RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
TSC2-220ENST00000568238 NBPF6Q5VWK0 638 aa17.79■□□□□ 0.44
TSC2-220ENST00000568238 USHBP1Q8N6Y0 703 aa17.79■□□□□ 0.44
TSC2-220ENST00000568238 NBPF4Q96M43 638 aa17.79■□□□□ 0.44
TSC2-220ENST00000568238 SPON1Q9HCB6 807 aa17.79■□□□□ 0.44
TSC2-220ENST00000568238 STK32BQ9NY57 414 aa17.79■□□□□ 0.44
TSC2-220ENST00000568238 ZCRB1Q8TBF4 217 aaKnown RBP17.78■□□□□ 0.44
TSC2-220ENST00000568238 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
TSC2-220ENST00000568238 PKD1L3Q7Z443 1732 aa17.78■□□□□ 0.44
TSC2-220ENST00000568238 ZEB1P37275 1124 aaPredicted RBP17.77■□□□□ 0.44
TSC2-220ENST00000568238 RAPGEF4Q8WZA2 1011 aa17.77■□□□□ 0.44
TSC2-220ENST00000568238 LY75O60449 1722 aa17.77■□□□□ 0.44
TSC2-220ENST00000568238 SLC15A2Q16348 729 aa17.76■□□□□ 0.43
TSC2-220ENST00000568238 QSER1Q2KHR3 1735 aa17.75■□□□□ 0.43
TSC2-220ENST00000568238 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
TSC2-220ENST00000568238 SYTL4Q96C24 671 aaPredicted RBP17.75■□□□□ 0.43
TSC2-220ENST00000568238 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
TSC2-220ENST00000568238 NCAPD2Q15021 1401 aa17.74■□□□□ 0.43
TSC2-220ENST00000568238 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
TSC2-220ENST00000568238 NSD2O96028 1365 aa17.74■□□□□ 0.43
TSC2-220ENST00000568238 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
TSC2-220ENST00000568238 PDGFDQ9GZP0 370 aaPredicted RBP17.73■□□□□ 0.43
TSC2-220ENST00000568238 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
TSC2-220ENST00000568238 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
TSC2-220ENST00000568238 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
TSC2-220ENST00000568238 ZBTB7AO95365 584 aa17.72■□□□□ 0.43
TSC2-220ENST00000568238 PRIM1P49642 420 aaKnown RBP17.72■□□□□ 0.43
TSC2-220ENST00000568238 ITGB4P16144 1822 aa17.71■□□□□ 0.43
TSC2-220ENST00000568238 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
TSC2-220ENST00000568238 WASHC2AQ641Q2 1341 aa17.71■□□□□ 0.42
TSC2-220ENST00000568238 PANK3Q9H999 370 aa17.7■□□□□ 0.42
TSC2-220ENST00000568238 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
TSC2-220ENST00000568238 ZNF827Q17R98 1081 aa17.69■□□□□ 0.42
TSC2-220ENST00000568238 POLKQ9UBT6 870 aa17.69■□□□□ 0.42
TSC2-220ENST00000568238 TNNT2P45379 298 aaPredicted RBP17.68■□□□□ 0.42
TSC2-220ENST00000568238 UTRNP46939 3433 aa17.68■□□□□ 0.42
TSC2-220ENST00000568238 C5P01031 1676 aa17.67■□□□□ 0.42
TSC2-220ENST00000568238 MTFR1LQ9H019 292 aa17.67■□□□□ 0.42
TSC2-220ENST00000568238 PTGER2P43116 358 aa17.66■□□□□ 0.42
TSC2-220ENST00000568238 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
TSC2-220ENST00000568238 TAF1LQ8IZX4 1826 aa17.65■□□□□ 0.42
TSC2-220ENST00000568238 CYP27B1O15528 508 aa17.65■□□□□ 0.42
TSC2-220ENST00000568238 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
TSC2-220ENST00000568238 EYA1Q99502 592 aa17.65■□□□□ 0.42
TSC2-220ENST00000568238 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
TSC2-220ENST00000568238 CCNL1Q9UK58 526 aaPredicted RBP17.64■□□□□ 0.41
TSC2-220ENST00000568238 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
TSC2-220ENST00000568238 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.41
TSC2-220ENST00000568238 KCNQ4P56696 695 aa17.63■□□□□ 0.41
TSC2-220ENST00000568238 PLEKHG2Q9H7P9 1386 aa17.63■□□□□ 0.41
TSC2-220ENST00000568238 KNSTRNQ9Y448 316 aa17.62■□□□□ 0.41
TSC2-220ENST00000568238 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
TSC2-220ENST00000568238 GOLGB1Q14789 3259 aaKnown RBP17.61■□□□□ 0.41
TSC2-220ENST00000568238 MPRIPQ6WCQ1 1025 aa17.61■□□□□ 0.41
TSC2-220ENST00000568238 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
TSC2-220ENST00000568238 SGIP1Q9BQI5 828 aa17.61■□□□□ 0.41
TSC2-220ENST00000568238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.61■□□□□ 0.41
TSC2-220ENST00000568238 TFCP2L1Q9NZI6 479 aa17.61■□□□□ 0.41
TSC2-220ENST00000568238 PALLDQ8WX93 1383 aa17.61■□□□□ 0.41
TSC2-220ENST00000568238 PNPLA7Q6ZV29 1317 aa17.6■□□□□ 0.41
TSC2-220ENST00000568238 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
TSC2-220ENST00000568238 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
TSC2-220ENST00000568238 NKX1-1Q15270 411 aaPredicted RBP17.59■□□□□ 0.41
TSC2-220ENST00000568238 C4BP0C0L5 1744 aa17.58■□□□□ 0.41
TSC2-220ENST00000568238 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
TSC2-220ENST00000568238 SMARCC1Q92922 1105 aaPredicted RBP17.57■□□□□ 0.4
TSC2-220ENST00000568238 ARXQ96QS3 562 aa17.57■□□□□ 0.4
TSC2-220ENST00000568238 FHDC1Q9C0D6 1143 aaPredicted RBP17.57■□□□□ 0.4
TSC2-220ENST00000568238 PHKG2P15735 406 aa17.56■□□□□ 0.4
TSC2-220ENST00000568238 HMGB2P26583 209 aaKnown RBP17.56■□□□□ 0.4
TSC2-220ENST00000568238 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
TSC2-220ENST00000568238 IFNL2Q8IZJ0 200 aa17.56■□□□□ 0.4
TSC2-220ENST00000568238 MAP3K5Q99683 1374 aa17.55■□□□□ 0.4
TSC2-220ENST00000568238 UBR3Q6ZT12 1888 aa17.55■□□□□ 0.4
TSC2-220ENST00000568238 PIGBQ92521 554 aa17.55■□□□□ 0.4
TSC2-220ENST00000568238 TMOD3Q9NYL9 352 aa17.55■□□□□ 0.4
TSC2-220ENST00000568238 POLD1P28340 1107 aa17.54■□□□□ 0.4
TSC2-220ENST00000568238 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
TSC2-220ENST00000568238 MSH5O43196 834 aa17.52■□□□□ 0.4
TSC2-220ENST00000568238 PLEKHO1Q53GL0 409 aaPredicted RBP17.51■□□□□ 0.39
TSC2-220ENST00000568238 AEBP1Q8IUX7 1158 aa17.51■□□□□ 0.39
TSC2-220ENST00000568238 KDRP35968 1356 aa17.51■□□□□ 0.39
TSC2-220ENST00000568238 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
TSC2-220ENST00000568238 YY1P25490 414 aa17.5■□□□□ 0.39
TSC2-220ENST00000568238 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
TSC2-220ENST00000568238 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
TSC2-220ENST00000568238 COL23A1Q86Y22 540 aaPredicted RBP17.5■□□□□ 0.39
TSC2-220ENST00000568238 AK7Q96M32 723 aa17.5■□□□□ 0.39
TSC2-220ENST00000568238 ZNF831Q5JPB2 1677 aa17.5■□□□□ 0.39
TSC2-220ENST00000568238 CHD4Q14839 1912 aa17.5■□□□□ 0.39
TSC2-220ENST00000568238 KDM6AO15550 1401 aaPredicted RBP17.49■□□□□ 0.39
TSC2-220ENST00000568238 SCN11AQ9UI33 1791 aa17.49■□□□□ 0.39
TSC2-220ENST00000568238 LOC102724428A0A0B4J2F2 783 aa17.49■□□□□ 0.39
TSC2-220ENST00000568238 SIK1P57059 783 aa17.49■□□□□ 0.39
TSC2-220ENST00000568238 FLAD1Q8NFF5 587 aa17.49■□□□□ 0.39
TSC2-220ENST00000568238 ASAP1Q9ULH1 1129 aa17.49■□□□□ 0.39
TSC2-220ENST00000568238 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
TSC2-220ENST00000568238 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
TSC2-220ENST00000568238 IL13P35225 146 aa17.48■□□□□ 0.39
TSC2-220ENST00000568238 SULT6B1Q6IMI4 303 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms