RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 PRKAR2BP31323 418 aa20.9■□□□□ 0.94
SPG7-218ENST00000568205 MYT1Q01538 1121 aa20.9■□□□□ 0.94
SPG7-218ENST00000568205 SEPT12Q8IYM1 358 aa20.89■□□□□ 0.93
SPG7-218ENST00000568205 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
SPG7-218ENST00000568205 THSD7AQ9UPZ6 1657 aa20.88■□□□□ 0.93
SPG7-218ENST00000568205 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
SPG7-218ENST00000568205 DDB1Q16531 1140 aa20.86■□□□□ 0.93
SPG7-218ENST00000568205 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
SPG7-218ENST00000568205 ZCRB1Q8TBF4 217 aaKnown RBP20.86■□□□□ 0.93
SPG7-218ENST00000568205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.86■□□□□ 0.933e-9■■□□□ 13.2
SPG7-218ENST00000568205 RGS12O14924 1447 aa20.86■□□□□ 0.93
SPG7-218ENST00000568205 TNS2Q63HR2 1409 aa20.86■□□□□ 0.93
SPG7-218ENST00000568205 WNK3Q9BYP7 1800 aa20.85■□□□□ 0.93
SPG7-218ENST00000568205 EXOC5O00471 708 aa20.85■□□□□ 0.93
SPG7-218ENST00000568205 AMOTQ4VCS5 1084 aa20.85■□□□□ 0.93
SPG7-218ENST00000568205 PHACTR3Q96KR7 559 aa20.85■□□□□ 0.93
SPG7-218ENST00000568205 PLEKHF1Q96S99 279 aa20.85■□□□□ 0.93
SPG7-218ENST00000568205 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
SPG7-218ENST00000568205 PARP4Q9UKK3 1724 aaKnown RBP20.84■□□□□ 0.93
SPG7-218ENST00000568205 NEFMP07197 916 aa20.84■□□□□ 0.93
SPG7-218ENST00000568205 CCDC146Q8IYE0 955 aa20.84■□□□□ 0.93
SPG7-218ENST00000568205 MAPK8IP3Q9UPT6 1336 aa20.83■□□□□ 0.93
SPG7-218ENST00000568205 RUNDC1Q96C34 613 aa20.83■□□□□ 0.93
SPG7-218ENST00000568205 LRRC37A3O60309 1634 aa20.82■□□□□ 0.92
SPG7-218ENST00000568205 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
SPG7-218ENST00000568205 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
SPG7-218ENST00000568205 PDE3BQ13370 1112 aa20.81■□□□□ 0.92
SPG7-218ENST00000568205 MTHFSDQ2M296 383 aaKnown RBP20.81■□□□□ 0.92
SPG7-218ENST00000568205 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
SPG7-218ENST00000568205 GAS2L2Q8NHY3 880 aa20.8■□□□□ 0.92
SPG7-218ENST00000568205 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
SPG7-218ENST00000568205 PKD1L3Q7Z443 1732 aa20.79■□□□□ 0.92
SPG7-218ENST00000568205 CYP27B1O15528 508 aa20.79■□□□□ 0.92
SPG7-218ENST00000568205 KRT27Q7Z3Y8 459 aa20.78■□□□□ 0.92
SPG7-218ENST00000568205 MARCH10Q8NA82 808 aaPredicted RBP20.78■□□□□ 0.92
SPG7-218ENST00000568205 PHKG2P15735 406 aa20.77■□□□□ 0.92
SPG7-218ENST00000568205 NFE2L2Q16236 605 aa20.77■□□□□ 0.92
SPG7-218ENST00000568205 IFNL2Q8IZJ0 200 aa20.77■□□□□ 0.92
SPG7-218ENST00000568205 C1orf141Q5JVX7 400 aa20.76■□□□□ 0.91
SPG7-218ENST00000568205 APAF1O14727 1248 aa20.75■□□□□ 0.91
SPG7-218ENST00000568205 AKAP4Q5JQC9 854 aa20.75■□□□□ 0.91
SPG7-218ENST00000568205 TMPOP42166 694 aaKnown RBP20.74■□□□□ 0.91
SPG7-218ENST00000568205 MAP3K5Q99683 1374 aa20.73■□□□□ 0.91
SPG7-218ENST00000568205 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
SPG7-218ENST00000568205 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
SPG7-218ENST00000568205 NKX1-1Q15270 411 aaPredicted RBP20.73■□□□□ 0.91
SPG7-218ENST00000568205 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
SPG7-218ENST00000568205 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
SPG7-218ENST00000568205 FAM182BQ5T319 152 aa20.72■□□□□ 0.91
SPG7-218ENST00000568205 RIPK4P57078 832 aa20.71■□□□□ 0.91
SPG7-218ENST00000568205 NEUROD2Q15784 382 aa20.7■□□□□ 0.9
SPG7-218ENST00000568205 MPRIPQ6WCQ1 1025 aa20.7■□□□□ 0.9
SPG7-218ENST00000568205 DCAF5Q96JK2 942 aa20.7■□□□□ 0.9
SPG7-218ENST00000568205 BCL9O00512 1426 aa20.7■□□□□ 0.9
SPG7-218ENST00000568205 KDM6AO15550 1401 aaPredicted RBP20.7■□□□□ 0.9
SPG7-218ENST00000568205 BRWD3Q6RI45 1802 aa20.69■□□□□ 0.9
SPG7-218ENST00000568205 HTATSF1O43719 755 aaKnown RBP20.69■□□□□ 0.9
SPG7-218ENST00000568205 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
SPG7-218ENST00000568205 LMOD3Q0VAK6 560 aa20.68■□□□□ 0.9
SPG7-218ENST00000568205 FAM196AQ6ZSG2 479 aa20.68■□□□□ 0.9
SPG7-218ENST00000568205 RTF1Q92541 710 aaKnown RBP20.68■□□□□ 0.9
SPG7-218ENST00000568205 RNMTO43148 476 aaKnown RBP20.67■□□□□ 0.9
SPG7-218ENST00000568205 IL17REQ8NFR9 667 aa20.66■□□□□ 0.9
SPG7-218ENST00000568205 LGR6Q9HBX8 967 aa20.66■□□□□ 0.9
SPG7-218ENST00000568205 NCBP3Q53F19 620 aaKnown RBP20.65■□□□□ 0.9
SPG7-218ENST00000568205 MCM10Q7L590 875 aa20.65■□□□□ 0.9
SPG7-218ENST00000568205 TRIM35Q9UPQ4 493 aa20.65■□□□□ 0.9
SPG7-218ENST00000568205 CEMIPQ8WUJ3 1361 aa20.64■□□□□ 0.89
SPG7-218ENST00000568205 ERVV-2B6SEH9 535 aa20.64■□□□□ 0.89
SPG7-218ENST00000568205 DCTN1Q14203 1278 aa20.64■□□□□ 0.89
SPG7-218ENST00000568205 NGEFQ8N5V2 710 aa20.64■□□□□ 0.89
SPG7-218ENST00000568205 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
SPG7-218ENST00000568205 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
SPG7-218ENST00000568205 ADAMTS7Q9UKP4 1686 aa20.62■□□□□ 0.89
SPG7-218ENST00000568205 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
SPG7-218ENST00000568205 THUMPD2Q9BTF0 503 aaKnown RBP20.62■□□□□ 0.89
SPG7-218ENST00000568205 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
SPG7-218ENST00000568205 CABP4P57796 275 aa20.61■□□□□ 0.89
SPG7-218ENST00000568205 ILDR2Q71H61 639 aa20.61■□□□□ 0.89
SPG7-218ENST00000568205 SYTL4Q96C24 671 aaPredicted RBP20.61■□□□□ 0.89
SPG7-218ENST00000568205 SLC52A2Q9HAB3 445 aa20.61■□□□□ 0.89
SPG7-218ENST00000568205 MRC1P22897 1456 aa20.61■□□□□ 0.89
SPG7-218ENST00000568205 KCNQ2O43526 872 aa20.6■□□□□ 0.89
SPG7-218ENST00000568205 TEFQ10587 303 aa20.6■□□□□ 0.89
SPG7-218ENST00000568205 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
SPG7-218ENST00000568205 TOGARAM1Q9Y4F4 1720 aa20.6■□□□□ 0.89
SPG7-218ENST00000568205 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
SPG7-218ENST00000568205 WWC1Q8IX03 1113 aa20.59■□□□□ 0.89
SPG7-218ENST00000568205 TRIM37O94972 964 aa20.58■□□□□ 0.89
SPG7-218ENST00000568205 PTF1AQ7RTS3 328 aa20.58■□□□□ 0.89
SPG7-218ENST00000568205 NFATC2IPQ8NCF5 419 aa20.58■□□□□ 0.89
SPG7-218ENST00000568205 PIGBQ92521 554 aa20.58■□□□□ 0.89
SPG7-218ENST00000568205 BCL11BQ9C0K0 894 aaPredicted RBP20.58■□□□□ 0.89
SPG7-218ENST00000568205 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.88
SPG7-218ENST00000568205 DLG5Q8TDM6 1919 aa20.57■□□□□ 0.88
SPG7-218ENST00000568205 SCN11AQ9UI33 1791 aa20.57■□□□□ 0.88
SPG7-218ENST00000568205 CALD1Q05682 793 aaKnown RBP20.56■□□□□ 0.88
SPG7-218ENST00000568205 NHSQ6T4R5 1651 aa20.56■□□□□ 0.88
SPG7-218ENST00000568205 TAF7Q15545 349 aaPredicted RBP20.55■□□□□ 0.88
SPG7-218ENST00000568205 ZNF521Q96K83 1311 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 411.7 ms