RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 LRRC37A3O60309 1634 aa15.97■□□□□ 0.15
FANCA-231ENST00000568626 AEBP1Q8IUX7 1158 aa15.97■□□□□ 0.15
FANCA-231ENST00000568626 TNS2Q63HR2 1409 aa15.96■□□□□ 0.15
FANCA-231ENST00000568626 HMOX1P09601 288 aa15.96■□□□□ 0.15
FANCA-231ENST00000568626 TATP17735 454 aaPredicted RBP15.96■□□□□ 0.15
FANCA-231ENST00000568626 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
FANCA-231ENST00000568626 RGS12O14924 1447 aa15.95■□□□□ 0.14
FANCA-231ENST00000568626 NEFMP07197 916 aa15.95■□□□□ 0.14
FANCA-231ENST00000568626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.95■□□□□ 0.147e-10■□□□□ 11.3
FANCA-231ENST00000568626 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
FANCA-231ENST00000568626 FAM98CQ17RN3 349 aaKnown RBP15.94■□□□□ 0.14
FANCA-231ENST00000568626 MAPK8IP3Q9UPT6 1336 aa15.94■□□□□ 0.14
FANCA-231ENST00000568626 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
FANCA-231ENST00000568626 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
FANCA-231ENST00000568626 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
FANCA-231ENST00000568626 SHANK3Q9BYB0 1731 aa15.92■□□□□ 0.14
FANCA-231ENST00000568626 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
FANCA-231ENST00000568626 A0A0G2JS52 829 aa15.91■□□□□ 0.14
FANCA-231ENST00000568626 MYT1Q01538 1121 aa15.91■□□□□ 0.14
FANCA-231ENST00000568626 DDB1Q16531 1140 aa15.91■□□□□ 0.14
FANCA-231ENST00000568626 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
FANCA-231ENST00000568626 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
FANCA-231ENST00000568626 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
FANCA-231ENST00000568626 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
FANCA-231ENST00000568626 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
FANCA-231ENST00000568626 EXOC5O00471 708 aa15.89■□□□□ 0.13
FANCA-231ENST00000568626 SEPT12Q8IYM1 358 aa15.89■□□□□ 0.13
FANCA-231ENST00000568626 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
FANCA-231ENST00000568626 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
FANCA-231ENST00000568626 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
FANCA-231ENST00000568626 SRCAPQ6ZRS2 3230 aa15.87■□□□□ 0.13
FANCA-231ENST00000568626 PDE3BQ13370 1112 aa15.86■□□□□ 0.13
FANCA-231ENST00000568626 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
FANCA-231ENST00000568626 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
FANCA-231ENST00000568626 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
FANCA-231ENST00000568626 HSP90AB1P08238 724 aaKnown RBP15.85■□□□□ 0.13
FANCA-231ENST00000568626 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
FANCA-231ENST00000568626 C1orf141Q5JVX7 400 aa15.85■□□□□ 0.13
FANCA-231ENST00000568626 IFNL2Q8IZJ0 200 aa15.85■□□□□ 0.13
FANCA-231ENST00000568626 PHACTR3Q96KR7 559 aa15.85■□□□□ 0.13
FANCA-231ENST00000568626 MAP3K5Q99683 1374 aa15.85■□□□□ 0.13
FANCA-231ENST00000568626 BCL9O00512 1426 aa15.85■□□□□ 0.13
FANCA-231ENST00000568626 ADAMTS7Q9UKP4 1686 aa15.84■□□□□ 0.13
FANCA-231ENST00000568626 NFE2L2Q16236 605 aa15.84■□□□□ 0.13
FANCA-231ENST00000568626 AKAP4Q5JQC9 854 aa15.84■□□□□ 0.13
FANCA-231ENST00000568626 PHKG2P15735 406 aa15.83■□□□□ 0.12
FANCA-231ENST00000568626 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
FANCA-231ENST00000568626 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
FANCA-231ENST00000568626 KRT27Q7Z3Y8 459 aa15.83■□□□□ 0.12
FANCA-231ENST00000568626 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
FANCA-231ENST00000568626 DLG5Q8TDM6 1919 aa15.83■□□□□ 0.12
FANCA-231ENST00000568626 CYP27B1O15528 508 aa15.82■□□□□ 0.12
FANCA-231ENST00000568626 GNAT3A8MTJ3 354 aa15.81■□□□□ 0.12
FANCA-231ENST00000568626 HTATSF1O43719 755 aaKnown RBP15.81■□□□□ 0.12
FANCA-231ENST00000568626 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
FANCA-231ENST00000568626 NKX1-1Q15270 411 aaPredicted RBP15.81■□□□□ 0.12
FANCA-231ENST00000568626 DDX54Q8TDD1 881 aaKnown RBP15.81■□□□□ 0.12
FANCA-231ENST00000568626 SCN11AQ9UI33 1791 aa15.81■□□□□ 0.12
FANCA-231ENST00000568626 EP400Q96L91 3159 aa15.81■□□□□ 0.12
FANCA-231ENST00000568626 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
FANCA-231ENST00000568626 DOT1LQ8TEK3 1739 aa15.8■□□□□ 0.12
FANCA-231ENST00000568626 APAF1O14727 1248 aa15.8■□□□□ 0.12
FANCA-231ENST00000568626 MARCH10Q8NA82 808 aaPredicted RBP15.8■□□□□ 0.12
FANCA-231ENST00000568626 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
FANCA-231ENST00000568626 TOGARAM1Q9Y4F4 1720 aa15.8■□□□□ 0.12
FANCA-231ENST00000568626 MRC1P22897 1456 aa15.79■□□□□ 0.12
FANCA-231ENST00000568626 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
FANCA-231ENST00000568626 RIPK4P57078 832 aa15.79■□□□□ 0.12
FANCA-231ENST00000568626 RTF1Q92541 710 aaKnown RBP15.79■□□□□ 0.12
FANCA-231ENST00000568626 NHSQ6T4R5 1651 aa15.79■□□□□ 0.12
FANCA-231ENST00000568626 CCDC27Q2M243 656 aa15.78■□□□□ 0.12
FANCA-231ENST00000568626 FAM196AQ6ZSG2 479 aa15.78■□□□□ 0.12
FANCA-231ENST00000568626 CEMIPQ8WUJ3 1361 aa15.77■□□□□ 0.12
FANCA-231ENST00000568626 ERVV-2B6SEH9 535 aa15.76■□□□□ 0.11
FANCA-231ENST00000568626 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
FANCA-231ENST00000568626 SBF2Q86WG5 1849 aa15.75■□□□□ 0.11
FANCA-231ENST00000568626 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
FANCA-231ENST00000568626 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
FANCA-231ENST00000568626 MPRIPQ6WCQ1 1025 aa15.75■□□□□ 0.11
FANCA-231ENST00000568626 SIPA1L3O60292 1781 aaPredicted RBP15.75■□□□□ 0.11
FANCA-231ENST00000568626 ITGB4P16144 1822 aa15.74■□□□□ 0.11
FANCA-231ENST00000568626 RNMTO43148 476 aaKnown RBP15.74■□□□□ 0.11
FANCA-231ENST00000568626 TEFQ10587 303 aa15.73■□□□□ 0.11
FANCA-231ENST00000568626 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
FANCA-231ENST00000568626 MCM10Q7L590 875 aa15.72■□□□□ 0.11
FANCA-231ENST00000568626 IL17REQ8NFR9 667 aa15.72■□□□□ 0.11
FANCA-231ENST00000568626 CABP4P57796 275 aa15.71■□□□□ 0.11
FANCA-231ENST00000568626 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
FANCA-231ENST00000568626 SLC52A2Q9HAB3 445 aa15.71■□□□□ 0.11
FANCA-231ENST00000568626 TMOD3Q9NYL9 352 aa15.71■□□□□ 0.11
FANCA-231ENST00000568626 PAPPAQ13219 1627 aa15.71■□□□□ 0.11
FANCA-231ENST00000568626 FAM182BQ5T319 152 aa15.7■□□□□ 0.1
FANCA-231ENST00000568626 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
FANCA-231ENST00000568626 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
FANCA-231ENST00000568626 TNS1Q9HBL0 1735 aaKnown RBP15.7■□□□□ 0.1
FANCA-231ENST00000568626 BTAF1O14981 1849 aa15.7■□□□□ 0.1
FANCA-231ENST00000568626 IL16Q14005 1332 aa15.69■□□□□ 0.1
FANCA-231ENST00000568626 PRIM1P49642 420 aaKnown RBP15.69■□□□□ 0.1
FANCA-231ENST00000568626 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
FANCA-231ENST00000568626 CCDC125Q86Z20 511 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms