RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ZC3H13Q5T200 1668 aaKnown RBP8.2□□□□□ -1.1
SF3B3-210ENST00000567654 CLK2P49760 499 aaKnown RBP8.19□□□□□ -1.1
SF3B3-210ENST00000567654 USP46P62068 366 aa8.19□□□□□ -1.1
SF3B3-210ENST00000567654 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
SF3B3-210ENST00000567654 TJAP1Q5JTD0 557 aa8.19□□□□□ -1.1
SF3B3-210ENST00000567654 RNF19BQ6ZMZ0 732 aa8.19□□□□□ -1.1
SF3B3-210ENST00000567654 HIRIP3Q9BW71 556 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-210ENST00000567654 COL17A1Q9UMD9 1497 aaPredicted RBP8.19□□□□□ -1.1
SF3B3-210ENST00000567654 LMTK2Q8IWU2 1503 aa8.19□□□□□ -1.1
SF3B3-210ENST00000567654 SKIV2LQ15477 1246 aaKnown RBP8.18□□□□□ -1.1
SF3B3-210ENST00000567654 NYAP1Q6ZVC0 841 aa8.18□□□□□ -1.1
SF3B3-210ENST00000567654 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
SF3B3-210ENST00000567654 CABLES1Q8TDN4 633 aa8.18□□□□□ -1.1
SF3B3-210ENST00000567654 RSPH6AQ9H0K4 717 aa8.18□□□□□ -1.1
SF3B3-210ENST00000567654 ABCC3O15438 1527 aa8.18□□□□□ -1.1
SF3B3-210ENST00000567654 MADDQ8WXG6 1647 aa8.18□□□□□ -1.1
SF3B3-210ENST00000567654 KIF3BO15066 747 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 SPTLC1O15269 473 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 QPCTQ16769 361 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 GRIPAP1Q4V328 841 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 REREQ9P2R6 1566 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 CLTCQ00610 1675 aaKnown RBP8.17□□□□□ -1.1
SF3B3-210ENST00000567654 PREX1Q8TCU6 1659 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 PPLO60437 1756 aa8.17□□□□□ -1.1
SF3B3-210ENST00000567654 CCDC144AA2RUR9 1427 aa8.16□□□□□ -1.1
SF3B3-210ENST00000567654 PIK3C2BO00750 1634 aa8.16□□□□□ -1.1
SF3B3-210ENST00000567654 PTPRTO14522 1441 aa8.16□□□□□ -1.1
SF3B3-210ENST00000567654 SYNMO15061 1565 aa8.16□□□□□ -1.1
SF3B3-210ENST00000567654 TMEM132AQ24JP5 1023 aa8.16□□□□□ -1.1
SF3B3-210ENST00000567654 UHRF1BP1Q6BDS2 1440 aa8.16□□□□□ -1.1
SF3B3-210ENST00000567654 ARHGEF40Q8TER5 1519 aa8.16□□□□□ -1.1
SF3B3-210ENST00000567654 RALGAPBQ86X10 1494 aa8.15□□□□□ -1.1
SF3B3-210ENST00000567654 C6orf229H3BNL8 230 aa8.15□□□□□ -1.1
SF3B3-210ENST00000567654 ZPR1O75312 459 aa8.15□□□□□ -1.1
SF3B3-210ENST00000567654 NR1I2O75469 434 aa8.15□□□□□ -1.1
SF3B3-210ENST00000567654 PCMTD1Q96MG8 357 aaPredicted RBP8.15□□□□□ -1.1
SF3B3-210ENST00000567654 IQGAP1P46940 1657 aa8.14□□□□□ -1.11
SF3B3-210ENST00000567654 LAMC1P11047 1609 aa8.14□□□□□ -1.11
SF3B3-210ENST00000567654 SPATA31E1Q6ZUB1 1445 aa8.14□□□□□ -1.11
SF3B3-210ENST00000567654 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
SF3B3-210ENST00000567654 IL21Q9HBE4 155 aa8.14□□□□□ -1.11
SF3B3-210ENST00000567654 KIAA1210Q9ULL0 1709 aa8.13□□□□□ -1.11
SF3B3-210ENST00000567654 THAP11Q96EK4 314 aa8.13□□□□□ -1.11
SF3B3-210ENST00000567654 PRDM9Q9NQV7 894 aa8.13□□□□□ -1.11
SF3B3-210ENST00000567654 NEURL4Q96JN8 1562 aa8.13□□□□□ -1.11
SF3B3-210ENST00000567654 NPATQ14207 1427 aa8.12□□□□□ -1.11
SF3B3-210ENST00000567654 PRAG1Q86YV5 1406 aa8.12□□□□□ -1.11
SF3B3-210ENST00000567654 KANK1Q14678 1352 aa8.12□□□□□ -1.11
SF3B3-210ENST00000567654 NUTM2BA6NNL0 878 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-210ENST00000567654 NUTM2EB1AL46 878 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-210ENST00000567654 HSPA5P11021 654 aaKnown RBP8.12□□□□□ -1.11
SF3B3-210ENST00000567654 NUTM2DQ5VT03 806 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-210ENST00000567654 BRICD5Q6PL45 260 aa8.12□□□□□ -1.11
SF3B3-210ENST00000567654 NUTM2AQ8IVF1 878 aaPredicted RBP8.12□□□□□ -1.11
SF3B3-210ENST00000567654 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.12□□□□□ -1.11
SF3B3-210ENST00000567654 ADGRB3O60242 1522 aa8.12□□□□□ -1.11
SF3B3-210ENST00000567654 FMNL1O95466 1100 aaPredicted RBP8.11□□□□□ -1.11
SF3B3-210ENST00000567654 KCNC4Q03721 635 aa8.11□□□□□ -1.11
SF3B3-210ENST00000567654 MTMR2Q13614 643 aa8.11□□□□□ -1.11
SF3B3-210ENST00000567654 TSC1Q92574 1164 aa8.11□□□□□ -1.11
SF3B3-210ENST00000567654 SPSB2Q99619 263 aa8.11□□□□□ -1.11
SF3B3-210ENST00000567654 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
SF3B3-210ENST00000567654 AGLP35573 1532 aa8.11□□□□□ -1.11
SF3B3-210ENST00000567654 CFAP99D6REC4 459 aa8.1□□□□□ -1.11
SF3B3-210ENST00000567654 LILRB3O75022 631 aa8.1□□□□□ -1.11
SF3B3-210ENST00000567654 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-210ENST00000567654 ZNF326Q5BKZ1 582 aaKnown RBP8.1□□□□□ -1.11
SF3B3-210ENST00000567654 GGT6Q6P531 493 aa8.1□□□□□ -1.11
SF3B3-210ENST00000567654 FAM160A2Q8N612 972 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-210ENST00000567654 ZBTB3Q9H5J0 574 aa8.1□□□□□ -1.11
SF3B3-210ENST00000567654 C11orf95C9JLR9 678 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-210ENST00000567654 GJA5P36382 358 aa8.09□□□□□ -1.11
SF3B3-210ENST00000567654 Q3C1V9 767 aa8.09□□□□□ -1.11
SF3B3-210ENST00000567654 RGL3Q3MIN7 710 aa8.09□□□□□ -1.11
SF3B3-210ENST00000567654 PRR7Q8TB68 274 aa8.09□□□□□ -1.11
SF3B3-210ENST00000567654 DCAF11Q8TEB1 546 aa8.09□□□□□ -1.11
SF3B3-210ENST00000567654 USB1Q9BQ65 265 aaKnown RBP8.09□□□□□ -1.11
SF3B3-210ENST00000567654 WASHC2AQ641Q2 1341 aa8.08□□□□□ -1.12
SF3B3-210ENST00000567654 TMEM131LA2VDJ0 1609 aa8.08□□□□□ -1.12
SF3B3-210ENST00000567654 S1PR4O95977 384 aa8.08□□□□□ -1.12
SF3B3-210ENST00000567654 ADH1BP00325 375 aa8.08□□□□□ -1.12
SF3B3-210ENST00000567654 DDX10Q13206 875 aaKnown RBP8.08□□□□□ -1.12
SF3B3-210ENST00000567654 PLA2G2EQ9NZK7 142 aa8.08□□□□□ -1.12
SF3B3-210ENST00000567654 NOS1P29475 1434 aa8.08□□□□□ -1.12
SF3B3-210ENST00000567654 USP47Q96K76 1375 aa8.08□□□□□ -1.12
SF3B3-210ENST00000567654 PPEF1O14829 653 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-210ENST00000567654 RFC5P40937 340 aa8.07□□□□□ -1.12
SF3B3-210ENST00000567654 EIF4G2P78344 907 aaKnown RBP eCLIP8.07□□□□□ -1.12
SF3B3-210ENST00000567654 TUSC1Q2TAM9 212 aa8.07□□□□□ -1.12
SF3B3-210ENST00000567654 RETREG3Q86VR2 466 aa8.07□□□□□ -1.12
SF3B3-210ENST00000567654 NEXMIFQ5QGS0 1516 aa8.07□□□□□ -1.12
SF3B3-210ENST00000567654 FER1L4A9Z1Z3 1794 aa8.07□□□□□ -1.12
SF3B3-210ENST00000567654 ARHGAP31Q2M1Z3 1444 aa8.06□□□□□ -1.12
SF3B3-210ENST00000567654 CNTLNQ9NXG0 1405 aa8.06□□□□□ -1.12
SF3B3-210ENST00000567654 PRPF38BQ5VTL8 546 aaKnown RBP8.06□□□□□ -1.12
SF3B3-210ENST00000567654 SALL2Q9Y467 1007 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-210ENST00000567654 CCDC7Q96M83 1385 aa8.06□□□□□ -1.12
SF3B3-210ENST00000567654 MYOM2P54296 1465 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms