RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 LMO7Q8WWI1 1683 aa6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 GTPBP6O43824 516 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 NKX1-1Q15270 411 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 CARD10Q9BWT7 1032 aa6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 SLC12A5Q9H2X9 1139 aa6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 NLRP2Q9NX02 1062 aa6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 AXIN2Q9Y2T1 843 aa6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 PARP4Q9UKK3 1724 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 SBNO2Q9Y2G9 1366 aa6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 PIK3C2AO00443 1686 aa6.52□□□□□ -1.37
HERPUD1-213ENST00000568358 OVOS2A0A0G2JMS6 1433 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 OVOS2A0A0J9YW53 1432 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 DISP2A7MBM2 1401 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 CPSF1Q10570 1443 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 OVOS2Q6IE36 1432 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 SLIT3O75094 1523 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 TNS1Q9HBL0 1735 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 ST20-MTHFSA0A0A6YYL1 179 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 CDCA8Q53HL2 280 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 LHX8Q68G74 356 aa6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 BCL11BQ9C0K0 894 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-213ENST00000568358 MON2Q7Z3U7 1717 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 SBF2Q86WG5 1849 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 COL18A1P39060 1754 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 CCDC7Q96M83 1385 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 NINLQ9Y2I6 1382 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 PLSCR1O15162 318 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 TMF1P82094 1093 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 NME9Q86XW9 330 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 COG3Q96JB2 828 aa6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 PPP1R1BQ9UD71 204 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 EDC4Q6P2E9 1401 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-213ENST00000568358 LTN1O94822 1766 aa6.49□□□□□ -1.37
HERPUD1-213ENST00000568358 USP31Q70CQ4 1352 aa6.49□□□□□ -1.37
HERPUD1-213ENST00000568358 IL2RBP14784 551 aa6.49□□□□□ -1.37
HERPUD1-213ENST00000568358 AMPHP49418 695 aa6.49□□□□□ -1.37
HERPUD1-213ENST00000568358 LRP5O75197 1615 aa6.49□□□□□ -1.37
HERPUD1-213ENST00000568358 MARCH10Q8NA82 808 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 ANKRD24Q8TF21 1146 aa6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 IP6K1Q92551 441 aa6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 LTV1Q96GA3 475 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 PCGF6Q9BYE7 350 aa6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 SPON1Q9HCB6 807 aa6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 WNK3Q9BYP7 1800 aa6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 ERBB3P21860 1342 aa6.48□□□□□ -1.37
HERPUD1-213ENST00000568358 A0A1W2PP64 1363 aa6.47□□□□□ -1.37
HERPUD1-213ENST00000568358 ABCC6O95255 1503 aa6.47□□□□□ -1.37
HERPUD1-213ENST00000568358 KCNQ2O43526 872 aa6.47□□□□□ -1.37
HERPUD1-213ENST00000568358 MNX1P50219 401 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-213ENST00000568358 TESK2Q96S53 571 aa6.47□□□□□ -1.37
HERPUD1-213ENST00000568358 STK32BQ9NY57 414 aa6.47□□□□□ -1.37
HERPUD1-213ENST00000568358 LRRC37A3O60309 1634 aa6.47□□□□□ -1.37
HERPUD1-213ENST00000568358 NFAT5O94916 1531 aa6.46□□□□□ -1.37
HERPUD1-213ENST00000568358 RREB1Q92766 1687 aa6.46□□□□□ -1.37
HERPUD1-213ENST00000568358 BCL9O00512 1426 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 POTEIP0CG38 1075 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 HMGB2P26583 209 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 NUP188Q5SRE5 1749 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 SRCAPQ6ZRS2 3230 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 DDX54Q8TDD1 881 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 ACSBG1Q96GR2 724 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 ZMYND15Q9H091 742 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 RGPD3A6NKT7 1758 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 RGPD4Q7Z3J3 1758 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 CD163L1Q9NR16 1453 aa6.46□□□□□ -1.38
HERPUD1-213ENST00000568358 USP54Q70EL1 1684 aa6.45□□□□□ -1.38
HERPUD1-213ENST00000568358 ANKRD36BQ8N2N9 1353 aa6.45□□□□□ -1.38
HERPUD1-213ENST00000568358 USP47Q96K76 1375 aa6.45□□□□□ -1.38
HERPUD1-213ENST00000568358 PEAK1Q9H792 1746 aa6.45□□□□□ -1.38
HERPUD1-213ENST00000568358 TXNRD1Q16881 649 aa6.45□□□□□ -1.38
HERPUD1-213ENST00000568358 SYTL4Q96C24 671 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-213ENST00000568358 CLSPNQ9HAW4 1339 aa6.45□□□□□ -1.38
HERPUD1-213ENST00000568358 SMG6Q86US8 1419 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 FYB1O15117 783 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 HOXC9P31274 260 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 SLC15A2Q16348 729 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 PTF1AQ7RTS3 328 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 ZCRB1Q8TBF4 217 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 RAPGEF4Q8WZA2 1011 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 RNF25Q96BH1 459 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 POLR3GLQ9BT43 218 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 RSPH6AQ9H0K4 717 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 GGNBP2Q9H3C7 697 aa6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 FAM208AQ9UK61 1670 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-213ENST00000568358 TNS2Q63HR2 1409 aa6.43□□□□□ -1.38
HERPUD1-213ENST00000568358 GALR2O43603 387 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-213ENST00000568358 RRS1Q15050 365 aaKnown RBP6.43□□□□□ -1.38
HERPUD1-213ENST00000568358 SLC27A3Q5K4L6 730 aa6.43□□□□□ -1.38
HERPUD1-213ENST00000568358 CCER1Q8TC90 406 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-213ENST00000568358 CGNL1Q0VF96 1302 aa6.43□□□□□ -1.38
HERPUD1-213ENST00000568358 MAP3K19Q56UN5 1328 aa6.43□□□□□ -1.38
HERPUD1-213ENST00000568358 RGPD2P0DJD1 1756 aa6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 BTAF1O14981 1849 aa6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 MAP2P11137 1827 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 PPM1GO15355 546 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 ZBTB7AO95365 584 aa6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 TATP17735 454 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 FBLN1P23142 703 aa6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 PHF12Q96QT6 1004 aa6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 NHSQ6T4R5 1651 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms