PKM-221ENST00000568743 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
PKM-221ENST00000568743 TEFQ10587 303 aa13.32□□□□□ -0.28
PKM-221ENST00000568743 ASAP1Q9ULH1 1129 aa13.32□□□□□ -0.28
PKM-221ENST00000568743 TRIM35Q9UPQ4 493 aa13.32□□□□□ -0.28
PKM-221ENST00000568743 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
PKM-221ENST00000568743 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms