RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 COL14A1Q05707 1796 aaKnown RBP13.66□□□□□ -0.22
TCF4-236ENST00000567880 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
TCF4-236ENST00000567880 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
TCF4-236ENST00000567880 ADAMTS2O95450 1211 aa13.65□□□□□ -0.22
TCF4-236ENST00000567880 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
TCF4-236ENST00000567880 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
TCF4-236ENST00000567880 SLFN5Q08AF3 891 aa13.64□□□□□ -0.23
TCF4-236ENST00000567880 MTHFSDQ2M296 383 aaKnown RBP13.64□□□□□ -0.23
TCF4-236ENST00000567880 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
TCF4-236ENST00000567880 VIRMAQ69YN4 1812 aaKnown RBP13.64□□□□□ -0.23
TCF4-236ENST00000567880 EVA1CP58658 441 aa13.64□□□□□ -0.23
TCF4-236ENST00000567880 WDR63Q8IWG1 891 aa13.64□□□□□ -0.23
TCF4-236ENST00000567880 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
TCF4-236ENST00000567880 E9PSI1 815 aa13.63□□□□□ -0.23
TCF4-236ENST00000567880 LMOD3Q0VAK6 560 aa13.63□□□□□ -0.23
TCF4-236ENST00000567880 DUSP27Q5VZP5 1158 aa13.63□□□□□ -0.23
TCF4-236ENST00000567880 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
TCF4-236ENST00000567880 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
TCF4-236ENST00000567880 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
TCF4-236ENST00000567880 WDR17Q8IZU2 1322 aa13.63□□□□□ -0.23
TCF4-236ENST00000567880 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
TCF4-236ENST00000567880 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
TCF4-236ENST00000567880 JCADQ9P266 1359 aa13.62□□□□□ -0.23
TCF4-236ENST00000567880 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
TCF4-236ENST00000567880 SUPT16HQ9Y5B9 1047 aaKnown RBP13.62□□□□□ -0.23
TCF4-236ENST00000567880 HSPA1LP34931 641 aa13.61□□□□□ -0.23
TCF4-236ENST00000567880 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
TCF4-236ENST00000567880 NBR1Q14596 966 aa13.6□□□□□ -0.23
TCF4-236ENST00000567880 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
TCF4-236ENST00000567880 MCM10Q7L590 875 aa13.6□□□□□ -0.23
TCF4-236ENST00000567880 BBXQ8WY36 941 aaPredicted RBP13.6□□□□□ -0.23
TCF4-236ENST00000567880 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
TCF4-236ENST00000567880 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
TCF4-236ENST00000567880 PARP4Q9UKK3 1724 aaKnown RBP13.59□□□□□ -0.23
TCF4-236ENST00000567880 MEGF6O75095 1541 aa13.59□□□□□ -0.23
TCF4-236ENST00000567880 PLEKHO1Q53GL0 409 aaPredicted RBP13.59□□□□□ -0.23
TCF4-236ENST00000567880 TRMT2AQ8IZ69 625 aaKnown RBP13.59□□□□□ -0.23
TCF4-236ENST00000567880 TSR2Q969E8 191 aaKnown RBP13.59□□□□□ -0.23
TCF4-236ENST00000567880 MYH16Q9H6N6 1097 aa13.59□□□□□ -0.23
TCF4-236ENST00000567880 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
TCF4-236ENST00000567880 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
TCF4-236ENST00000567880 MAP3K5Q99683 1374 aa13.59□□□□□ -0.23
TCF4-236ENST00000567880 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.23
TCF4-236ENST00000567880 NRAPQ86VF7 1730 aa13.58□□□□□ -0.24
TCF4-236ENST00000567880 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
TCF4-236ENST00000567880 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
TCF4-236ENST00000567880 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
TCF4-236ENST00000567880 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
TCF4-236ENST00000567880 IL16Q14005 1332 aa13.58□□□□□ -0.24
TCF4-236ENST00000567880 AMOTQ4VCS5 1084 aa13.57□□□□□ -0.24
TCF4-236ENST00000567880 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
TCF4-236ENST00000567880 CRB1P82279 1406 aa13.57□□□□□ -0.24
TCF4-236ENST00000567880 PKD1L3Q7Z443 1732 aa13.57□□□□□ -0.24
TCF4-236ENST00000567880 NWD2Q9ULI1 1742 aa13.57□□□□□ -0.24
TCF4-236ENST00000567880 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
TCF4-236ENST00000567880 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
TCF4-236ENST00000567880 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
TCF4-236ENST00000567880 LRRC37A3O60309 1634 aa13.55□□□□□ -0.24
TCF4-236ENST00000567880 C8orf37Q96NL8 207 aa13.55□□□□□ -0.24
TCF4-236ENST00000567880 SPATA31A6Q5VVP1 1343 aa13.55□□□□□ -0.24
TCF4-236ENST00000567880 GNAI1P63096 354 aa13.54□□□□□ -0.24
TCF4-236ENST00000567880 AKAP4Q5JQC9 854 aa13.54□□□□□ -0.24
TCF4-236ENST00000567880 IFT57Q9NWB7 429 aa13.54□□□□□ -0.24
TCF4-236ENST00000567880 SPG7Q9UQ90 795 aa13.54□□□□□ -0.24
TCF4-236ENST00000567880 LRP6O75581 1613 aa13.54□□□□□ -0.24
TCF4-236ENST00000567880 WNK3Q9BYP7 1800 aa13.54□□□□□ -0.24
TCF4-236ENST00000567880 HTATSF1O43719 755 aaKnown RBP13.54□□□□□ -0.24
TCF4-236ENST00000567880 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
TCF4-236ENST00000567880 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 NEFLP07196 543 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 IL2RBP14784 551 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 SCN11AQ9UI33 1791 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
TCF4-236ENST00000567880 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.24
TCF4-236ENST00000567880 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.24
TCF4-236ENST00000567880 MPRIPQ6WCQ1 1025 aa13.52□□□□□ -0.24
TCF4-236ENST00000567880 SLIT2O94813 1529 aa13.52□□□□□ -0.24
TCF4-236ENST00000567880 ZNF853P0CG23 659 aa13.52□□□□□ -0.25
TCF4-236ENST00000567880 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
TCF4-236ENST00000567880 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
TCF4-236ENST00000567880 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.25
TCF4-236ENST00000567880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
TCF4-236ENST00000567880 MIS18AQ9NYP9 233 aa13.51□□□□□ -0.25
TCF4-236ENST00000567880 PHKG2P15735 406 aa13.5□□□□□ -0.25
TCF4-236ENST00000567880 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
TCF4-236ENST00000567880 ZCRB1Q8TBF4 217 aaKnown RBP13.5□□□□□ -0.25
TCF4-236ENST00000567880 CEMIPQ8WUJ3 1361 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 PLEKHG2Q9H7P9 1386 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
TCF4-236ENST00000567880 CHL1O00533 1208 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 CYP27B1O15528 508 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 RNMTO43148 476 aaKnown RBP13.49□□□□□ -0.25
TCF4-236ENST00000567880 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 ADAMTS7Q9UKP4 1686 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 ELL2O00472 640 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms