RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 KIF7Q2M1P5 1343 aa9.82□□□□□ -0.84
SMPD3-210ENST00000567811 TNS2Q63HR2 1409 aa9.82□□□□□ -0.84
SMPD3-210ENST00000567811 SYTL4Q96C24 671 aaPredicted RBP9.82□□□□□ -0.84
SMPD3-210ENST00000567811 EYA1Q99502 592 aa9.82□□□□□ -0.84
SMPD3-210ENST00000567811 RREB1Q92766 1687 aa9.81□□□□□ -0.84
SMPD3-210ENST00000567811 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
SMPD3-210ENST00000567811 ANKRD26Q9UPS8 1709 aa9.81□□□□□ -0.84
SMPD3-210ENST00000567811 BTAF1O14981 1849 aa9.8□□□□□ -0.84
SMPD3-210ENST00000567811 NUP188Q5SRE5 1749 aa9.8□□□□□ -0.84
SMPD3-210ENST00000567811 EIF4A2Q14240 407 aaKnown RBP9.8□□□□□ -0.84
SMPD3-210ENST00000567811 STK32BQ9NY57 414 aa9.8□□□□□ -0.84
SMPD3-210ENST00000567811 SPG7Q9UQ90 795 aa9.8□□□□□ -0.84
SMPD3-210ENST00000567811 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
SMPD3-210ENST00000567811 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
SMPD3-210ENST00000567811 NSD2O96028 1365 aa9.79□□□□□ -0.84
SMPD3-210ENST00000567811 SLC15A2Q16348 729 aa9.79□□□□□ -0.84
SMPD3-210ENST00000567811 AMER1Q5JTC6 1135 aaPredicted RBP9.79□□□□□ -0.84
SMPD3-210ENST00000567811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMPD3-210ENST00000567811 NHSQ6T4R5 1651 aa9.79□□□□□ -0.84
SMPD3-210ENST00000567811 MEGF6O75095 1541 aa9.78□□□□□ -0.84
SMPD3-210ENST00000567811 CYP27B1O15528 508 aa9.78□□□□□ -0.84
SMPD3-210ENST00000567811 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
SMPD3-210ENST00000567811 SPON1Q9HCB6 807 aa9.78□□□□□ -0.84
SMPD3-210ENST00000567811 PCDH11XQ9BZA7 1347 aa9.78□□□□□ -0.84
SMPD3-210ENST00000567811 PCDH11YQ9BZA8 1340 aa9.78□□□□□ -0.84
SMPD3-210ENST00000567811 SHANK3Q9BYB0 1731 aa9.77□□□□□ -0.85
SMPD3-210ENST00000567811 HMGB2P26583 209 aaKnown RBP9.77□□□□□ -0.85
SMPD3-210ENST00000567811 MTHFSP49914 203 aa9.77□□□□□ -0.85
SMPD3-210ENST00000567811 NKX1-1Q15270 411 aaPredicted RBP9.77□□□□□ -0.85
SMPD3-210ENST00000567811 CC2D1BQ5T0F9 858 aaKnown RBP9.77□□□□□ -0.85
SMPD3-210ENST00000567811 MPRIPQ6WCQ1 1025 aa9.77□□□□□ -0.85
SMPD3-210ENST00000567811 IFNL2Q8IZJ0 200 aa9.77□□□□□ -0.85
SMPD3-210ENST00000567811 ANO8Q9HCE9 1232 aaPredicted RBP9.77□□□□□ -0.85
SMPD3-210ENST00000567811 LRRC4BQ9NT99 713 aa9.77□□□□□ -0.85
SMPD3-210ENST00000567811 ITGB4P16144 1822 aa9.77□□□□□ -0.85
SMPD3-210ENST00000567811 PLEKHO1Q53GL0 409 aaPredicted RBP9.76□□□□□ -0.85
SMPD3-210ENST00000567811 KCNQ4P56696 695 aa9.75□□□□□ -0.85
SMPD3-210ENST00000567811 CNGB1Q14028 1251 aaPredicted RBP9.75□□□□□ -0.85
SMPD3-210ENST00000567811 PDGFDQ9GZP0 370 aaPredicted RBP9.75□□□□□ -0.85
SMPD3-210ENST00000567811 ATF5Q9Y2D1 282 aaPredicted RBP9.75□□□□□ -0.85
SMPD3-210ENST00000567811 PHKG2P15735 406 aa9.74□□□□□ -0.85
SMPD3-210ENST00000567811 IL13P35225 146 aa9.74□□□□□ -0.85
SMPD3-210ENST00000567811 AMOTQ4VCS5 1084 aa9.74□□□□□ -0.85
SMPD3-210ENST00000567811 SMARCC1Q92922 1105 aaPredicted RBP9.74□□□□□ -0.85
SMPD3-210ENST00000567811 PPP1R1BQ9UD71 204 aaPredicted RBP9.74□□□□□ -0.85
SMPD3-210ENST00000567811 CCNL1Q9UK58 526 aaPredicted RBP9.74□□□□□ -0.85
SMPD3-210ENST00000567811 IGSF1Q8N6C5 1336 aa9.74□□□□□ -0.85
SMPD3-210ENST00000567811 LRP5O75197 1615 aa9.74□□□□□ -0.85
SMPD3-210ENST00000567811 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
SMPD3-210ENST00000567811 DOT1LQ8TEK3 1739 aa9.73□□□□□ -0.85
SMPD3-210ENST00000567811 ZBTB7AO95365 584 aa9.73□□□□□ -0.85
SMPD3-210ENST00000567811 HSP90AB1P08238 724 aaKnown RBP9.73□□□□□ -0.85
SMPD3-210ENST00000567811 SULT6B1Q6IMI4 303 aa9.73□□□□□ -0.85
SMPD3-210ENST00000567811 PIGBQ92521 554 aa9.73□□□□□ -0.85
SMPD3-210ENST00000567811 AKT1S1Q96B36 256 aa9.73□□□□□ -0.85
SMPD3-210ENST00000567811 LY75O60449 1722 aa9.73□□□□□ -0.85
SMPD3-210ENST00000567811 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
SMPD3-210ENST00000567811 DIAPH1O60610 1272 aaKnown RBP9.72□□□□□ -0.85
SMPD3-210ENST00000567811 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
SMPD3-210ENST00000567811 TMOD3Q9NYL9 352 aa9.72□□□□□ -0.85
SMPD3-210ENST00000567811 TFCP2L1Q9NZI6 479 aa9.72□□□□□ -0.85
SMPD3-210ENST00000567811 PKD1L3Q7Z443 1732 aa9.72□□□□□ -0.85
SMPD3-210ENST00000567811 ZNF827Q17R98 1081 aa9.71□□□□□ -0.86
SMPD3-210ENST00000567811 AEBP1Q8IUX7 1158 aa9.71□□□□□ -0.86
SMPD3-210ENST00000567811 DCAF5Q96JK2 942 aa9.71□□□□□ -0.86
SMPD3-210ENST00000567811 MTFR1LQ9H019 292 aa9.71□□□□□ -0.86
SMPD3-210ENST00000567811 NPC1L1Q9UHC9 1359 aa9.71□□□□□ -0.86
SMPD3-210ENST00000567811 C1orf141Q5JVX7 400 aa9.7□□□□□ -0.86
SMPD3-210ENST00000567811 ZNF530Q6P9A1 599 aaPredicted RBP9.7□□□□□ -0.86
SMPD3-210ENST00000567811 ASAP1Q9ULH1 1129 aa9.7□□□□□ -0.86
SMPD3-210ENST00000567811 DCAF8L1A6NGE4 600 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 HMOX1P09601 288 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 PTGER2P43116 358 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 CABP4P57796 275 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 TAF1LQ8IZX4 1826 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 PLEKHG2Q9H7P9 1386 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 ATG3Q9NT62 314 aa9.69□□□□□ -0.86
SMPD3-210ENST00000567811 PALLDQ8WX93 1383 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 LOC102724428A0A0B4J2F2 783 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 MSH5O43196 834 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 SIK1P57059 783 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 COL23A1Q86Y22 540 aaPredicted RBP9.68□□□□□ -0.86
SMPD3-210ENST00000567811 NFATC2IPQ8NCF5 419 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 FLAD1Q8NFF5 587 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 QSER1Q2KHR3 1735 aa9.68□□□□□ -0.86
SMPD3-210ENST00000567811 PNPLA7Q6ZV29 1317 aa9.67□□□□□ -0.86
SMPD3-210ENST00000567811 SRCAPQ6ZRS2 3230 aa9.67□□□□□ -0.86
SMPD3-210ENST00000567811 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
SMPD3-210ENST00000567811 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
SMPD3-210ENST00000567811 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
SMPD3-210ENST00000567811 ARXQ96QS3 562 aa9.67□□□□□ -0.86
SMPD3-210ENST00000567811 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
SMPD3-210ENST00000567811 TOGARAM1Q9Y4F4 1720 aa9.67□□□□□ -0.86
SMPD3-210ENST00000567811 KDRP35968 1356 aa9.66□□□□□ -0.86
SMPD3-210ENST00000567811 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
SMPD3-210ENST00000567811 POLD1P28340 1107 aa9.66□□□□□ -0.86
SMPD3-210ENST00000567811 SYT17Q9BSW7 474 aa9.66□□□□□ -0.86
SMPD3-210ENST00000567811 RBM42Q9BTD8 480 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms