RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PROM2Q8N271 834 aa19.86■□□□□ 0.77
CMTM3-215ENST00000568477 ANKRD26Q9UPS8 1709 aa19.85■□□□□ 0.77
CMTM3-215ENST00000568477 ANO8Q9HCE9 1232 aaPredicted RBP19.85■□□□□ 0.77
CMTM3-215ENST00000568477 TATP17735 454 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-215ENST00000568477 NSD2O96028 1365 aa19.83■□□□□ 0.77
CMTM3-215ENST00000568477 WASHC2AQ641Q2 1341 aa19.83■□□□□ 0.77
CMTM3-215ENST00000568477 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
CMTM3-215ENST00000568477 BTAF1O14981 1849 aa19.83■□□□□ 0.76
CMTM3-215ENST00000568477 TNNT2P45379 298 aaPredicted RBP19.82■□□□□ 0.76
CMTM3-215ENST00000568477 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
CMTM3-215ENST00000568477 MAP2P11137 1827 aaKnown RBP19.81■□□□□ 0.76
CMTM3-215ENST00000568477 STK32BQ9NY57 414 aa19.81■□□□□ 0.76
CMTM3-215ENST00000568477 SYTL4Q96C24 671 aaPredicted RBP19.8■□□□□ 0.76
CMTM3-215ENST00000568477 KIF7Q2M1P5 1343 aa19.79■□□□□ 0.76
CMTM3-215ENST00000568477 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
CMTM3-215ENST00000568477 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
CMTM3-215ENST00000568477 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
CMTM3-215ENST00000568477 PRIM1P49642 420 aaKnown RBP19.79■□□□□ 0.76
CMTM3-215ENST00000568477 KNSTRNQ9Y448 316 aa19.79■□□□□ 0.76
CMTM3-215ENST00000568477 DOT1LQ8TEK3 1739 aa19.79■□□□□ 0.76
CMTM3-215ENST00000568477 SLC15A2Q16348 729 aa19.77■□□□□ 0.76
CMTM3-215ENST00000568477 MORC1Q86VD1 984 aa19.77■□□□□ 0.76
CMTM3-215ENST00000568477 SPON1Q9HCB6 807 aa19.77■□□□□ 0.76
CMTM3-215ENST00000568477 EYA1Q99502 592 aa19.76■□□□□ 0.75
CMTM3-215ENST00000568477 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
CMTM3-215ENST00000568477 SLC27A3Q5K4L6 730 aa19.74■□□□□ 0.75
CMTM3-215ENST00000568477 CASZ1Q86V15 1759 aa19.74■□□□□ 0.75
CMTM3-215ENST00000568477 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
CMTM3-215ENST00000568477 CYP27B1O15528 508 aa19.73■□□□□ 0.75
CMTM3-215ENST00000568477 SPG7Q9UQ90 795 aa19.73■□□□□ 0.75
CMTM3-215ENST00000568477 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
CMTM3-215ENST00000568477 PDGFDQ9GZP0 370 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-215ENST00000568477 LRRC4BQ9NT99 713 aa19.72■□□□□ 0.75
CMTM3-215ENST00000568477 PPP1R1BQ9UD71 204 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-215ENST00000568477 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-215ENST00000568477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.7■□□□□ 0.74
CMTM3-215ENST00000568477 ZBTB7AO95365 584 aa19.69■□□□□ 0.74
CMTM3-215ENST00000568477 ZNF827Q17R98 1081 aa19.69■□□□□ 0.74
CMTM3-215ENST00000568477 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
CMTM3-215ENST00000568477 PLEKHG2Q9H7P9 1386 aa19.68■□□□□ 0.74
CMTM3-215ENST00000568477 CCNL1Q9UK58 526 aaPredicted RBP19.67■□□□□ 0.74
CMTM3-215ENST00000568477 LY75O60449 1722 aa19.67■□□□□ 0.74
CMTM3-215ENST00000568477 KCNQ4P56696 695 aa19.66■□□□□ 0.74
CMTM3-215ENST00000568477 NKX1-1Q15270 411 aaPredicted RBP19.66■□□□□ 0.74
CMTM3-215ENST00000568477 MPRIPQ6WCQ1 1025 aa19.66■□□□□ 0.74
CMTM3-215ENST00000568477 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
CMTM3-215ENST00000568477 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
CMTM3-215ENST00000568477 MTFR1LQ9H019 292 aa19.65■□□□□ 0.74
CMTM3-215ENST00000568477 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-215ENST00000568477 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
CMTM3-215ENST00000568477 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
CMTM3-215ENST00000568477 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
CMTM3-215ENST00000568477 PHKG2P15735 406 aa19.63■□□□□ 0.73
CMTM3-215ENST00000568477 PTGER2P43116 358 aa19.62■□□□□ 0.73
CMTM3-215ENST00000568477 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
CMTM3-215ENST00000568477 SMARCC1Q92922 1105 aaPredicted RBP19.62■□□□□ 0.73
CMTM3-215ENST00000568477 TFCP2L1Q9NZI6 479 aa19.62■□□□□ 0.73
CMTM3-215ENST00000568477 ITGB4P16144 1822 aa19.62■□□□□ 0.73
CMTM3-215ENST00000568477 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-215ENST00000568477 PLEKHO1Q53GL0 409 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-215ENST00000568477 PIGBQ92521 554 aa19.61■□□□□ 0.73
CMTM3-215ENST00000568477 PNPLA7Q6ZV29 1317 aa19.6■□□□□ 0.73
CMTM3-215ENST00000568477 HMGB2P26583 209 aaKnown RBP19.6■□□□□ 0.73
CMTM3-215ENST00000568477 AEBP1Q8IUX7 1158 aa19.6■□□□□ 0.73
CMTM3-215ENST00000568477 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
CMTM3-215ENST00000568477 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
CMTM3-215ENST00000568477 NPC1L1Q9UHC9 1359 aa19.59■□□□□ 0.73
CMTM3-215ENST00000568477 IL13P35225 146 aa19.59■□□□□ 0.73
CMTM3-215ENST00000568477 MTHFSP49914 203 aa19.59■□□□□ 0.73
CMTM3-215ENST00000568477 AMOTQ4VCS5 1084 aa19.59■□□□□ 0.73
CMTM3-215ENST00000568477 SLC16A10Q8TF71 515 aa19.59■□□□□ 0.73
CMTM3-215ENST00000568477 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
CMTM3-215ENST00000568477 SULT6B1Q6IMI4 303 aa19.58■□□□□ 0.72
CMTM3-215ENST00000568477 ZNF530Q6P9A1 599 aaPredicted RBP19.58■□□□□ 0.72
CMTM3-215ENST00000568477 SGIP1Q9BQI5 828 aa19.57■□□□□ 0.72
CMTM3-215ENST00000568477 TUBGCP6Q96RT7 1819 aa19.57■□□□□ 0.72
CMTM3-215ENST00000568477 KDRP35968 1356 aa19.57■□□□□ 0.72
CMTM3-215ENST00000568477 C5P01031 1676 aa19.56■□□□□ 0.72
CMTM3-215ENST00000568477 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
CMTM3-215ENST00000568477 DCAF5Q96JK2 942 aa19.55■□□□□ 0.72
CMTM3-215ENST00000568477 ERVV-2B6SEH9 535 aa19.54■□□□□ 0.72
CMTM3-215ENST00000568477 C1orf141Q5JVX7 400 aa19.54■□□□□ 0.72
CMTM3-215ENST00000568477 ARXQ96QS3 562 aa19.54■□□□□ 0.72
CMTM3-215ENST00000568477 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
CMTM3-215ENST00000568477 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
CMTM3-215ENST00000568477 MSH5O43196 834 aa19.53■□□□□ 0.72
CMTM3-215ENST00000568477 SIK1P57059 783 aa19.53■□□□□ 0.72
CMTM3-215ENST00000568477 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
CMTM3-215ENST00000568477 DIAPH1O60610 1272 aaKnown RBP19.52■□□□□ 0.72
CMTM3-215ENST00000568477 POLD1P28340 1107 aa19.52■□□□□ 0.72
CMTM3-215ENST00000568477 FHDC1Q9C0D6 1143 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-215ENST00000568477 TAF1LQ8IZX4 1826 aa19.52■□□□□ 0.72
CMTM3-215ENST00000568477 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-215ENST00000568477 COL23A1Q86Y22 540 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-215ENST00000568477 FLAD1Q8NFF5 587 aa19.51■□□□□ 0.71
CMTM3-215ENST00000568477 AK7Q96M32 723 aa19.51■□□□□ 0.71
CMTM3-215ENST00000568477 CABP4P57796 275 aa19.5■□□□□ 0.71
CMTM3-215ENST00000568477 SYT17Q9BSW7 474 aa19.5■□□□□ 0.71
CMTM3-215ENST00000568477 ATG3Q9NT62 314 aa19.5■□□□□ 0.71
CMTM3-215ENST00000568477 C4BP0C0L5 1744 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms