RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 NAP1L1P55209 391 aaKnown RBP12.57□□□□□ -0.4
FANCA-230ENST00000568369 SMARCE1Q969G3 411 aa12.57□□□□□ -0.4
FANCA-230ENST00000568369 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■■■■ 30.6
FANCA-230ENST00000568369 MAP3K11Q16584 847 aa12.57□□□□□ -0.4
FANCA-230ENST00000568369 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
FANCA-230ENST00000568369 NUTM1Q86Y26 1132 aa12.57□□□□□ -0.4
FANCA-230ENST00000568369 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
FANCA-230ENST00000568369 PIP4K2AP48426 406 aaPredicted RBP12.57□□□□□ -0.4
FANCA-230ENST00000568369 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 TTC39AQ5SRH9 613 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 IL16Q14005 1332 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 FYB1O15117 783 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 KDM4AO75164 1064 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 SLC26A8Q96RN1 970 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
FANCA-230ENST00000568369 CDR1P51861 262 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
FANCA-230ENST00000568369 TBC1D9Q6ZT07 1266 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 TRIM22Q8IYM9 498 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 MIS18AQ9NYP9 233 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 PARD3Q8TEW0 1356 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 KIF6Q6ZMV9 814 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 OFD1O75665 1012 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 TXLNAP40222 546 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 HDAC1Q13547 482 aaPredicted RBP12.55□□□□□ -0.4
FANCA-230ENST00000568369 RRP12Q5JTH9 1297 aaKnown RBP12.55□□□□□ -0.4
FANCA-230ENST00000568369 CTNNA3Q9UI47 895 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 FAM135AQ9P2D6 1515 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
FANCA-230ENST00000568369 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
FANCA-230ENST00000568369 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
FANCA-230ENST00000568369 FILIP1Q7Z7B0 1213 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 CAGE1Q8TC20 777 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 RBM33Q96EV2 1170 aaKnown RBP12.54□□□□□ -0.4
FANCA-230ENST00000568369 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
FANCA-230ENST00000568369 DACH1Q9UI36 760 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
FANCA-230ENST00000568369 MYL6BP14649 208 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 NME9Q86XW9 330 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 SCAND2PQ9GZW5 306 aaPredicted RBP12.54□□□□□ -0.4
FANCA-230ENST00000568369 CEP126Q9P2H0 1117 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 PCDHB15Q9Y5E8 787 aa12.54□□□□□ -0.4
FANCA-230ENST00000568369 PTPRCP08575 1304 aa12.53□□□□□ -0.4
FANCA-230ENST00000568369 UGGT2Q9NYU1 1516 aa12.53□□□□□ -0.4
FANCA-230ENST00000568369 C14orf93Q9H972 538 aaKnown RBP12.53□□□□□ -0.4
FANCA-230ENST00000568369 SPG7Q9UQ90 795 aa12.53□□□□□ -0.4
FANCA-230ENST00000568369 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
FANCA-230ENST00000568369 CABP4P57796 275 aa12.53□□□□□ -0.4
FANCA-230ENST00000568369 NACAP1Q9BZK3 213 aa12.53□□□□□ -0.4
FANCA-230ENST00000568369 TCEAL9Q9UHQ7 104 aa12.53□□□□□ -0.4
FANCA-230ENST00000568369 CDKL5O76039 1030 aa12.52□□□□□ -0.4
FANCA-230ENST00000568369 BAG4O95429 457 aaKnown RBP12.52□□□□□ -0.4
FANCA-230ENST00000568369 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.4
FANCA-230ENST00000568369 CCDC57Q2TAC2 916 aa12.52□□□□□ -0.4
FANCA-230ENST00000568369 ZSCAN25Q6NSZ9 544 aa12.52□□□□□ -0.4
FANCA-230ENST00000568369 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.4
FANCA-230ENST00000568369 F6X3S4 739 aa12.52□□□□□ -0.41
FANCA-230ENST00000568369 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
FANCA-230ENST00000568369 PROSER2Q86WR7 435 aaPredicted RBP12.52□□□□□ -0.41
FANCA-230ENST00000568369 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.41
FANCA-230ENST00000568369 FKBP4Q02790 459 aaKnown RBP eCLIP12.52□□□□□ -0.41
FANCA-230ENST00000568369 C8orf34Q49A92 452 aa12.52□□□□□ -0.41
FANCA-230ENST00000568369 PPFIBP1Q86W92 1011 aa12.52□□□□□ -0.41
FANCA-230ENST00000568369 LIMCH1Q9UPQ0 1083 aa12.52□□□□□ -0.41
FANCA-230ENST00000568369 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
FANCA-230ENST00000568369 ARHGAP45Q92619 1136 aa12.51□□□□□ -0.41
FANCA-230ENST00000568369 MAGEC2Q9UBF1 373 aaPredicted RBP12.51□□□□□ -0.41
FANCA-230ENST00000568369 NOS1P29475 1434 aa12.51□□□□□ -0.41
FANCA-230ENST00000568369 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
FANCA-230ENST00000568369 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
FANCA-230ENST00000568369 ADGRL1O94910 1474 aa12.51□□□□□ -0.41
FANCA-230ENST00000568369 EPS15P42566 896 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 IDI1Q13907 227 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 ANKRD36BQ8N2N9 1353 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 SMTNL1A8MU46 457 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 NUCB1Q02818 461 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 LRRFIP2Q9Y608 721 aaKnown RBP12.5□□□□□ -0.41
FANCA-230ENST00000568369 ASXL1Q8IXJ9 1541 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 NUP160Q12769 1436 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
FANCA-230ENST00000568369 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
FANCA-230ENST00000568369 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 TTC22Q5TAA0 569 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 PDCL2Q8N4E4 241 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
FANCA-230ENST00000568369 WASLO00401 505 aaPredicted RBP12.49□□□□□ -0.41
FANCA-230ENST00000568369 PKNOX2Q96KN3 472 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
FANCA-230ENST00000568369 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 MCM5P33992 734 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms